Lhum002176.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- CEF1
- Assembly
- GCA_000217595.1
- Location
- NW:430603-434229[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.19 1.3e+02 2.1 0.0 3 17 165 179 163 186 0.91 2 6 2.3 1.6e+03 -1.4 0.0 23 46 233 258 219 258 0.69 3 6 3.1e-12 2.1e-09 36.7 0.3 1 45 264 310 264 311 0.95 4 6 9.7e-09 6.6e-06 25.4 0.4 3 43 319 363 317 365 0.96 5 6 7.5e-13 5.1e-10 38.6 0.0 1 44 372 416 372 418 0.94 6 6 9.5e-16 6.5e-13 47.9 0.2 1 43 424 466 424 469 0.95
Sequence Information
- Coding Sequence
- ATGATGAGTGATTCCGACGACTCTGACATTTTGGCTGATATCCAGGCCTTGGATCGAGTTCTGACCACGACTTCACAGGAAAATGTACAATATCCTAGTAGCAGTAAAGTGCAATTTGATAATGTTTACTCGACAGAGATTGATTCGGATGTTGAGAGCGACAACTTCTCCAACTTTGTTAAAGAGAATTGTGATGCCAACATAAACTCTCTTAACGCTTTTGAAATTAACATGAAATTGATAACAGGTTTGACGATAGTCAAGAACAAATTTAGTGTCATGCTGCGACAGTGTGAAGAAAAGATAAAGCAATTAGACCAAGAGCTAGAAAACAGCAGTAAAGAAAGCAATAGATGTTCTAAATTGCCAATCAGCCATGCTGGTATGCCATATTTCAAGGACAAGGATTACTTTTATGTTCCTAAAAATTCTGacacaatattaaaagaagCACGTGGTGAATTATTTGTTGTATATATGCAGAAACCAAGTCGTTGGTCAGATAAGGATAGACAAACTCTTCTAAGGGCTGTGCATAATGAAGCATTCGAATCAGTTCTATCCAGAGGATTTGACAAACAAGTAGATAGTAGAAAGTCCAAACGTAAAGAAAACAACCAAGCTGAGGAAGCCAAGTTGGTGCTTCccagaaattttaatgaaatggtAGGAGCATTAGGCGAGAGAGAATTTGACTGGCTTAAAATTTCGAATGTGgattttgataataaacatTCCGCGGGTGAATGTCGGGCTATGTGGAACGTCTACCTGCATCCGGATATCAGGAAAACCGAATGGACAGCCGCGGAGGACAAGAAACTGATAAAATATGCTAAGTTATGTAAATATCAAGATTGGGACACTATCACGCAGAAACTGGGAACGAATCGCAGCGCTTACCAATGTTTCATTAGATATAATACTATCAAGGCAGTGCCATCCTCCGGACTTACCTGGACGAAGCAGGAAGACAAGCATCTCCTAAGAGTCATAGAGACACTCAGGGTCGGAAATTACATCCCTTGGTTTGAAGTTGCAAATTACTTGCGGCACAGAACTAAGCAGCAAATTTACACACGATGGATATACAGGACAGCGCCGCATTTGAAGAAGGGTAGATTTACCTTAGCGGAAACGCAGCAACttttttgtgcaataaaaaagtaCGGCAAGGACTTTCGTAAAATCGCGCACGTTGTGATGCCGAATCGAACTTCCTCACAACTCATCAATCGTTACAACACAATAATCACGAAGGCGAATGGCAGGAATTTATGGACAGCGGAGACCGACATGCAATTGATTCAGCTGCACAAAAAGCACGGTAACAACTGGTCCTATATAGCCAAGTATTTTTCTGGCAAAACAAGAACACAGGTGAGACATCGGTTTAATGCGATACTAAAATACGTGCAGAGAGGTATTTCCATAGACAACATACCTAGAGCATCTGCCCCTAAAAAAGTGCGTTACAAGAAATCTGAACACAGCACCATGTCAGaatataacaaaaagatattaatggAAAAACTTCTTGAGAAAGCCAAGCATCGTACTGTAGACACTAATGATATTGAGCCGAGACTGTACGAAACTCTTGTGTTTCCACCTTCGTCGGAATCCGCTACTCAGGAAGAACCttataactttaaattacTTGCACGTGAAACTAGAAAGTTATACAATACATTGGAATTATTAGGCGCTAAGCTTGATATTCCTATggattttctaaattatatgcACCTAAATAAAAGAGACAAAGAACTCGTGACttctttaaaagaatatataaatattaaaaataataaaacgcagAATAGCAATGTGATAGAAGAATTTAGAACGCGAATGTTTGGCCCTGAACTGACAGTTGATGAAACTTCTCGCTTTATACCGCCACTTCCGTTTAACGGATACGTAAGACAgacaaaaaaagtaagaaaaaaggaCAAAGTTATAGATTGCAACTTAGGGGACGATAAACATCTTATTACCGATGTACCTGTAGAATTTTTTCCGTGTACGCTTTCATTGTCTTTTCTTAGTTTCGAGGAAAGAAttcaatttgataaatttagtcAGTTCTTCGCGAATGATTATCACGAGAAGcgaaatgtaaatttacacaaatcaTTACAATGCAACTCCTCTTTCGATGGATCAAGGAGTTCATTATCAAGACGTAGCAAATCAAATACGAATTCGAAAGTAAGTTCAAGAAGTTGCACACAAGTACAACAATCAGATAACTTAGAAGAAACCATCAGTACTGAATACgatgaaaatgaagaaaatacgTGGGATAATATAATTCTGCCAAACAACGCAACTTTATTAGGTTGGAAAAACTTGCTTGTTTGGAAATTGTTGTACGAATGTGAAAATGAATTTGACGCATCCGATGAATCTAACGAATTGTCATCGGAGAAACAATCGGAAGAACGTGCTGAATCTGAAGACGAATGTGAAAGTGCTGAATACCAGCTGCTACGAACGCGCctcttaaaattattcaaatttcctGTAGGTTTGTCAAACACTATATTAGAAATAACTAAACCagacatatttttaacaaacgaGGAACAGCATCCCGTTCATGAAAACActtcaagaaaaagaaaatttgttaaacgTGTATCCAAGagaaaaaaggtaaaaaataacGATGTCTTTTGA
- Protein Sequence
- MMSDSDDSDILADIQALDRVLTTTSQENVQYPSSSKVQFDNVYSTEIDSDVESDNFSNFVKENCDANINSLNAFEINMKLITGLTIVKNKFSVMLRQCEEKIKQLDQELENSSKESNRCSKLPISHAGMPYFKDKDYFYVPKNSDTILKEARGELFVVYMQKPSRWSDKDRQTLLRAVHNEAFESVLSRGFDKQVDSRKSKRKENNQAEEAKLVLPRNFNEMVGALGEREFDWLKISNVDFDNKHSAGECRAMWNVYLHPDIRKTEWTAAEDKKLIKYAKLCKYQDWDTITQKLGTNRSAYQCFIRYNTIKAVPSSGLTWTKQEDKHLLRVIETLRVGNYIPWFEVANYLRHRTKQQIYTRWIYRTAPHLKKGRFTLAETQQLFCAIKKYGKDFRKIAHVVMPNRTSSQLINRYNTIITKANGRNLWTAETDMQLIQLHKKHGNNWSYIAKYFSGKTRTQVRHRFNAILKYVQRGISIDNIPRASAPKKVRYKKSEHSTMSEYNKKILMEKLLEKAKHRTVDTNDIEPRLYETLVFPPSSESATQEEPYNFKLLARETRKLYNTLELLGAKLDIPMDFLNYMHLNKRDKELVTSLKEYINIKNNKTQNSNVIEEFRTRMFGPELTVDETSRFIPPLPFNGYVRQTKKVRKKDKVIDCNLGDDKHLITDVPVEFFPCTLSLSFLSFEERIQFDKFSQFFANDYHEKRNVNLHKSLQCNSSFDGSRSSLSRRSKSNTNSKVSSRSCTQVQQSDNLEETISTEYDENEENTWDNIILPNNATLLGWKNLLVWKLLYECENEFDASDESNELSSEKQSEERAESEDECESAEYQLLRTRLLKLFKFPVGLSNTILEITKPDIFLTNEEQHPVHENTSRKRKFVKRVSKRKKVKNNDVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -