Lhum003694.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Linepithema humile
Gene Symbol
ct
Assembly
GCA_000217595.1
Location
NW:5817838-5932794[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6e-28 3.3e-24 84.0 0.0 2 72 556 627 555 632 0.95
2 3 1.4e-32 7.8e-29 98.8 0.0 3 77 961 1036 959 1038 0.96
3 3 5.9e-31 3.2e-27 93.7 0.0 3 75 1193 1266 1191 1270 0.95

Sequence Information

Coding Sequence
ATGTACTATTTACTACACATAGTTTCATATCTAGAAGATCGGATTCATAAAATGGTAGAAGTGTCGGACGCAAGTGAGCATCATCCTTTGTTTCTCCGATGGAGTCAACGGATTCCTTCAGCCGGAGTTTACCAAATTTACTCACATTGGCTgAGAGCAACTTCGGCGGAGAAAGAAATAGCCGCGCTGAAAGAACAGCTCGCCGCAACGAATGACAGCAATTCCAAGACTGAGGGACACCAATTGTCTCAGCCTCCGCAGGGAAGCGATCAACAGCAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACAGCAACCTCGAGCAGGAGCTGCAGGCCAAAGACAAAGAGaTCAATCAGCTGGTTGAGGAGGTATCTAGACTACAGCAGAGTCTGCAACGCCTTCAGGAGACAAGCGCGCAAGCAACGGCGCGGCTGGAGGAGGAACTTGAAGTACGCAGGCAACACATCAGCAGACTGGAGAGCAAATTAGAGCGGCAAAGGGATTATGACGACTTGAAGCGCGAGATCAGCGTGCTGAGGTCAGTCGATCTCTCGCAGATACCAACCGGTGAACCTGGAAAGAGCTTAGAACATCTTCTTATGGAGCGCTTCAAGGCGCTTCAACAGGCCGAAAATCTGAAACCCTCCAACACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAACAACCACCGCCACCTCCAACAGCAGTCTCCCTCCCCCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAACGTCGAGACTTTTGGCTCGTTCCTCGGTGAAGAAATCGTCGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATAAgccagcagcagcaacaacagcaacagcagcagcagcagcagcagcagcaaccgCAGCAGCCGCCGTCGCAATCGTCTCAATTAAGCCAATTAACtcaacagcagcaacaattGCAACAAGCCCAACCGCACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCGTCACCGGGCACAGATCCGTCATCCACCTCGAACACACCGGCCAAGTCGAACACGCCGATCGGCACGACACCCCTGGGCAATCTAGAGGTGACAGAAAAGGCGCCGACGCCGGTATCGGGACACGAGACGCCGGCACCGCCGACGCCATCCTCCACAACCGCCTTAACATCGCCGCCGAGCTTCCAGCCACCTACGTCAATGGTGGAGACCAGCAATCCTTCGGCTTCCATCAACGGCGGCGGTCTGACGCCTGGCGTGCCGAGCGCACCGCCGCCGAAAAGCCCGGCCGATCAGGAATCATGTCACAACAATAACAATAGCCATCATCTGGCGAACAATAACATCGGCGGCCTGAGCGTTCTCGACCAGCTGAAGAGTCCGTTTCGGTTCGACGATCGAACGTATCCCTTCCGATTCGGCGACGAGTTCGGCGCCGCCGGTATGGCCGGTCGACTTGGCGAATCCCTCATACCGAAGGGCGATCCGATGGAGGCGAGACTGCAGGAGATGCTGCGTCATAATATGGACAAATACGCCTCGCAGAATCTCGACACTCTTCACATAGCCAGACGGGTGCGCGAGCTGCTGTCGATACACAATATCGGTCAGAGACTGTTCGCCAAGTACGTTCTTGGGCTGAGCCAAGGCACGGTTAGCGAGTTGCTTAGCAAACCGAAGCCGTGGGATAAGCTGACCGAGAAGGGCCGTGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTATTGCTGCTCAAGTCTCTGATCCCCAAGAAAGGCAAGGAGCAGGGAATGCCAGCGTTCGCACGTGGACCACAGGATGGTGGTCCGCCGGAAATAAGTGACGAAAGATTGGCGCATATACTCTCGGAGACGGGCCATATGCAAATGCGGGGTGAGCACGAGGTGTCGAACGACGCCGACAGCAAGAGTCCGAGTAGAATCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTAGTGAGGATTTATCAGGAGGAACTGGCCAAGCTGATGGGCAGGAGGGTGGAGGATCTCCGCCCGCGAGAGTTCCCTAGTGCGATCTTTCCACATTTTTTCAGTGGCGCTCAAGGTGGTCTTCAAGGCATCGAACGCACCCAGGAAGACATCCGAATGGCATTGGATGCCTATCACCGTGAACTTCAAAAGTTGAATGCCGCGCCGGGTCAGAATTCTTCGATGACCGGATTGCCGGGACTGCCTGGACTTCCAGGCCTGCTGGCGTTGCAGCAACAAGCTCTTCAGCAACATCATTTGGCCGcgaacggcggcggcggtgttCAGGACTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaacggCGTGTCggaagaggagaaagagaagatgGAGGAGGCGATGAGACATGCCGGAAGTGCGTTCTCTCTGGTGAGGCCGAAACAGGAATCGACAGGGCCGCAGTCGACGCCCGGCGGTTCCAGCGCAAGTTCGCCGCTCGGCAATTCCATACTTCCTCCCGCGATGACACCCAACGAGGAATTTTCCGGCGCGGCGGCAGCCAGTCCTCTACAGAGGATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACGCCAACTCACCACTCGGCCAATCAAAGGCCGCTGAAAGCCGTGCTTCCTCCGATCACGCAGCAACAGTTCGATCTTTACAATAATCTCAACACCGAAGACATCGTCAAGAGGGTGAAAGAACAGCTGTCTCAGTATTCAATTTCACAACGGCTATTCGGTGAATCAGTATTGGGTCTGTCTCAGGGATCGGTATCAGACCTCCTCGCTCGCCCTAAACCATGGCATATGCTGACCCAGAAGGGTCGCGAGCCCTTCATTCGAATGAAGATGTTCCTCGAGGATGACAACGCGGTTCACAAACTGGTAGCCAGCCAGTACAAAATCGCTCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGCGGAACACCCATGAAACCTATGCCGCCAACGAAACTCGTCCAAGAACAACTTCAAAATGCGGCGAAAGCACAAGCCGCCGCCGCTCAAGCGGCCGCGCAAGCGGCAGCGCAACAGCATCAGCAGGAGAATCAGATGCAACTCGGTCCGCCTCAACAAAGCCCTCAGCTTCCTCAGCATCcacagccgccgccgccgatgATGTTGACTCCGCCCGGACCCCATCATCCTCATACTCAGCTCAGCATGCAGGAACTGCAGAAgaaacagcagcaacagcaacagcaaaTGTCATTGCACTCGCCGCATCATCAAATGGCACCGTCGCCTCTTCGAAGTCTCCATCCGCATATTTCACCGAGCGTGTACGAAATGGCTGCGCTTACGCAGGATCTCGACACACAGACAATTACTACGAAGATCAAGGAAGCGTTATTGGCGAACAATATCGGCCAGAAGATCTTCGGTGAAGCGGTTCTTGGCCTGTCGCAGGGTTCCGTCAGTGAATTGCTGAGTAAACCGAAACCGTGGCATATGCTAAGCATAAAAGGCCGCGAGCCATTCATCAGGATGCAGCTTTGGCTGTCAGACGCGCACAACGTCGATCGATTGCAGGCGTTGAAGAACGAGCGACGGGAGGCGAACAAGAGACGACGCAGCAGCGGTCCCGGTCACGACAACAGTTCCGACACATCAAGCAACGACACTGCCGAGTTTTATCACGCGGCATCGCCCGGTCCGGGACCCACCACCGGAAAGAAGCAGCGCGTTCTCTTTTCGGAGGAGCAGAAAGAAGCTCTTAGACTCGCTTTCGCCCTGGATCCGTATCCCAACGTAGCCACCATCGAGTTCCTCGCTGGTGAACTCGCCCTATCCTCAAGAACGATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAGACGCCGCATGGCCAACCGGAACCGCAATCGCCGCGAGAACCCGGCCAGCCGTTTGATCCTGTCCAATTCAGATTACTATTGAACCAAAGACTGCTGGAAATCCAAAAGGAGAGACTGGGTCTAGGAAACGTACCCTTACCTTACTCTCCGTACTTTAATCCCAACTTGGCGGCCCTCGTAGGTAATGCGCTGAAAGAACAATGCTCCGGTCTCGATCTCTCGATGAACTCCCTGAAGAGAGAGCCAAATCAAGAATTCGAGGATGAGGATGTCGAGGACGCGATGAGTAATCTCGGTAGCGAGGACTCGGAGGGCTCGGCCGGTAGTATAAAGAGAGAACCGACAGAAACGCCGTCGGCACCCGCGACGGTCAGGTCTAATAGAAGAAAACCCGCGGCACCGCAATGGGTGAATCCGGAATGGCAAGAACCGGCGAGAGCGGGCGACGAGGTGATTATCAACGGCGTCTGCGTGATGCAGACGGATGATTACGGCGTGAAGAGAGAGGCCGAAGAGACTATAAGAGTCGAGCCGACTCCGGTGCAGGATCGATATGAAGAGGACGCTCAAAGTGACGTCTCATCCGTATCCGGCAATAACGGCGCCGATCGGGATAGTCCGCTACCCAGTCCAAAGTCCGGTCAGAATAGTCCAGCGACGTCGCTCAGACCGCCGTCGGCGCAACAGACGCAACAGTCTACGGAAGAAAGTCCGAAGGACGTAGTGAAGCACGAGCCGGAGGAAACGTGGGACTACTAG
Protein Sequence
MYYLLHIVSYLEDRIHKMVEVSDASEHHPLFLRWSQRIPSAGVYQIYSHWLRATSAEKEIAALKEQLAATNDSNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNSNLEQELQAKDKEINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHISRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPTAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIISQQQQQQQQQQQQQQQQPQQPPSQSSQLSQLTQQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGTDPSSTSNTPAKSNTPIGTTPLGNLEVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSNPSASINGGGLTPGVPSAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDQLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKGKEQGMPAFARGPQDGGPPEISDERLAHILSETGHMQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFPSAIFPHFFSGAQGGLQGIERTQEDIRMALDAYHRELQKLNAAPGQNSSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAAQAAAQAAAQQHQQENQMQLGPPQQSPQLPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNSLKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPSAPATVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPATSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729955;
90% Identity
iTF_00221825;
80% Identity
iTF_00898651;