Basic Information

Insect: Linepithema humile
Gene Symbol: JARID2
Assembly: GCA_000217595.1
Location: NW:22543-30370[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-22 2.1e-19 69.0 0.1 6 89 1345 1426 1341 1426 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-22	2.1e-19	69.0	0.1	6	89	1345	1426	1341	1426	0.93

Sequence Information

Coding Sequence: ATGGTTTTAAATCGGaatgataaaagaaagaagaaggaagGAGATTTGGTAGATCTGATGGAACCACTCTCGGAATCTCCAAAGAGGACCAAAGTTCACGcacaaagaaaatttgcacAAGGTGCAACTACAGTGTTCAACACATCACCTACGCCTGTcaaagacaaagaaaaaactaaGCCTGCCATGATCACGGAATTAATAACTCACAAACGTCCGAATACGGAAgactttttaacatttttatgcttCAGAGGAACTTCCATTTTGCCAccaagtttaaattttttcaatgtcggcagcaagaaagaaaaaccAGAACCCAAACTATCTCGTATTTCTACAGAGAAAATATCATCTTCTACTAGTACTTCCACAGAAACTCAGAAACAAGACACATGCCAGAAGAATGTAACAAAAGTAAAGCCTGTTGTCTCTGATAAAAAGAAGATGCCTACTACGATACACAAGAACATTACCAAACTTAAAACGGCAACGTCTACGGTTCAAGCACTTAAAAAGAAGTATCAAGAGCAACGCCTCGCTAAGCAAaggatcaaaaataaattcaaagccACTTGCGTTATGAGAACGAGATCGTGCACTGAGAGAGCTATATTGAAAGCTGGTATTCAGTTGGCGCCGAGAAAATTCTTACCCAGAATCGAAACGAAGAGACACGGCCTGAGAAGCAGTGTACTATTGGATAAAGCTAACAAGCCTTTGGCAAAGACGAGAGTCGCGCCACCCAaaccaaagaaaaaaatcaacttgAAACCGAAAGCTGTCGACACTTCGAACACGGATATGTCGTCCGGAGAAGAAAACGGCCGGAAAGAGGATGAGGAGGAAGAATTACCTGTAGAAAAGTCGACATCACAGATAAAGCGCAACCTACAAAGAGGTATTCAGAAGAAGATCTGCACCAGAAGTAAGTCTGAGATGCGGCGAGTCACCAGATCGTGCAGTAGTACAGTCTCCTCGCAGAATCCTTCCAGGAGGCCGACCAGAAAGACTAAGGAAGCGGCCGCCGTCTACATGGAACTTCTTGGAAGAAAATTAGTGAGCCCGGATTTAGAGAACGATGACAACGATTCGGTCGAAAGTTTCCCCGAGCTACCAAGTGCACGTAGAATGGCGCAAACGGAGAACGAATTCAAAGCCAAAGTGAAACAGACGTCTGCGAAGACTGTTAATAAAGCTAAGGATTCCAAAGTTAATGCCTTCCACGGGAATAAACGATTGGACAAGAGCAAAAACAACAAATTGATCTTGAAAAGCAAACGTCTGATGAGAGTGCAGAGGTACTGCGAAGAGGACAGCGAGGAGGAGTCCGAAAGCTCGGTGGAAACGAACAATACAAGGCCCATCACCAGACAGAGTGGAAAGCTCGAGAAAGTGGAAAGCTCGACAGTCAGCAGGAGTCTTAGATCCTCCTCGAAGAATACAACTGCGCAGACCGAAGTGCAGAGTAACGTAAATAACAAATCGAAGACGAAGGTTCAAAATCCCGTGAAATCtactaaagaaaaatttgtgacGAAGCGCAAACATGATCAAAATACGTCCAAGACATCGTCGGACAAAACTAGCGGATCGAAGCAAGTAGCTGTAACGAATGATCAGAAGGAGAACACTTCTTCCGAAGAGGAAACATTGGGGATGCTGCTGCGGAAAATAAAAAGGCAGAAGGAGGGCGGTAAAGAGATGGAAGAACCGCAGGTGTCTGGTAATGTGAAAAGTGACGAGGCGGTTCGCAGCGACGTACAAAAGACGAAAGCAGACGTGTCGAAAGTGTCGGACGACGAGGAATCTTTTCGTGGATTTACTAAGAAGGCGATATCGAAAGTGCTGAATTCATGTCAGACGCACGCAAACGTCAATCTGCTAGTCACAGAAGCCGACGAGAAGGTAAATTCGCTGAAAGCGAACGAAAGCACGAGTTTGCAAGAAAGCAAGGAGCAGCCGTCACCCGTCGACGCTGGTTTTCCAGTCGCAAATCTGTTGCACGACGAGTGCAGTTTGTCCATACAGGACCAGAAATCGGTGCTGGATCTGTCTATCAAGACGCACAGCTCGCTATTGCCATCCGTGGAGCAGACGGACACCAAGACGTGCAGTCACAAGACCGAGGTTTCTCCCAATCTTATACCACTGTCGACTCTGCACACGAGAAAGGAGCGAGTGAACATGTCGACCGAACAGATAGAAAAGTGGCTGAACGAGAGCTCGTTTGCCAAGGAGGAGAGCAAGTTGGAGATGGAGAACGTCTCCAGCTTCAGATACGATCCTGCGGAGAAACTGAAGGCGGACATCTCGCATTTGTCTATCTCCTCAAAAATTCAACACTTGGTACGTCCCGTCAATGTCACACTCTCAAAATTAGCGGATAAGAATTTGAGGGACCGAATGGGAATGCACAGCAGAAATGTGATGGGCGCAGCATCGAATGTTGAAACGAAGCTGCAGAGTACAATCGCTAACAAAAATAAGGTCAATGCTGAAGCGAAGGAAGTTGTTAAGAACAAAAATGAGAAGACGAGCAAGGATATTCCCATCGCTGAAGATACCAGCGATACTGTGTCGAAATCGGATCAGAATTCTCTGGACGGTTCTATAGAGAAGAAATCGCCGACGGAGAAGAAGATATTTCAACCGCGGAAGCCCTTTCTGCCTAAGGTTAAGGAACGTAAGACTGTGACTCCGAATGCGAACGCGTTCTCTCCGGAGAACGAGAGCAGCGTTTACGCGTTTGAGAGCGAAGCCGAGGCCCCCATTAACACGCCCTTCAGAAGGAAAGCGAAGGAAAACGCGAAAACGCGAACATCGAGTGCGGTGGCTTCCACTGCGGAATTCGAGACGAAAGAAAACGCCAAGGGCGATAAATCCGATTTGAAGGATAGCTCCGAAATGTCCGACAGCAAGGAAAAATCGTCGAGCGATAGTGACTCGCCCGCGAAGAGAGAGCAGGAGACGCCGGAAACGATAAACGTGGCGAATACGGCCGTGAGCATGAACAACTTCGAGCTGCCCAAGAACTTCGCGAGCTTAACCAGCGTTCAAGTACTGCCGCTCGACAAGCTCACGACGAGCTGGAGCAACGTAAATTGCAGCGCTTCCATCGCGGTGCAGGTGAATCTCGACGAGACGACGCAGGAGCAGGAGAGCAACGCGAGTCAACAGAAAAGCACCGAGATATCCACGCAGACCGAGACGAGCAACgagaacgacgacgacaacgaggGACAGTTGTTTTACATTCCGCTGCAGGCTGTCACGCGGAGCGGCCCGAACTTGGTGCAAGGTCAACAGTTGATACAGGGCGTGGCCGTGAAGCTCGGCACGGAGGGACCGACCGGTCCTAATCAGAGAGTGCTTCTCCGAGCCAAACTGGTCACCAAGCCGCCGTTGTCTGTGGCGCGCTGTCCACCGATCGGCACGGTGCAGCCGACAACGCGCACCCGACCCAATCCCACGGCGATTACAGTGGAGCAGCAAGTGCCGTCCACTTCAACAACTACGACTGTGTCGACTGCCGTTGCGAGTATGCCGAGTGCGGAGACGCAGCCGGCGTCACCGGTGAAAAACGACGTCCCGGCGCCGAGTCTGAATCGTCCGAATGTTAGCTCGAATGCGAGCAGTGCTTTGGAGAAACTCACGAAATCTCCCAAGTCGTCCAGAGAGAAGAAGGCTTCCACGGATTCGACAAAGGCCGGGAAAAGagcGCAAATGAAACACAAACAGAAAGGATCGGAGCTGTACAATAATATGACGTTCCCAAGCGCGAAGAACGCGAACGACGAAATTCGCGTAGTCGAGGCACCGACGTTCCATCCGACGGAAAAAGATTTCCAAGATCCGTTGGAATATATCGATAAGATTAAATCGATCGCTGAGAAATTTGGAATATGCAAAGTCGTGCCTCCGGCAAATTTCAAGCCTGAATGCAAAGTGTCTGATGACATGAGGTTCACCGCTTACAATCAGTATGTACATCGCATGCTCCATCGGTGGGGTCCTAATGTGAAGGAGATGATGGctatcaagaaatatttagcTACTCAAAGCATCACCTTGATTCAACCGCCCTGGATTGGAGGGATGGAGGTCGATTTACCTCATTTGTACCAAACGGTCCAAAACTTGGGTGGACTGAAAGAAGttatcgagaaaaagaaatggcAGAAGGTGGCAGACGGTATGAAGATACCAAAATCTGCGCAAGATCGTGTCACTAAACTGGatgatatttattgtaaatatttactgCCGTATGATACGTTATCCCCAGAGGAACGCAAGAAACTGTTCGACGAGGTTGAAGCTGAGTGGATGAAAAAGGAGAGCAAAGCTTTGCAAAAGCAAGAGGCACTGTCCAATGATAATgatgaggaggaggaagaagacaGTTCTGATGAAATTGAAGAATGCATCGTAAAAGGAAGAAACATGCCATTGAACGCTTTTTACCGAATCGCTCGCAATACGCAACGTATGTGGTTCGGCGAGAACCATCGGGGAAACGAAGCGGAAGGTGCTTTCGCCGAAGAGGTGGAGAGTGCGTTTTGGAAACACGTTGCCGAAAAAAAACGCCACGTTTGCGTGCATGCAGCGAGCATCGATTCGAGCGGTCGTGGATTCGGCTTTTCCGTTGCCAAGAACAGCCCGTTCGCTAGACATCCGTGGAATCTCAAAGTACTTACTAACAATGCTGGATCAGTACTCCGAGCTTTGGGACCATTAATGGGCGTGACTGTACCAACATTGCACGTAGGTATGTTATTTAGTGCTTGCTGCTGGTATCGCGATCCGCATGGTCTACCGTGGATAGAATATTTACATACAGGCGCGAAAAAGATTTGGTACGGCATACCTGACGAGTATAACAACAATTTTCGGGAAGCGCTCTCGAAAATGGTGCCgcgatattgcaaaaataagacCATATGGTTACCTTCTGACACTGCCATGGTCCCACCAGAATTGTTAGTGAACAACGGTGTTCCATTATGCCAAACCGTGCAAGAGCCAGGACAGTTCATAATCGTATTTCCAAAAGCGTTCACCTCGAGTATATGCACCGGTTATGTAGTGTCCGAGAGCGTGTACTTCGCGCAGCCATCCTGGTTAGAAACTGCTGAGCAAGTATTTAAGGATATACAAGACAGTTGTGAACCTTCCATCTTTTCATTTGAaagattgttatttaatattattaatgacacGAGATTTCATAtagatatattgaaacagatactgCCGAGTGTGATAAAGATTCGCGAAAAGGAATTAGATTATCGCAAACAACTGGAAAATGTTGGTCTTACGAATAGAGAAAGATTGCCTTTACCCGACAgtggaaaaggaaagaaaggaaaaagagtGAAAGAGGATGATGGTGATTTTGAATGCGAAACATGTAGAGCCAACTTATTCGTCTCACTGGTGAACAATTCGCAAGATGACAGCGTCTATTGTTTGCCGCACGCACTGCAGCTATTCAATCGTAAAAAACAGGTTCTGAAACATTGCACTCTAATGTACACATATGATGAAGATGAATTAGACGAATTGATTCACAAACTGGAACACAGGATCGAAGCCAAATCTAAAAAAactaatcaaataaaacaaagtaaataa
Protein Sequence: MVLNRNDKRKKKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNTSPTPVKDKEKTKPAMITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKEKPEPKLSRISTEKISSSTSTSTETQKQDTCQKNVTKVKPVVSDKKKMPTTIHKNITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKATCVMRTRSCTERAILKAGIQLAPRKFLPRIETKRHGLRSSVLLDKANKPLAKTRVAPPKPKKKINLKPKAVDTSNTDMSSGEENGRKEDEEEELPVEKSTSQIKRNLQRGIQKKICTRSKSEMRRVTRSCSSTVSSQNPSRRPTRKTKEAAAVYMELLGRKLVSPDLENDDNDSVESFPELPSARRMAQTENEFKAKVKQTSAKTVNKAKDSKVNAFHGNKRLDKSKNNKLILKSKRLMRVQRYCEEDSEEESESSVETNNTRPITRQSGKLEKVESSTVSRSLRSSSKNTTAQTEVQSNVNNKSKTKVQNPVKSTKEKFVTKRKHDQNTSKTSSDKTSGSKQVAVTNDQKENTSSEEETLGMLLRKIKRQKEGGKEMEEPQVSGNVKSDEAVRSDVQKTKADVSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTEADEKVNSLKANESTSLQESKEQPSPVDAGFPVANLLHDECSLSIQDQKSVLDLSIKTHSSLLPSVEQTDTKTCSHKTEVSPNLIPLSTLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDPAEKLKADISHLSISSKIQHLVRPVNVTLSKLADKNLRDRMGMHSRNVMGAASNVETKLQSTIANKNKVNAEAKEVVKNKNEKTSKDIPIAEDTSDTVSKSDQNSLDGSIEKKSPTEKKIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESEAEAPINTPFRRKAKENAKTRTSSAVASTAEFETKENAKGDKSDLKDSSEMSDSKEKSSSDSDSPAKREQETPETINVANTAVSMNNFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEQESNASQQKSTEISTQTETSNENDDDNEGQLFYIPLQAVTRSGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTRPNPTAITVEQQVPSTSTTTTVSTAVASMPSAETQPASPVKNDVPAPSLNRPNVSSNASSALEKLTKSPKSSREKKASTDSTKAGKRAQMKHKQKGSELYNNMTFPSAKNANDEIRVVEAPTFHPTEKDFQDPLEYIDKIKSIAEKFGICKVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLIQPPWIGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERKKLFDEVEAEWMKKESKALQKQEALSNDNDEEEEEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENHRGNEAEGAFAEEVESAFWKHVAEKKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEYNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVNNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRFHIDILKQILPSVIKIREKELDYRKQLENVGLTNRERLPLPDSGKGKKGKRVKEDDGDFECETCRANLFVSLVNNSQDDSVYCLPHALQLFNRKKQVLKHCTLMYTYDEDELDELIHKLEHRIEAKSKKTNQIKQSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423428;
90% Identity: -
80% Identity: -