Lhum010485.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- nfil3
- Assembly
- GCA_000217595.1
- Location
- NW:1023110-1038288[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-14 1.2e-11 43.7 1.1 2 60 174 232 173 236 0.93 2 2 1.6 9.9e+02 -0.8 0.1 42 52 448 458 438 462 0.69
Sequence Information
- Coding Sequence
- atggaaaaagaaCATGTACTAAGAAGACGAATTATGGTGGCAGAGTTTGTCGCCCGCCAGAGTGGATCGCCCATCAATGGTGAGACCGCGTGTCTGAACAGCAACATGCCGGCCACGCACACAATGGCGCACAACGGGCACGGTGCTCCGCACAGCGGACCCCACGACGCCCACGGACCGCTCACGGTACCCCTTACCCATCCCGGTCATCACGGTGGACCGCCGACCGCGGCGACGAtccaacagcagcagcaacagcatcAGCAGCATCAATCGCAGCAGCAACCGCCGCCGCTGCAGCAACCGCAGCACCATCACCATCATCCGGGACAGCAATCGgcgcagcagcaacagcagcagcagcagcagcagcagcagcaacagcagcagcagcatctTCATCACGACGCCGGGCAGGTGAACACCCACCCCCCGGAGAGCTACTCGCCCAACTTTGACATTCGCAAGGAGCTGTTCTCGCAACGCAAGCAGCGCGAGTTCATCCCCGACAACAAGAAGGACGACAGCTACTGGGATCGCCGTCGGCGCAACAACGAGGCCGCCAAGCGATCGCGCGAGAAGCGCCGCTTCAACGACATGGTGCTGGAACAACGCGTGATGGAACTCAGCAAGGAGAATCATATCTTAAAGGCGCAGCTCGACGCGATACGCGAGAAGTTCGGGATTTGCGGCGAAGCCGTTATCAACACGGAGCACGTGTTGGCGGCATTGCCGAACGAATCGACGATCAACGTGAAGCGCGCCAAGCTACCGGCGACGACGGCCCTTCTGTACGCGCGCACCCCGAGCCCGGTGCACACGTCGGTGATCCATCAGCCGGTGAGCGGCGCCCGTTCGCCCCGTTCGCCCGCCGCGCAGCTCTTCGTACCGGACGCGACGGCGTATCCCGAGAGCGAGAGCTTCCACCAGTATCCGTACTCGCACCCGGCGATGCACCACCACTTGGACACTTCGACGAGCGCGTTGAATCTATCGTCGCGCGGCCGCCGGGCGCAATCACCGTACGAGCTGTCGTCCGGCAGCGGCGACGAGGCCGGCGGCCCGCCGATGGTCATCGGCTCGCAGAACAACCCGGCCGCGAACAACAGCCTGCCGCACAAGCTCAGGCACAAATCGCGCATCGGCGACAAGGACGCCGCGAGCGCGCTCCTGGCATTGCAGGGCATCAAGCAGGAGCCCGGACCGCGAGCGTCGCCGCCGTGGGACAACGAGGGCTCGAGCGACGAGCGCGATTCCGGCATCTCGCTCGGCGCCGAGTGGTCCGGCTCGACCGGCGTGTCCGCGGTCTCGGAAAATGATCGGGAAGTGAAGCTGAAACTCGATCGTCTCGCGTCCGAAGTCGCGAGCCTGCAGTCAATACTACGTTTGAAGCCCTCAGGCGCCCCGGTGGCGGACAGCCTCGTGACGGGGCATGCCGCGGTCAGCGGACCGTGA
- Protein Sequence
- MEKEHVLRRRIMVAEFVARQSGSPINGETACLNSNMPATHTMAHNGHGAPHSGPHDAHGPLTVPLTHPGHHGGPPTAATIQQQQQQHQQHQSQQQPPPLQQPQHHHHHPGQQSAQQQQQQQQQQQQQQQQQHLHHDAGQVNTHPPESYSPNFDIRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLDAIREKFGICGEAVINTEHVLAALPNESTINVKRAKLPATTALLYARTPSPVHTSVIHQPVSGARSPRSPAAQLFVPDATAYPESESFHQYPYSHPAMHHHLDTSTSALNLSSRGRRAQSPYELSSGSGDEAGGPPMVIGSQNNPAANNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDNEGSSDERDSGISLGAEWSGSTGVSAVSENDREVKLKLDRLASEVASLQSILRLKPSGAPVADSLVTGHAAVSGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126457;
- 90% Identity
- -
- 80% Identity
- -