Lhum003158.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- mafa
- Assembly
- GCA_000217595.1
- Location
- NW:711461-726129[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4 4.5e+03 -3.0 0.2 43 55 140 152 140 153 0.84 2 2 1.9e-14 1.2e-11 43.8 16.1 2 63 326 387 325 389 0.96
Sequence Information
- Coding Sequence
- ATGGAAGCCGAGGACCATCTGGCAAGAGAGTACGTGCAAGAGTTTGTTCTCGATCATCTGGATCCCGCCGACGTCAAGCGAGAGGTACGAATGAGTTCGCCGACGGTAATGGTGAACGGCAGCGTGGTGCAGCTTCCGGGGCAGGTGCAGCCGCAGGGCCTGACTTTGGCGCCGCTAACGCCGCCCGCGCACGAGCTGGAGCAGCCGCATCCGCTGTACGGTCAGCCCCACATTCAGGTGCAGCACGGCGTTCTGGTGAAGGCGCCGCCGGGCGCCGCGGCGCACCTCACTACATTGTCGCATCCGGGCACGCCGCCGGACACGCCGCCCGTCTCAGcctcgccgccgccgttgcaGCTGCACCGCGGCGACCGGGATCCCCGGGACGCGCGCGATGTCCGCGGCGGCATACTCGTGCAACTGCAACAGCCGGCGGCGTTGGTGCAAGAAGAGATGCAGATCGGCACGGGCGGCATGGGCTGGCTGACGCAGTCGCTGAGACAAGAGCCGCTGGACCTGAGGCCGCATTGTCCCCAGGAGAACACCCCGGAGCCTCATCATGAGCCCTGGTCGGCCACGTCGGCGCATCATCACTTCCAAGAGCTGCAGCAGCTGCCGCGATCCACCAGGCACACAGGTGGATACTTGACAATGTCGAGTCATCTAGAGTATTACAGTCCGGGTGCAGGTGGAGGGATGCTTCCCGCGGGCGGGAATGTGATGCACGGGATGGACGACAGCATGCAGGGGATACCGATGCAACCGGGCAGACCGTTGAGCGTGTGCTCCGTGAGCTCTTGCGGCGCCGGCGGCCCGAGTCCGGCTCATCGTGTGGGCAACGGCTTGTACTCCAATTGCAATGGCTCGAATCCGCAGGAGGAGCTCATGAACGATGAGCTCCTGATGTCGCTTTCCGTGCGCGAGCTGAACAAACGCCTCCACGGTTGCCCGCGAGAAGAGGTGAGTGAGGTCGTGCGACTGAAGCAAAAGCGGCGGACCCTGAAGAATCGCGGCTATGCCCAGAATTGTCGTAGCAAGCGGCTGCAGCAACGCCACGATCTCGAGACCACTAACCGAAATCTGCAAAACGAGATTCAACGTCTGAAAGTCGAGGCAGCGCGGCTTCAGCAGGAGCGTGATCTTTATAAGCAGAGATACGAGATGCTGAGAACGCGGCAGAATCATCATCATAGTCACAATCACAGTCATCATCAACAACAGAcgccgcagcagcagcaacagcagcagcaacaacagcagcagcagcagcagcagcagcaacaacagcagcagcaacagcaacagcaccAAACCCAAAACCAACAGCCACATCCGCAACAACAACCGCAACACCAACCGGCACCCGCGAGTCCTGAAGTCTATCTGTGA
- Protein Sequence
- MEAEDHLAREYVQEFVLDHLDPADVKREVRMSSPTVMVNGSVVQLPGQVQPQGLTLAPLTPPAHELEQPHPLYGQPHIQVQHGVLVKAPPGAAAHLTTLSHPGTPPDTPPVSASPPPLQLHRGDRDPRDARDVRGGILVQLQQPAALVQEEMQIGTGGMGWLTQSLRQEPLDLRPHCPQENTPEPHHEPWSATSAHHHFQELQQLPRSTRHTGGYLTMSSHLEYYSPGAGGGMLPAGGNVMHGMDDSMQGIPMQPGRPLSVCSVSSCGAGGPSPAHRVGNGLYSNCNGSNPQEELMNDELLMSLSVRELNKRLHGCPREEVSEVVRLKQKRRTLKNRGYAQNCRSKRLQQRHDLETTNRNLQNEIQRLKVEAARLQQERDLYKQRYEMLRTRQNHHHSHNHSHHQQQTPQQQQQQQQQQQQQQQQQQQQQQQQQQHQTQNQQPHPQQQPQHQPAPASPEVYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423404;
- 90% Identity
- -
- 80% Identity
- -