Lhum000990.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- creb3l4
- Assembly
- GCA_000217595.1
- Location
- NW:2113-9651[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 9.4e-17 60.1 9.9 2 64 338 400 337 401 0.96 2 2 0.96 5.8e+02 -0.1 3.5 30 62 445 482 440 491 0.62
Sequence Information
- Coding Sequence
- ATGATGTCGGACATGAATCTGCTTGATTTACTGGATGAAACGTTTTTCAAGGAAGACATTAAGAATGAGCTGTTCGTCGATCACAATTATAACGACGACGTCATAGCGacgGAGGAATGCCCGACAAATTCCGATGACTTGTTGTCTTCAATCTTAAAGATGGAAGATTCACAACTTGATTTCAATTTGATTGGCAAGGATCTGAAAACAAGTCCGTCTTCTTCGTCGGACAGCGGGCTTTCTAGCATGCTAAGTCCTTCTTACGAACAGCAGTTGAGTCCATTCTTGTTGAGAGCGGACAACAATGAGGAAGAACAGATTGAAATCAGCAACTTCGATTTGAACAGTCCACAAAATTTCGTAGATTTTGAGCCTGCTGCTAGTCCGTCTTTGGGCAGTGTAGACAGTCCGGTTAGATCTATTATGAGCTCTAACATCGGTTCACCAGCCACTGACGTTGCCGAAGAGATGGATTACGAACAAACTTTGGTTGCCGTTGTAACGCCGAACAACACTATGCCAAATATCAACACTGTTGTCGCCGCAGAACAGCCGATTGATATTGaTCCAGCATCTAAACAGCAAGTGCATGTTATGCCACAAGAGAACATTGTGAATGTTCGCAATTTCACATGCAATGGAAAACGAAACGTTCAACAACTGATACGCGTCACTCCAGTGGGTTCTGATAATCCGCGATCAATTCTTTTGCCAGTAAACTTCAAAAACATGAAGAAAGTCCGAACTATTAAAATCATGACCGCTACACAAGCAAAAAATCtaaagaatttcaaaatcaatcaggcaaatattattaataaacctATTCAGATGACTATTAAGCAAGAAGATTCTAGTAGCGACAAAGGTTGCAACTCCAGTGACGAGGTGCCATCGGAAACGGACTCGCCTTATCCAAGACTGAAGCTAAGTGCCGAGGAAAAGCGACTGTTGCAAAAAGAGGGCATCACATTGCCCAGTCGTTATCCGCTGACGAAACACGAAGAGCGTGAATTAAAGAGAATCAGACGCAAGATCCGCAACAAGATATCCGCACAGGATTCTCgtaagagaaaaaaggaataCGTGGACGGCTTGGAAGATCGCGTGAAACAATGCACGgaagaaaatataactttgCTGAAACGAATCAAAGTCTTACAGTCGCAGAATCAAAGTCTGGCTGGTCAGTTAAAGAGATTACAAGCACTCATACAAAAGGGCAACAAGAGTGCTCAGCCAGCCACTTGCCTGATGGTCTTACTGCTTTCATTAGCTCTCGTTGCTGTGCCGAACCTGCGATCACActccaataataataacaatgatcTGATGCAACAAGAGCAGGAGCAACCGGAGAAAACATCACTGGCGGgCCGCTCGAGAACCTTACTCTATACGAAGCAACTAATGGATGAGGAGTTACAGCAGTATGGCGAAGAATTATTGCAGGAGGTTGAAGGCCTTCTGGATCATGATTACAGCCCAGTAATGCAAATGCCTCTCTACAAACGTCCCCGGATTGACAATGAAGTTACACCCAAGTACATTTCTTCTATGAATTACGTGGGAGGAACACTTGGCTTAAAACCAGACCTCGCGATGACGAATGGGAAGTACATCGAGCCACCATTGGACGACGTGTGGCCGCCGCCAAATCCAGGCGGACAGAAGACGGCCAAAGTGGTGGATAAACTCGAAGCTCTTACTAACGaattgaaaatcaatatttccgATGTTGAGGGTACCAGAACAGTTCTTGTCAAAGTACCTCAGAATAAATAA
- Protein Sequence
- MMSDMNLLDLLDETFFKEDIKNELFVDHNYNDDVIATEECPTNSDDLLSSILKMEDSQLDFNLIGKDLKTSPSSSSDSGLSSMLSPSYEQQLSPFLLRADNNEEEQIEISNFDLNSPQNFVDFEPAASPSLGSVDSPVRSIMSSNIGSPATDVAEEMDYEQTLVAVVTPNNTMPNINTVVAAEQPIDIDPASKQQVHVMPQENIVNVRNFTCNGKRNVQQLIRVTPVGSDNPRSILLPVNFKNMKKVRTIKIMTATQAKNLKNFKINQANIINKPIQMTIKQEDSSSDKGCNSSDEVPSETDSPYPRLKLSAEEKRLLQKEGITLPSRYPLTKHEERELKRIRRKIRNKISAQDSRKRKKEYVDGLEDRVKQCTEENITLLKRIKVLQSQNQSLAGQLKRLQALIQKGNKSAQPATCLMVLLLSLALVAVPNLRSHSNNNNNDLMQQEQEQPEKTSLAGRSRTLLYTKQLMDEELQQYGEELLQEVEGLLDHDYSPVMQMPLYKRPRIDNEVTPKYISSMNYVGGTLGLKPDLAMTNGKYIEPPLDDVWPPPNPGGQKTAKVVDKLEALTNELKINISDVEGTRTVLVKVPQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765281;
- 90% Identity
- -
- 80% Identity
- -