Laur012886.1
Basic Information
- Insect
- Limnephilus auricula
- Gene Symbol
- pnr
- Assembly
- GCA_951813805.1
- Location
- OX638399.1:28703745-28715082[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-17 1.2e-13 51.0 2.8 1 35 424 457 424 458 0.98
Sequence Information
- Coding Sequence
- atgacaaccctggaTGTACTGCAGCAATCCACAACTACCCTGGAAGAACTGATCCCATCAATATCAGACAGTTCCAGAAGCATTATAAAGTATGAGGCCATGACAGACTGCGACCTGCCCGACTCCACAGAGGAAATGAAGAACATGGAAAGTCGGCAGGCCGCGGCCACGCTGCTGCAGATCAAGAATCACGATCCCAGCAAATTCACTGTGATAAAATCCGAACATGAACCCCAAATCATATTCAACAGCATCAGTGGCGTATTAATGGAAAGAGCCACTGAAAACCTTCACCGCAATCCAATGTTGgacatattatttgataaagcCGTCTCCCAACGTCTCAGCGAAGAATCTCACATTAAATCATCGCCCAAATCGCAAAACGACGATTACTATTACAACACAAATCAGTATAACGTAAGACCTGACGTACAGTTGGATCTTTCCGTGAGACACGATCCCAATCATTCCAACAAGCCGCCTAATACTTATTTGTTAAGTAGACACAGCGAGGACGAGCGAAACAGCGAAAAAGAAATGGATCTGTCCACGAGTAAAAAGATTAAACTGGACATGGCGTTTGAGTCGAATTCTGCAGAAGAGGCTGACGAATCGGAGGGCGAACGATACAACGGGAACAGCCGGCAGATTGACCTGTCCGTGCGGTCTAGCGAGAGGGAAGACGGTCAGAAGATGGAGTGCGGAGATTTGTCAATACCTTACGATGAAGTCAGCCAAAGCAGCAGTGGTTCCGATCCAGAAAGACTTCAGATGGATATTGCCCAgTTGGAGGATGACAATGATGAGAACACCATGTCAGCCCCGGCGTCTCCTCAGGAAGAAGATGCCGAACGGGACTCCATCTGGCAAGCGCTCCATCAACAAAATGGCATGGCAGGCGAGGCGACCCAACTACTCCGACGGCTCATCAATTGCAAGAGGCTCGGCATGACAGTGTCCCCCGTGGCGCAGGGAGCTCTACACAACCGGACCAATGTCAATGGGTGCTCTTCACCTGTGGGCTCTGTGGAAAGCGTGGGGCGCTCGGGAGGCAAGGCTGGTCGCAGGAAGCAGAGCTTCCCCTCTCGCGCTGCCGGGCCCCACTCGGCCCCATCAGAGCGGGAGCTGCAGTCCTGGAGACAGCGCTATCCTGCCACTGATCAGCAGTGCATAGAGTCTGTGATGGGCCCCGGTCCTCCCTCCCCTCCGGGCGCCCTGCCCCCCGCAGCGCTGCCACCCGGCCACAAGCTGCGCGTGGACCTGGCCTGCAACAACTGCGGCACGCGCACCACCACCATCTGGCGGAGAGATGCTAACGGCGACATGGTGTGCAACGCGTGCGGTCTGTACTTCAAGCTGCACGGAGTTGCGCGCCCCACGGCCATGCGGAGGGACACAATCCACACGCGCAGGCGGAGGCCCCGAGACTCCCTTAAACCTGGCCGAAAATCCAAGGGTGGGCGCTGTCGAGAGGAGGGTGGAGGAGGAGGGGGGGCACCGGGGGGAGGGGTGGGAGCCACCACAGACATGTTAGCCGCCCTCCGTCGCACCATACAACCACACCTCTTCATGGCGCTGCAGGCGCACCAGAGGTCCAACGCTCTCACTATGTCCCCGGTCCTGCAGATGGAGGGGGTGGACTGTGAGGACGGGCCGCTGAACCTGGTGGCGTCGCACCTGACGGCCGCCGAGGAGACTCGCTGA
- Protein Sequence
- MTTLDVLQQSTTTLEELIPSISDSSRSIIKYEAMTDCDLPDSTEEMKNMESRQAAATLLQIKNHDPSKFTVIKSEHEPQIIFNSISGVLMERATENLHRNPMLDILFDKAVSQRLSEESHIKSSPKSQNDDYYYNTNQYNVRPDVQLDLSVRHDPNHSNKPPNTYLLSRHSEDERNSEKEMDLSTSKKIKLDMAFESNSAEEADESEGERYNGNSRQIDLSVRSSEREDGQKMECGDLSIPYDEVSQSSSGSDPERLQMDIAQLEDDNDENTMSAPASPQEEDAERDSIWQALHQQNGMAGEATQLLRRLINCKRLGMTVSPVAQGALHNRTNVNGCSSPVGSVESVGRSGGKAGRRKQSFPSRAAGPHSAPSERELQSWRQRYPATDQQCIESVMGPGPPSPPGALPPAALPPGHKLRVDLACNNCGTRTTTIWRRDANGDMVCNACGLYFKLHGVARPTAMRRDTIHTRRRRPRDSLKPGRKSKGGRCREEGGGGGGAPGGGVGATTDMLAALRRTIQPHLFMALQAHQRSNALTMSPVLQMEGVDCEDGPLNLVASHLTAAEETR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -