Laur021539.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Limnephilus auricula
Gene Symbol
gata5-b
Assembly
GCA_951813805.1
Location
OX638410.1:15285166-15300305[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.5e-16 1.4e-12 47.6 3.2 1 34 624 656 624 658 0.97
2 2 2.9e-17 9.2e-14 51.4 4.8 1 34 683 715 683 717 0.97

Sequence Information

Coding Sequence
ATGGGAGCAGTCCGAAATCCTCCCCCTGCCCAGCCCTCCCGACCTGCCACCCCCAAGGCGCAGGCAGACTCGCGCCCCCCGAGCAGACCGGAGCCCGAGCCCCTCAGCGAAGACACTAAACCTCCAGTTCCTATACCAGAGCAGCCTAAACAGCAGCCTGAAAACTTCAGTACAAATAACACTACCAAAGCACACACCCACACCCAACCGTCAAGTCCGCGACGCGAAACAGAAGAACGAAATGGACAAATCAGTCAGAGGCAAACTCCAGTTGAAGACAGGGAAAGAGGGGACTCCCCTGCCCCTTCAGTCATTACCTCGAGAAGACAAGTTCGAACCATCACGACAGCTGGTCACATCACCACTGACGACGTAGCAGAAGACGAAGAGTCTTCAAACCAAAGCAAAGCTCAAAATTTAGAAATGCACCAAGAGAAGCAACCAGAAGAAGAGAGGACAGCCAGAGATGAACAAACTGCACAACCTCCAGCTTCTGCTCCCCCTCAAGAACAACCAAGGCAATATTATAAAGTGGAGAGCCATCCTGGAACTGTTTATTTAGCGGAAAATGATGGTCAAGGTGGACCAATGGAGTATGTGAGAGGAAGACTCATAGATGATGTGGCATTAGAAGAGAAACCTAGGCATTACACCGAACCCGGAAGGTATTACACCAGAGAAATCAAAGGATCGATTTATCCAGGTCGGTTCACTACTCCAGCCCCTGACCGATCTCCGGGGCATTACGATAAGCGTTACCAACCATACCCAAAGCCTGGATTATATGCCAGCAAAATGGTTACTGTGGCACGATACCCACAACAGATAATCCTCACGCAAGACCCTGGACCAGGAGGAATCAATGGAGAAATCCAAACAATCGCGTATCCAGGAGACCAGAGAGACCTGTTGAGGGACATCGGAGCAGAAACTACAATAATAGCACCAGACCAAAGAGTGATCATCACAGAAAGCCCATCGCGCTATCAAGACGGTTCTCCGATGCATCAGACTATCCAATACACGACTGGCTCACCAATGTTAGCTGGACATATATCATCCACGTCTCCCCACATATACCAGCACAGTGATAACATCGGTTCTCCCTCGACTATGGAATTAGTTCACACGACTGCTGTAGGGCAGCAAGCCATCGGAATCACGATAGAGAATGGTCAACAGTTTAAATACGAGCACCACGATCCCAACGTGCCAATATCGGAGCATAAATCCACGACTTATACCAACCTCATGCCGGTTACGTCGCTTTCGAGTCATCCGAGTGTTTATACGTCCGGGGGGTACATCACTTCTCCGGGGACACAATACCAAAGCCTGCCACCGACGTACAACTACGTTACGAAGGAGCTGATGCAGATGTACCCCATAGCTCGCGGCAATGAGAGCCCCCCCAACAGTGTGTTGTATCGGGATGACCCCATCCTTGCGTCCTCCTCGCTGCAGCACTCGGAGAAGGCGGGGACGCAGATTGTGTACAGCCACACTCTGCCCGGGCACGGACACAGCATCTACGACGGTCAGTCTCCATCGAGCCCCACTTCCCAGCAGGTGACTCTGTATGGTGGGAACGGTAACAGCTCTGTGCAGTACGTTAGCAATAAATTGCACGGCTCGGACCAGTTCCTAggcgggggcgggggcggcAACGGTGGCGCGGGGCCCGGGTCTCCCGGCCTGGACTACGGGGCGCAGTACGCCATGGGGCCGGGCCCCTCGGGCGGGGTCTCCGTGGCTCTGCTGGGGCCCGATGGGGGCTACCCCGGACAGTTCGTCAGCGTGGGGCCGCCGGCTAACGGCATTGATGATGGCTATGAAGGAAGTATCCAGGGCAACGGCGACCTCAAGGAGTGCGTGAACTGCGCGGCGGCCTATACTCCGCTGTGGAGGAGGGACGGCACAGGACACTACCTGTGCAACGCTTGCGGCCTCTACAACAGGATGAACGGCATCAATAGGCCTCCGCCAGTCAAGGGGGGCAAGGCCAAACCGCAGCCAAACAGCGGCAACAGGAGAGCGGGGGTCATCTGCGCCAACTGCAGAACATCTAACACCACCCTGTGGAGAAGGAACAATAGTGGAGACCCGGTGTGCAACGCCTGCGGACTGTACTTCAAGCTGCATAGCATTAATCGTCCTCTAAGCATGAAGAAGGACGGCATCcagacgagaaagaggaagcCCAAGAGTATGGGCGGAGGCGGGAGTGGGGGCGGTGGCGGCCAGGGCGGAGTGTCTTCCAGTCGGGGGCAACCATTGGAGCCGAAGCTCCCCCCTTTGTACGGTGCCCCTCCAGGAGAGGTGAGCCAGCCCTCCCGCAGCCCGCTCCTCCTGCCGACCTCCGCCCACCTCAGCCGCCATATCTCTAGCTTATTACCGTCAATAGAACCATTGACGAATAGAAGAATCCTGGATTCAATTCCCTCCGTCATCACTTCCACAGGAGTGACTCCTTTGGACAGGGACTTCAGGAACCATTAG
Protein Sequence
MGAVRNPPPAQPSRPATPKAQADSRPPSRPEPEPLSEDTKPPVPIPEQPKQQPENFSTNNTTKAHTHTQPSSPRRETEERNGQISQRQTPVEDRERGDSPAPSVITSRRQVRTITTAGHITTDDVAEDEESSNQSKAQNLEMHQEKQPEEERTARDEQTAQPPASAPPQEQPRQYYKVESHPGTVYLAENDGQGGPMEYVRGRLIDDVALEEKPRHYTEPGRYYTREIKGSIYPGRFTTPAPDRSPGHYDKRYQPYPKPGLYASKMVTVARYPQQIILTQDPGPGGINGEIQTIAYPGDQRDLLRDIGAETTIIAPDQRVIITESPSRYQDGSPMHQTIQYTTGSPMLAGHISSTSPHIYQHSDNIGSPSTMELVHTTAVGQQAIGITIENGQQFKYEHHDPNVPISEHKSTTYTNLMPVTSLSSHPSVYTSGGYITSPGTQYQSLPPTYNYVTKELMQMYPIARGNESPPNSVLYRDDPILASSSLQHSEKAGTQIVYSHTLPGHGHSIYDGQSPSSPTSQQVTLYGGNGNSSVQYVSNKLHGSDQFLGGGGGGNGGAGPGSPGLDYGAQYAMGPGPSGGVSVALLGPDGGYPGQFVSVGPPANGIDDGYEGSIQGNGDLKECVNCAAAYTPLWRRDGTGHYLCNACGLYNRMNGINRPPPVKGGKAKPQPNSGNRRAGVICANCRTSNTTLWRRNNSGDPVCNACGLYFKLHSINRPLSMKKDGIQTRKRKPKSMGGGGSGGGGGQGGVSSSRGQPLEPKLPPLYGAPPGEVSQPSRSPLLLPTSAHLSRHISSLLPSIEPLTNRRILDSIPSVITSTGVTPLDRDFRNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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