Laur017532.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Limnephilus auricula
Gene Symbol
zfy1
Assembly
GCA_951813805.1
Location
OX638404.1:32745987-32750991[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 1.3e-05 0.00077 20.4 1.5 1 23 184 206 184 206 0.98
2 25 1.6e-05 0.00096 20.1 0.5 1 23 211 234 211 234 0.97
3 25 0.0013 0.079 14.1 0.7 1 23 289 311 289 311 0.98
4 25 4.9e-05 0.0029 18.6 3.3 1 23 317 340 317 340 0.97
5 25 0.00019 0.011 16.7 1.3 1 23 346 368 346 368 0.97
6 25 3.3e-06 0.00019 22.3 1.9 1 23 374 396 374 396 0.98
7 25 9.7e-05 0.0057 17.7 0.9 1 23 402 424 402 424 0.98
8 25 0.19 12 7.3 7.1 1 21 430 450 430 452 0.94
9 25 5.4e-05 0.0032 18.5 2.5 1 23 458 481 458 481 0.96
10 25 0.41 24 6.3 0.1 1 23 603 626 603 626 0.96
11 25 0.07 4.1 8.7 3.1 1 23 662 684 662 684 0.97
12 25 0.00047 0.028 15.5 3.4 1 23 690 713 690 713 0.96
13 25 0.0043 0.25 12.5 0.5 1 23 763 785 763 785 0.98
14 25 0.00019 0.011 16.7 0.7 1 23 791 814 791 814 0.95
15 25 5.5e-05 0.0033 18.4 0.3 3 23 822 842 820 842 0.98
16 25 1.3e-06 7.5e-05 23.6 1.9 1 23 848 870 848 870 0.97
17 25 0.00069 0.041 15.0 3.8 1 23 876 898 876 898 0.98
18 25 3.9e-06 0.00023 22.1 0.8 1 23 904 926 904 926 0.97
19 25 0.00019 0.011 16.7 1.5 1 23 977 1000 977 1000 0.94
20 25 0.019 1.1 10.5 1.5 2 23 1132 1154 1131 1154 0.94
21 25 0.00015 0.0087 17.1 0.9 1 23 1160 1182 1160 1182 0.96
22 25 0.0014 0.082 14.0 1.1 1 23 1188 1211 1188 1211 0.96
23 25 0.0057 0.33 12.1 1.9 1 23 1217 1239 1217 1239 0.98
24 25 2.6e-05 0.0015 19.5 0.6 1 23 1245 1267 1245 1267 0.97
25 25 0.00027 0.016 16.3 2.8 1 23 1273 1296 1273 1296 0.96

Sequence Information

Coding Sequence
ATGCGGTGTAATAGAGCAATTTGTTGCAGGTACAGCCTGTCATTTCGCTCATTCCACCGAGCCCAGGGCGGTGCTGCTCCCCTCGCCCCTGATGTTAAACTTGAACCCGATTCTAATGTCCAAAGGCACAATTCACAAGGCACTTTCCAAAATGACCATTTCTTTATGGACGAAACCTTGTTTCCTGCTCAGGCTTATGATTACTGTCACAATGAGAAAGACCAAGAGGAGGAGGACTTTGATAATGATGATGATAACACTGATGATGATGTTGgtaatgatgatgatgatgatgtcgctaatgatgatgatgatgaacaGTCTAACCCCAAACCTGTCGAGGAAGAAGTCAAATCAGAAAATGAAGACTTTGGTAAGCAATATGTCTTGCTGCAAGATATTGTCGCTAAACTAAAAGAACACGTTTCCAGGTGTCATAAAAGCTCTAAAAAGTATAAACTTGCAAAACGAAGACCGCCTCGTATACACGACAAGGAGACCAAAGCCGAACTGGAACTGGTGAAGGTAAAGGTGGGAGGAAAGATCCAGTACCAGTGCCATGTCTGTAACAAAGCCTTCCCCAGAGCAAACAACTTCCTGAGGCATAAGATCATACACTCCGAGAAACTGTTCCCTTGCGAGATTTGTGGTCGCAAATTCAGGATCCTGGGATATCTTAAGAACCACATGAAGAAAATTCATTCCATTGAAAGTAAACAAGAACTGTTAAATTATCAGAAAGCCCACCCTAAGTCCGAGTCAGCGGAAGATAAACAATTGGAAGATGCTAAAACGGGAGGACGCAAGTTCTTCGATTACAACGCCATCGAAAAGGTAAAAGTTCTAATTAACGGAGAAGTGTTTTACCAGTGCGAGATCTGCGACAAGAAACTATCCCGAGTGAGATATTATCTCAATCACATCACCGTCCACACGGGGGAGAAGAAGTTCATCTGCCACCACTGCGGCCGCAGCTTCCGGCTGGTGACCATGCTACGCGTACACATGCGCGTCACGCATGAGAACATCAAGGACTTCAGCTGTGACGTGTGTCCACGCAAGTTCGGCACCAAGAACAACCTGCTGGAGCACCAGCACATCCACACTGGCGAGCGGCCCTACGTGTGCTCCAAGTGTGGCAAGCGCTTCAAACAGAAGTCGGCCCTGTACATCCACAATCGCAGCCACACAGACTACTTCCCTTTCAAGTGTCCACAGTGCGAGGCCAAGTTCCGCATCCAGTCGCAGCTCAACTACCACATGATCAAGCATACAGGCGAGACCCCCTTTTCCTGCGACTTCTGTGGGAAGGCATTCCCCGCACGTTGCCACTTGAACCAGCACAGGAAGTGCCACCTGGAGATCAGGCCCTACCCGTGTAGAGTGTGTGACAAGGCCTTTCGTTATCGCAACAATCTCAATGTTCACTTAAAGAACTGCCACAAAATGTACCGCCTGTCATTTCGCTCATTCAACCGAGTCCACGGCGCCCCCGCCGCCCCCCCTCCCCTCGGCGCCGATGTTAAACTTGAACCCGGCTCTATTGTCCATAGGCCCCACGCTTCCTCTTTCCAAAACTGCGATAACTTGTTAACGGACCGAGGTTCGTTTCCCTCCAATGGCAACACCCTCTCCCTAGATTCGGACTGGGAAGAAAAGCCCACGGCCGTTTTGTTGAGAAACATGGTAATTAAACAAGATGAAGATTGTGATGGAGCAGATCATTTTAGTAATGATGATCACGAAGATAACGAACCACTCTCCAAGTTTATAACAGGCTCTGGCATTGACGCAGGGGACCTCCAATATCCGTGCACTCGCTGCACTTTTGTGGCTGGAGACAAGGAAGGCCTAGAGAGCCACACCCGGGAACAACACGATGACTTAAATAATCTATTCAAACGAAGCAGTCGCCGCACTTACGACAAACAAACCAGACTAGAACTGAATACCGCTAAAGTAAAAGTCAAAGGAAAGATTCGATATCAGTGCAAAATTTGCCATCAGTATTTGACCAGCGCATATAGCTTTGTGACTCACAAGACCATACATTCCGGCCAGAAGCTGTTCCCGTGTCACATTTGTGGCCGCAAATTTAGGCTTCTAGGGTTTTTGAAAAACCACCTGCGACACATTCATTCTATGAATAACAAACACGACCTAAAAGATTATGAAGATTCCAAACCCGCACCAGATCCCCAAGACGGCGTGAGAAAAGGTGAACGTAGATATTTAGACTATAAAGCcatagaaaaagtcaaagtcATTCACAACGGGGCTGTGTTTTACAGATGCGAAATATGCAGCAAAGAATTGACCCGAGTCAATTATTACATCAGCCACATGAGCATCCACACGGGGGAGAAGAAGTTCATCTGCCACCTCTGCGGGAAGAGCTTCCGCCTGGCGCCCATGCTCAAAGTGCACGTGAAGCTGACCCATGAGCGCATTAAGAACTACGGCTGCGAGGTGTGCGGACAGAAGTTTGGCACCAGCACCAACCTGGCCGAGCACCGCCGCACGCACACGGGCGAGCGCCCACACACGTGTCCCCAGTGCGGCAAGAGCTTTAAGCAGAGATCCGCGCTCTTCGTGCACAGTCGCATCCACTCGGACCACTTCCCTTTCAAGTGCGCGCACTGCACTCGCAAGTTTAAGATCCAGTCCCTCCTCAATTACCACATGGTGACGCACACCGGGGAGCGGCCCTTTGCTTGTCAGCTGTGCGGCAAGGCCTTCCCCATCAAGTCGCACTTGAACCAGCATATGAAGATCCACATAGAAGATCGACCATTACTGCTCGGAAGACCCGCGCGTCCAGACTCCACTGAACAGTCGACAAAACGCAAGAAACTTTCCTTTACTTCGCGCACGCCCAAACCCCCCAGACTCTCGAAACATTCCGAGGAAGTGGTCGCGCCCAACCCGTTCAAATGCTCTTACTGCTATCGCTCATACCGAGACTCGGACTTGCTCACTTCGCACTTGTTAGATTCCCACTCGGAGTTGCTCTTCCACTGCGACGTGTGCGGTTCCTACTTGGACAGGAAGGAGCTCATCCCTCACATGTCCAAGCACGCCGAGCAGTACGCGGAGGCGGAGGCCAGTCGCAAGGCCGGACTGGCTTCGACTGAACTCCCCTCCCAGCCTGTTAGCTCCTCCTTAGCTCCTCCACCCAACGACGACGCCTTCTCCATATCCAGCCATTCTAAAGACCGCTTCGACCCCATTCCCGACTCGGTGTTCGAAGCTATTAAAGACACGGAGGAGATGAGTGATTCAGTAGGAAATGTTTTACCAAAGGTGTTGGAGTTCTCCAATCCCATCGCCGGCACCGCCCCGCGAGACCCGCCCACGCCCGTCACGGTCGCGGTTAGCAAGCCCAGCGCCATCGTGTGCCCCATCTGCTCTAAAGAGTTCCGCCTGCCCTCCAGCTACTACTACCACAAGAAGCACTTCCACGAGGGCGTGAAGGAGCACACGTGCGGCGTGTGCGGGCGCCACTTCGCCGTGAAGAGTGCGCTCACAGCGCACCTCACGCTCCACACGGGCGACAAGCCCTACTCCTGTCCACAGTGCTCCAAACAGTTCCGTTCCAAAGCCAGTGTCTACATACACTACAAAAACATTCACTGTGAAAGTAAAAAGTTCACGTGCACCACCTGCAGCCGCTCTTTCCGCTGGAAGCAGAAATTGTTGCGCCATATCGCTAGTCACACTAAAGATAAGAAATACTTCTGTCCCACGTGCAACAAGGGCTTTGCCGTCAAGTACGATCTCACGCGCCATGTCAAGTTGCACGTGGATGCCAAGTTGCACGTGTGTGATAAGTGCGGAACTAACTTTTCGCAAGCAAGATATCTGAAGATCCATACCCAAAAGAAGCATTTGGTCACGTAG
Protein Sequence
MRCNRAICCRYSLSFRSFHRAQGGAAPLAPDVKLEPDSNVQRHNSQGTFQNDHFFMDETLFPAQAYDYCHNEKDQEEEDFDNDDDNTDDDVGNDDDDDVANDDDDEQSNPKPVEEEVKSENEDFGKQYVLLQDIVAKLKEHVSRCHKSSKKYKLAKRRPPRIHDKETKAELELVKVKVGGKIQYQCHVCNKAFPRANNFLRHKIIHSEKLFPCEICGRKFRILGYLKNHMKKIHSIESKQELLNYQKAHPKSESAEDKQLEDAKTGGRKFFDYNAIEKVKVLINGEVFYQCEICDKKLSRVRYYLNHITVHTGEKKFICHHCGRSFRLVTMLRVHMRVTHENIKDFSCDVCPRKFGTKNNLLEHQHIHTGERPYVCSKCGKRFKQKSALYIHNRSHTDYFPFKCPQCEAKFRIQSQLNYHMIKHTGETPFSCDFCGKAFPARCHLNQHRKCHLEIRPYPCRVCDKAFRYRNNLNVHLKNCHKMYRLSFRSFNRVHGAPAAPPPLGADVKLEPGSIVHRPHASSFQNCDNLLTDRGSFPSNGNTLSLDSDWEEKPTAVLLRNMVIKQDEDCDGADHFSNDDHEDNEPLSKFITGSGIDAGDLQYPCTRCTFVAGDKEGLESHTREQHDDLNNLFKRSSRRTYDKQTRLELNTAKVKVKGKIRYQCKICHQYLTSAYSFVTHKTIHSGQKLFPCHICGRKFRLLGFLKNHLRHIHSMNNKHDLKDYEDSKPAPDPQDGVRKGERRYLDYKAIEKVKVIHNGAVFYRCEICSKELTRVNYYISHMSIHTGEKKFICHLCGKSFRLAPMLKVHVKLTHERIKNYGCEVCGQKFGTSTNLAEHRRTHTGERPHTCPQCGKSFKQRSALFVHSRIHSDHFPFKCAHCTRKFKIQSLLNYHMVTHTGERPFACQLCGKAFPIKSHLNQHMKIHIEDRPLLLGRPARPDSTEQSTKRKKLSFTSRTPKPPRLSKHSEEVVAPNPFKCSYCYRSYRDSDLLTSHLLDSHSELLFHCDVCGSYLDRKELIPHMSKHAEQYAEAEASRKAGLASTELPSQPVSSSLAPPPNDDAFSISSHSKDRFDPIPDSVFEAIKDTEEMSDSVGNVLPKVLEFSNPIAGTAPRDPPTPVTVAVSKPSAIVCPICSKEFRLPSSYYYHKKHFHEGVKEHTCGVCGRHFAVKSALTAHLTLHTGDKPYSCPQCSKQFRSKASVYIHYKNIHCESKKFTCTTCSRSFRWKQKLLRHIASHTKDKKYFCPTCNKGFAVKYDLTRHVKLHVDAKLHVCDKCGTNFSQARYLKIHTQKKHLVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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