Laur020936.1
Basic Information
- Insect
- Limnephilus auricula
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951813805.1
- Location
- OX638409.1:19733706-19769698[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-14 3.9e-11 43.1 0.1 2 45 399 443 398 443 0.93 2 2 4.9e-18 2.5e-15 56.6 0.0 1 43 835 878 835 880 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACTCTACCAGGACGTATTACTAGCCAGAAACCTACCCCTGCAGCAACCAGACCAGAGCGACTCGCCCGTGGAGCCTTCAGCAGACAGCCACAGCCTTCCAGAGGCGCTGGACCTCAACCCCCAAGCAAACCAGACCTCCGAGGGAGAAGACCGACCCATGATAGCCACCACGGAAGCGCTTCAGCGCAACAACAGCGCTACAGACCTCACGCAGGACCCGCAAGACCTAATTCCAAAAAAAGAACAAGAGAAACAACCCGATCTTTCAATCCCGCTGGACGAAGACTTGAAAGAAGTCCAAGATCTAAAAACAGAAGACGGACCTTCTTCAATACTGAGAGAAGAAAACTGCAACACTCCCCAGACCACAACATTGAAAATCAAGACTATAGAAGAGATCAATACTGTGGGTGGTAACAGTAATAATGGTAATAATGGTGGGGGAGGACCAACAGAGACGATTTTGGAGAGTTTGATCAAAAGGAGCAGCACTGGACCTCCTAGGAAGCCGCAACCGGTGGACTGGCGACCGCAGGACAAGTGCTACTTCTGCGTAGATGGTGAACTGGTGAAGCCAGGTGTGGAACAGACCCCTGCAGCGCCAGAACCTCCTCCGAGCCCCCCAGCGGCGATCGAATCGGACTCCGAGTCGGGCTCGAGCCGCTCGGGCCCCAGTCCCGCAGGCGCGGTTGGGGGCCCTGGCACCGCTCGGGCTCCCCCCGGATACCTGCTGGGGCACCAGGCGCAGGCCCTGGCGCATCTTCTGCAGCTACAGCAGGCCAGACAACCCACCATTAATCAGGTCCAGTCGATGGCGGCCTCACTGGCGGCCGTGGCGGCCTTGGGTTCTCCGGGTCTCAGGGGCATGCCCTCCATCCCGCAGTCCCTGGTACCTCCGGGTCTCCTGGCGCCCCACTGGTATCTGCAGCAGAGGCAGGAAAgACCACCCCAGCAAGAACGGCCCACCACGCCACCCCGCTCACCCCCCGCCACCTCGGAGCAGCCCCTCGACCTGAGCGCTCGCCCCGGGGGCGCGGGCCCTTCGGTGGGGCCCCCGTCCCCCTCTGCGCTAGAGGCTCGACTGGCCGGCGTTAGGGGAGCTCCGATAGATCCCAAAATGTACAATCGAGCAAAACCGCGTCTGGCGCCCACTGGTGGCCGACGTGCTTACTCCGAAGCCGAGCTGCAGATGGCGCTGCGGGACATCCAGTCCGGGAGACTCGGCACCAGGCGCGCTGCGGTGATCTACAACATCCCTCGCTCCACGCTGCGCAACAAGGTGTACAAGCTGGCCGTGGAGAGGGAGCGGGAAGCGCGTCTCCCGGGACAGCTCTCAGGTGCTGCTGACAGAGaAGAGGACTCCAATGACATTACTGATGACGTGGACGATGATAAGGATTCAGTCATGGACGAAGATAAAGAAGAAGACAGAGAACTTCCAAGACCACTTCTCTCCATGGAAGACATTCTGCGTTACTCTCAAATGGAGAACCCCAACTATGGTCAGTCAGAAAACCTTCGTTCCCTGCTGCAGAAGGGAGGACAAAAGTTCTTTGACATGGAAAGTCCAAAGAGAGAACTGGCTCCAGAATCTTGGCAAACACCAGAACAAAACGTCAACACCTACATACAATCACTCCTTATGGCCAGTGGACTGGGAGCACAAATGCCTAAACCTGAAGAAAACGCCGGTGTTCCAATGATGCCAGAAATAGTAAGACTCTTAGCGGAAGAACgacataacattttaaaagaacaaCTCATGAAACGAGAACATCTCAACAATGGGAAACAAAACGAATTATCCGAGGATGATATAGCAATGAACAAAAGAATATTCTCAAGGCAGAGTTCGTCAGCAAGTTCCGTCATCACAAGAAATGATAGGGCAACACCCGGTAAGAAATCTGACTCACCAGAAGATGAAGCAATGGAGGTAGACCAAACCGGAGGAGAGTCAAGAGATTCACCTTCTAATGTTATACTTAAGATTCCGTCCTTCAAACCTTTGGTGCAAGGACAGAACTCTGGGAAGAATGGTGGTGAAGTTTTCTCCGGTCCCGCCACTTCGCCTCTCCCGTATTTCAGTCGCAGTCCTCATCAAGAAATGTCTTCCGCGTCTCGCCCCTCTGACCGCCTTTCTCCATCTATGGGACACGTTAAAggaatgttttctttaaaagaCGTCATCGCTAAAAGCATTAGTCAGAAATTCCAACAACACGGTCCACCATCAAATCATAACAATGACATGAGTCATATGAAAGTTAACTCCGCAATGGATGCTATGGAAGGCCTAGCTTTCAAGCGTGGCAGCATGACACCTCCAGTGGGGGGACAAGGTATTTCAGTTATCAAAAACCTTACCAGTCATGACCTCACAAGAAGTTTTGGTTCCAATAACTCTGGATCACAAAATCAGCAAAACAATGCTGTTGGTGGAAAAGGTACTCGACCAAAGAGAGGAAAATATCGCAATTATGATAGAGATAGTCTTGTGGAAGCCGTTAAGGCTGTTCAGAGAGGAGAAATGTCTGTTCACCGAGCAGGAAGCTATTATGGAGTTCCGCACTCCACACTCGAGTACAAAGTAAAGGAGAGGCACCTGATGAGGCCAAGAAAACGAGAACCTAAAAATCCCAACCAAgacgataataaattacaatctcCTAGCGCCAGCAAGCCTACCGATATACCAGGTGCCAGCGTATTGAGAGCGGAAAAACCTAAAGTGATGCAGAAACTTCCATCAAAACCAAATTTCCCTGCGAGTTCTCCCAACGGTCTTAAGATGCCACCAATCTTTGACGGAAGCTTAGGTTTGGGATATAATCCCTCACCGTTTCCGTTCTGGCCCCACGCACCTCCAGGATTCCCAGGACTACCTGTGGAGTTTTCGCAAAGAAATCCTGGCACATCTGGAAGCTTCCCTCCAAACAACGAATCGTTTTTTGCTTCTCAAATGATGCAGAGATTACAGGAGGAATCAGCTAGGCTCCCCGGTCCAGCGAGGAAAGATCCGTTACTGGACCCTGCAAGAGAGATGGCAGATATTTACGACGGCGCTGTAGGAGCAAACGGTTCGTTCCTCGAAGGGATCATCAGATCTAGTTTAGAGAGACCAGGACACAGAAGTGGGAGTGGCGAGGCGGAGAGTGACGGAGAAGCAGTTAGAAGACGACTAAGGCCAGATGATTTACTTCTGGCGGAGGAGATGAGAGAAGCGGCTCGGAGACTGCGTGCGAGGGAGACCGGTGCTCCTCCCCCTCCCACCCAGCCCCACCCCTCGTAG
- Protein Sequence
- MGRRKWKLYQDVLLARNLPLQQPDQSDSPVEPSADSHSLPEALDLNPQANQTSEGEDRPMIATTEALQRNNSATDLTQDPQDLIPKKEQEKQPDLSIPLDEDLKEVQDLKTEDGPSSILREENCNTPQTTTLKIKTIEEINTVGGNSNNGNNGGGGPTETILESLIKRSSTGPPRKPQPVDWRPQDKCYFCVDGELVKPGVEQTPAAPEPPPSPPAAIESDSESGSSRSGPSPAGAVGGPGTARAPPGYLLGHQAQALAHLLQLQQARQPTINQVQSMAASLAAVAALGSPGLRGMPSIPQSLVPPGLLAPHWYLQQRQERPPQQERPTTPPRSPPATSEQPLDLSARPGGAGPSVGPPSPSALEARLAGVRGAPIDPKMYNRAKPRLAPTGGRRAYSEAELQMALRDIQSGRLGTRRAAVIYNIPRSTLRNKVYKLAVEREREARLPGQLSGAADREEDSNDITDDVDDDKDSVMDEDKEEDRELPRPLLSMEDILRYSQMENPNYGQSENLRSLLQKGGQKFFDMESPKRELAPESWQTPEQNVNTYIQSLLMASGLGAQMPKPEENAGVPMMPEIVRLLAEERHNILKEQLMKREHLNNGKQNELSEDDIAMNKRIFSRQSSSASSVITRNDRATPGKKSDSPEDEAMEVDQTGGESRDSPSNVILKIPSFKPLVQGQNSGKNGGEVFSGPATSPLPYFSRSPHQEMSSASRPSDRLSPSMGHVKGMFSLKDVIAKSISQKFQQHGPPSNHNNDMSHMKVNSAMDAMEGLAFKRGSMTPPVGGQGISVIKNLTSHDLTRSFGSNNSGSQNQQNNAVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPNQDDNKLQSPSASKPTDIPGASVLRAEKPKVMQKLPSKPNFPASSPNGLKMPPIFDGSLGLGYNPSPFPFWPHAPPGFPGLPVEFSQRNPGTSGSFPPNNESFFASQMMQRLQEESARLPGPARKDPLLDPAREMADIYDGAVGANGSFLEGIIRSSLERPGHRSGSGEAESDGEAVRRRLRPDDLLLAEEMREAARRLRARETGAPPPPTQPHPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00675059;
- 90% Identity
- -
- 80% Identity
- -