Laur015571.1
Basic Information
- Insect
- Limnephilus auricula
- Gene Symbol
- retn
- Assembly
- GCA_951813805.1
- Location
- OX638402.1:29834321-29835656[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-15 1.9e-11 44.8 0.0 16 79 61 122 44 123 0.83
Sequence Information
- Coding Sequence
- ATGGGACATTTAGCAAGCCGATGGACATCTCCTCAAAAAGGAACAACGGGACCAGTTCATGAACGGGAGGCCGTTAATGTTCGCCGGAGGGTATTTGTGTTTTATGGAGATTTGCCTAATTCTTACTGCAATATTGAGAATCTAGATACCTACTTCCATAATTGCGATTCTGAGAACGTTGAAAGAACCCCAATCAACAGACTTCCCATCATGGCCAAGTCGGTGTTGGATCTGTTCGAGCTGTACAACCTGGTCATCGCCAGGGGAGGCCTGGTTGACGTCATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGACTTCATCTGCCATCCAGCATCACATCGGCTGCCTTTACACTGAGGACGCAGTAA
- Protein Sequence
- MGHLASRWTSPQKGTTGPVHEREAVNVRRRVFVFYGDLPNSYCNIENLDTYFHNCDSENVERTPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -