Laur025654.1
Basic Information
- Insect
- Limnephilus auricula
- Gene Symbol
- ARID5B
- Assembly
- GCA_951813805.1
- Location
- OX638416.1:2901984-2929121[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-15 3.8e-11 43.9 0.0 2 89 223 305 222 305 0.85 2 2 2.1 8.4e+03 -2.1 0.0 35 48 908 921 899 924 0.81
Sequence Information
- Coding Sequence
- ATGGACGAGGTGGTGGCAATCAGCGAACGGGTGGTGGTTCGCGCAGAGGAGCTGCTATCGTGGGCGGCGCGCGGCGCAGGATCCTGGCCTCGCGGGCTGAAGGCCGCCTGGGCTCCGCCCCCGCCCGGAGAGACTCCAGAGCCTGCGCCCCCGCCGGATCACCGTCTGGACTTCACTGACATCAACAGAGAAAAGGGACTCATTGCGGACCCCATGGCGGCGTGCGTGGTGGTTTTTTCCTACCCGCGCTACTGCCGCTACCGCGCCATGATGCGGCGGCTGCAGGGGCTCGAGGGTCACTGGCTGCGGGACTCGCTGGTGGTGGCGCTGGGCGGGTACGCGCCCCCCTCCAGTAACACACTCATCCTCTACTGCCGCGAGACTTTTGAGTATCCCGAGTTGGAGGGACACGAGTTTGTGTGCAACCACATGGCCCCCCGGCTGAAGGGACGCGTTGGTCGGGGACGCAGGCGGCGGGTTCGCTCCGCTTCCAAGTCCTCGGAGAGTGATAGCGGAGCCAGTGCACACCGTCCCAGCACCCCGCAGACGACCCGTTCCTCCCTTCGATCATCGGCGCCTTCGCCCATGTCGCCCAGCGAGGTGGACAAGGACAGGGACAGAGGGGAGAGGGAGAAGGAGAAGGGCGAGGAGAAGGAGGGTACTGAGGAGCGCGCCTTTCTGCGCCGCTTGCGCATCTTCCATCAGCGCGGGGGCGGCAGCCAGGCACGAGCTTTGGGCTCGCGAGGCAAAGACCTGAGTCTACACCGCGTGTACGAGTCGGTGAGACGGGCTGGCGGTTATGACCATGTGACGAGGACACGTGGCTGGCGACGTCTTTTAGGTTCCCTCGGTGCCGTGGGACATCAGGCCACCATGGCGAGGCGCAACTATGAAAGACTGTTGCTGCCCTTGGAGCAGTCGGAGCGCCGCACCACCCAGAGCACCCCCCAGTCCCAGGGCACTCCCCCCGGCAGCTCTACGGGCACTCCCCCCGGCAGCTCCACGGGCACCGCCAGCTCGGTCAGCACCCCGCTGGTGCGCCCGCCGCGCAAGAAGCAGCACCTCGCGGGACTGGCCAGCCAGGCAGTCACCATCGCTACTATTGACATCTCGGATTCACCTGTACGCGAACTAGACGGACTCACAGgttcTTCAACTGAAAAGACACCGGTTCCTCGTCTGCAGACTCCTCCGCCCGGCAAGCGGAAAGACCAGAAGAAGTCGGAGACCACCGTCAACGGAGATAAGAAGTCGGCCGACACGGTGAAACGGAAGATCCTCGAAGAGGAGCAAGTGGTCTCCGTCAAAGAAGACAAGAAGTCATCGGCGCCCAACGATTTCGACCCGTCCAATATTTTGGACGGCGGTTTTGGGGAAAATGACGAAGACGCTTATCCTAAAGAGGGTTACGACTATGTGAAGGTTTCTCGGCCAGCGGCGGACCTGAACCAGGAGTTCCTGGACTCTCTGCCCGGTCTCACCGAGGACCCGGAGCCCAAGGAAGAGCCGCGGGTCAGCCACATCAGCCTGGTGCCACCGGAGAAACTCCTGGCCGACAGTCAGCTAAACGGAGGCACTCTCGCTGCCACTCCTGATAAGGCGACTCCGACCAGATCGCGTCCCTCCAGTCTGCGCAGCGTTCGCGTCAAGCCGGATCGGCGTCAGGCGCAGGGCTCCCCCCCCTCCCTCTCTTCCTCCAGCACCCCCACCCCCGTGCCCCCTCCACACAACCCTCCGTCAGACGACGACCTCATCGAGGTCCCCTACAAACCCAAGTCCCCCGAAATCATCGATCTCGATCTCTACGAATCGCCGGAAAGTCCCCAAACCGCGTCCAAACGCAAGAAATTGGACATTTTGAAGCGCGGAGGACTTGAAGTTACGGCTGTGCGAGGTTGGCCAGGTCTAGACCCAGCATTCCAACAGCAAATCTTAAATCAAGCTCACTTCTTGCAAGTCTATGGAACATTCGCTACAAACGCTGAAAGTTACGCCCCCCCACCCGTTACTCAAGCCAAGTCTATATACGGCACGTCCAGTCCAGAAAAGACGGTCTACGGCAATCCTAAAGACCCGTTCATGCCTCCCCCGCACGTGCTGCAAGGCGCTGCACCCCGTAAAGTTCCGTGCGCTCAAAGAACCGCCACCGCAGCCGACGTATTAGACCTAACCATAAAACCCGCCGTGGAAATAGTTAGAGTTCCCGGCGCCCCGGAACAGCCGCAGAATCTTTCCGCTCGCCGAACTTCAACGCCTGAACTTCGCCAGGTAAACTCGGCGCTCGAGATAACTCTCGTCAACAAGAACCACAGTAGACACAATAACAACAGCGGCAGTAATAACAGTAGCAACAGTAGTAATAACATCAATCGGACGCCTCAAAAGCGCTCGTCGACCGGAAAATTCATGTCAAACAAAGGCGGAATGTACGCCAATCATAATAATCATCATAATTCGACGATTCCGCCGCTAGTCCCGCGTAGTGCATCAAACAAATCGTCCAATCCTGGTCTAATAATCCCGAATTATCAAGTTTCTAGTTCGTCGAGCGTATCGCCGGTGAGTTCGGGGGGCGGTAGCAACATGGCGTCGCTGCTGCAAGGAGCGGGGGGCAGCGTTGCCCCTGGAGGTCGAGCACCGCTGCTTGACCCTTCGCTTTACATGAGTGCACTGTACGGCAGCCTGGGGCACCTAGCCCCCGGTATATCGGATCGCCAGCTCGCACTCTATTCGCAGCTCGTCAAACTCGGCGGATATCAAatgCACCGGTACTACAGCAGCCAGCCACCAGCCTCCAGCAGATGCGGCAGACTGCTCTACAATCTCAGCAGACTGCCGGCTATCACGTCCCATCACTAA
- Protein Sequence
- MDEVVAISERVVVRAEELLSWAARGAGSWPRGLKAAWAPPPPGETPEPAPPPDHRLDFTDINREKGLIADPMAACVVVFSYPRYCRYRAMMRRLQGLEGHWLRDSLVVALGGYAPPSSNTLILYCRETFEYPELEGHEFVCNHMAPRLKGRVGRGRRRRVRSASKSSESDSGASAHRPSTPQTTRSSLRSSAPSPMSPSEVDKDRDRGEREKEKGEEKEGTEERAFLRRLRIFHQRGGGSQARALGSRGKDLSLHRVYESVRRAGGYDHVTRTRGWRRLLGSLGAVGHQATMARRNYERLLLPLEQSERRTTQSTPQSQGTPPGSSTGTPPGSSTGTASSVSTPLVRPPRKKQHLAGLASQAVTIATIDISDSPVRELDGLTGSSTEKTPVPRLQTPPPGKRKDQKKSETTVNGDKKSADTVKRKILEEEQVVSVKEDKKSSAPNDFDPSNILDGGFGENDEDAYPKEGYDYVKVSRPAADLNQEFLDSLPGLTEDPEPKEEPRVSHISLVPPEKLLADSQLNGGTLAATPDKATPTRSRPSSLRSVRVKPDRRQAQGSPPSLSSSSTPTPVPPPHNPPSDDDLIEVPYKPKSPEIIDLDLYESPESPQTASKRKKLDILKRGGLEVTAVRGWPGLDPAFQQQILNQAHFLQVYGTFATNAESYAPPPVTQAKSIYGTSSPEKTVYGNPKDPFMPPPHVLQGAAPRKVPCAQRTATAADVLDLTIKPAVEIVRVPGAPEQPQNLSARRTSTPELRQVNSALEITLVNKNHSRHNNNSGSNNSSNSSNNINRTPQKRSSTGKFMSNKGGMYANHNNHHNSTIPPLVPRSASNKSSNPGLIIPNYQVSSSSSVSPVSSGGGSNMASLLQGAGGSVAPGGRAPLLDPSLYMSALYGSLGHLAPGISDRQLALYSQLVKLGGYQMHRYYSSQPPASSRCGRLLYNLSRLPAITSHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -