Laur013425.1
Basic Information
- Insect
- Limnephilus auricula
- Gene Symbol
- osa
- Assembly
- GCA_951813805.1
- Location
- OX638400.1:14955860-14996206[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-26 1.3e-22 80.6 0.0 3 89 359 442 357 442 0.94
Sequence Information
- Coding Sequence
- ATGCTGCTGATTGAGGGAGTTCGCACAGAACACGTGTCCGGCACACGGCCGCGGCTCATCTCTGAGTTGACGGGCCAGAATAGTAATGACTCCAGTAGCGGCGGAGGGGGCGGGGGCAGCAGAGAGGGGCTCCTGAGGCCCTCCCCCAGCCCCACAGGCTCTACCGGCTCGAGGTCCATGTCACCGGCTGTCGgGCAACAAAACATTCCGATGCCTCCGCGGCCGTCCAGCAGTAGCCAGTCGGAGGGGGGCGGAGGCGCGGGCGTGAGGGCCGCTCCCGCTCCCGGGCCGGGTCCCCTGGCGCAGGCCCCCGCCCCGGGCCCCCCGCAGCAGCAGGGCCCCTACCCTCCCCCGGGCTCCTATAAGATGCCGCCACACCACCAGCCCTACCCGCCGCCGCAGCATCAATACCCTCAAGGAAATTATTCTCCTCGACCTCCCTACCCTAACCCGAATGCGGGGTACGGAGGCGCAGGAGCTGGAGCTGGAGCAGGTCAATACGGGGCACCAGGCCGGCCGCCCGCACCGGGAGGTCCCCCCGGCCCACCTGCACAGCAGCAGCCCTACCCTGGCCCTGGTCCCGGAGGCTATCCCGGTCCGGGAGCCACGTGGGGCGCACGCGCACCTCCCCCGCCCCCCCACTACCTCAAGCAGCACTTGCAGCAGAGGATGGGTCCCCCGCCTCCCCAACCACACGTCATGGGGCCCCCTGGGGACCCACCTCAGCAGGATAACGGGCCCCCGGCCACGGCACTCGTTACCACGGGGCCTGATGGGGCGCCCTTGGATGATGGATCGCAACAGAGTACTCTATCAAACGCTTCAGCAGCGTCAGGTGAAGAGGGCAGTAGTGGTGGCGGTAGATCGGGCGGCCGCGGGGGCCCAGGAGGCGCCCCATCGCCCGGAGCAGCCTCACATGCCGGGGCTCACGAAGACTACGAGCCCAGCCCTTCTGCGTGGCCCCGAACACCCTCTAGTCCCGTATTTAATAGTCATGTACCACAAGAAAACTATAGGACCAAGAAGTCGGATTCGCTGGGCAAGCTGTACGAGATGGACACGTGTCCCGACCGGCGCGGTTGGGTGGAGCGCCTGCTGGCCTTCATGGAGGAGCGACGCACTCCCATCGCCGCCTGCCCCACCATCAGCAAGCAGCCGCTGGACCTGTACCGCCTCTACTTGCACGTGCGCGAGCGCGGGGGCTTCGTGGAGGTGACGAAGAACAAGACGTGGAAAGACATAGCGGGGCTGCTGGGCATCGGCGCGTCGTCGAGCGCAGCTTACACGTTGCGCAAGCACTACACCAAGAACCTGCTGGCGTACGAGTGCCACTTTGACCGCGGCGGCATTGACCCACAGCCCATCATCAACCAGGTGGAGGCCACCACCAAGAAGAAGGCCAGCAAGAACAACAGCGTGCCTAGTCCAGGTTCATCCAACTCACAGGACTCGTTCCCGGGCGGCGGGGGCCCCCCTCCCCCCGGTGGGCCCCCCTGCGAGGGCTACGGCCCCACCTACTCGGCCTACCCCCCCGCGGCGCAGGCCCAGCAAGGGGGCGGTGGGGGCCCTGCCGGGGACAACATGGCCGCCTCCAACCCGTTTGAAGATCCGCAGCCCCGACGGAACCACCAGCCGGGTCCAGGAGTCTATCCCGGGCAGCAGGGCTATGGTTACGACCAGTACGGCTCGGCCTATCCTGCCAACAGACCAGTCTATCCTCCCTACGGACCTGAACAAGATGGAAGGGGCTACCCGGCAGCAGGAGGTGATCCCTATTCCCGCTACGGTGCTGGCTACGGGGGCTCACCGGGCGGAGCAGGTGGTGCCGGGGGCACCAGGGGCTACCCGCCTCCCCCAGGGGGACCTCCTGCACCCTCCCCAGGTCCTCCGGGCCAGGCGCCCCCTGTGCCCCCACAGTCTCCCACGCCGCCTCCGCCTACTCAAGGGGGCGCCAATCCTCCTCAAGACTACTACAGAAGTCCGCAACAGCAGCACGAGATGTCCTCGGTGAACATGAACTCGCAGCTGGCTCGGCAGCTCGTGGCCCCCCTGTCCCCCGGAGGGCCCCGCCAGTACCACGTACGTCCGCTACCACCTACCTACTCCATGGGGGCTTGCTGGGCTGGGCGTGGCACTATTTTCCAACCATAG
- Protein Sequence
- MLLIEGVRTEHVSGTRPRLISELTGQNSNDSSSGGGGGGSREGLLRPSPSPTGSTGSRSMSPAVGQQNIPMPPRPSSSSQSEGGGGAGVRAAPAPGPGPLAQAPAPGPPQQQGPYPPPGSYKMPPHHQPYPPPQHQYPQGNYSPRPPYPNPNAGYGGAGAGAGAGQYGAPGRPPAPGGPPGPPAQQQPYPGPGPGGYPGPGATWGARAPPPPPHYLKQHLQQRMGPPPPQPHVMGPPGDPPQQDNGPPATALVTTGPDGAPLDDGSQQSTLSNASAASGEEGSSGGGRSGGRGGPGGAPSPGAASHAGAHEDYEPSPSAWPRTPSSPVFNSHVPQENYRTKKSDSLGKLYEMDTCPDRRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLHVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEATTKKKASKNNSVPSPGSSNSQDSFPGGGGPPPPGGPPCEGYGPTYSAYPPAAQAQQGGGGGPAGDNMAASNPFEDPQPRRNHQPGPGVYPGQQGYGYDQYGSAYPANRPVYPPYGPEQDGRGYPAAGGDPYSRYGAGYGGSPGGAGGAGGTRGYPPPPGGPPAPSPGPPGQAPPVPPQSPTPPPPTQGGANPPQDYYRSPQQQHEMSSVNMNSQLARQLVAPLSPGGPRQYHVRPLPPTYSMGACWAGRGTIFQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -