Basic Information

Gene Symbol
Xbp1
Assembly
GCA_951813805.1
Location
OX638394.1:1386305-1388972[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-12 1.6e-09 38.3 10.5 2 53 43 94 43 95 0.97
2 2 0.00051 0.65 10.7 5.0 28 60 83 115 82 119 0.91

Sequence Information

Coding Sequence
ATGAATACTCCAATAATCTTCGCTTTATCCAAGAATTTCCACCCATCGAAAATGAGCCAAGAAGTTTGCGTTAGTGAAACATCCCTCAGCATGTCGAGAAAGCGAAGATTGGACCACTTATCATGGGAGGAGAAGCTTCAACGAAAgaAGTTGAAGAACAGGGTGGCCGCGCAAACATCGCGCGACCGCAAGAAGGCCAAGATGGACGACATGGATGATCGTCTGCGGCTGATGGAGGTATCCAATCAGAAGCTGTCGGAAGAGATGAGGAGTCTGCGTGAGTTGAACGAGAGACTGTTGAGCGAGAATAGAGAGCTGAAGGAGAGGTTAGGTGCTTGTGAAGTCGGGAATGCGGCCCCTGTTGGACCAGCCGCGTCCCCTCTGCCGCAGGAGGGCCCCGCGCCCCCGGCTCCACAAGCACCCCTACCCCTCCTGGCGCTTCTCTGCCTCCTCTACAAGATCTCATCTCCCAAATCGACTCGGACGAGTACCTCAACTGTCTTGAACAACTTGCCGACAGCCTACTCCGAGAAATTGATTCAGAAGATCTTGACTCGAATCCAATTaAGTCGGAAAGTAGTCCAGAAGAAAGGATCCCTTTACCAGAAGTGGTGGGGTCCTCACCAGAGCACCTGGAATCCAATGAAGCTGAGagtttag
Protein Sequence
MNTPIIFALSKNFHPSKMSQEVCVSETSLSMSRKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKAKMDDMDDRLRLMEVSNQKLSEEMRSLRELNERLLSENRELKERLGACEVGNAAPVGPAASPLPQEGPAPPAPQAPLPLLALLCLLYKISSPKSTRTSTSTVLNNLPTAYSEKLIQKILTRIQLSRKVVQKKGSLYQKWWGPHQSTWNPMKLRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-