Basic Information

Insect: Limenitis camilla
Gene Symbol: stc
Assembly: GCA_905147385.1
Location: LR990236.1:2924178-2931555[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 3e+04 -4.3 1.6 15 19 493 497 492 497 0.81

2 14 0.067 9.8e+02 0.6 1.7 2 10 525 533 525 533 0.92

3 14 3.7e-05 0.55 11.0 18.1 4 19 541 556 539 556 0.93

4 14 1.2e-08 0.00017 22.2 14.3 1 19 592 610 592 610 0.97

5 14 2 3e+04 -4.3 1.8 8 11 615 618 614 619 0.86

6 14 3.9e-05 0.57 10.9 16.1 1 19 651 669 651 669 0.99

7 14 6.5e-05 0.97 10.2 13.6 1 19 710 732 710 732 0.87

8 14 2 3e+04 -4.8 1.7 6 10 762 766 762 766 0.95

9 14 0.0024 35 5.2 7.3 1 12 772 783 772 783 0.94

10 14 0.043 6.3e+02 1.2 0.3 4 10 787 793 786 794 0.93

11 14 3.7e-06 0.055 14.2 14.0 3 19 801 817 799 817 0.92

12 14 0.037 5.5e+02 1.4 17.2 1 18 856 872 856 873 0.81

13 14 2.1e-07 0.0031 18.2 13.8 1 17 909 927 909 933 0.83

14 14 0.0079 1.2e+02 3.6 9.0 1 12 939 949 939 962 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	3e+04	-4.3	1.6	15	19	493	497	492	497	0.81
2	14	0.067	9.8e+02	0.6	1.7	2	10	525	533	525	533	0.92
3	14	3.7e-05	0.55	11.0	18.1	4	19	541	556	539	556	0.93
4	14	1.2e-08	0.00017	22.2	14.3	1	19	592	610	592	610	0.97
5	14	2	3e+04	-4.3	1.8	8	11	615	618	614	619	0.86
6	14	3.9e-05	0.57	10.9	16.1	1	19	651	669	651	669	0.99
7	14	6.5e-05	0.97	10.2	13.6	1	19	710	732	710	732	0.87
8	14	2	3e+04	-4.8	1.7	6	10	762	766	762	766	0.95
9	14	0.0024	35	5.2	7.3	1	12	772	783	772	783	0.94
10	14	0.043	6.3e+02	1.2	0.3	4	10	787	793	786	794	0.93
11	14	3.7e-06	0.055	14.2	14.0	3	19	801	817	799	817	0.92
12	14	0.037	5.5e+02	1.4	17.2	1	18	856	872	856	873	0.81
13	14	2.1e-07	0.0031	18.2	13.8	1	17	909	927	909	933	0.83
14	14	0.0079	1.2e+02	3.6	9.0	1	12	939	949	939	962	0.81

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATTCATATACATATAATAATCAATATCAGGCTCCCAATACTTGGAATGGTGATTACAATAATCAATATGTCAATCAACCTTTCTATCCCAATAGACAATACGACTCTAGCAGTCAATATGTAAGTTTTGATGAATTCCTATCTCAAATGCACATCTCAAACGTTCCTCAAACAAATCCTGCTAATTTTAATAATGTACAATACCAGAACTATCCTAATGCTCAATTTAACAACATGAATAGTTTTCAAAATAGTTCTGCACCACCTAATCCACAGGCTGAATATAATATGTATGGATCAAACAGTGCCAATTATGTAAATAGTGAAGAAGCTTACCGTCAAAGTGTTCATGAGCAATATAATTCAGGAAGATCAGAACAAAATAATTATACAAATGAAATGGTGTCTAAATCAAAACTTACAGCAACTGCAACAGAATTTATTCCTAAACACTCTAAAGAAAAACCTCCCAGTAGTCCTCTTAATGAATCGCTCCAGGAATCAAGCTCATCAAGTACAGCTTTAAGTGAATCATCTAGGAATAACTCAAAACCATCATCCAGTTCAAGAAATTGGAGGGAAAGACCTCAAAGCGCCCAACAAAGTAGTACATCTTATGCAGAAACTAATTCATTCCAAAAACCTTCCAAAAGCATTGAATCTAATAATAAAAGCAATAAGTTAGAATCAAGAAGTCGCAATCAAGATTTTCATAACAATCATTCTGAATCTGCTAATCATAACAATAAGTCCAGTAAAGACTCCTCAAACCGTCCCAATGAATCAAATAATCGCAATCGTAAATCCAAGAATCGTTCAGCAGAAACTAATCAGGATTCAGTTTACCGCAGTCAAGATGCTCAAGAACATGGTAACCAACACAGATCTGATCGTAGCATAGCATCCAGTAGTTATAACCAAGACTCTAGGGCTTATTATGATGATGAAAGTCATGCACAGGAAAGTAGCTACTATGAAGGGGGCCAATCTAAACATTCAAGGAATAAGAACGAAAAAAAGGAGTCTGATGTAGGTCGTACTTTTTACAATAGCGCAATGCCTAAGGAAAGTCAAGATGTGAGGAATGGAAGAGATTCTTCTGGAAGGAATCGCAAGTGGGCTGGTAGTCAAAGAGTTAAAGCTGCAGAACGAAGCAGCGTTGACGATGAATACTATGCTAATTCATATTTACAATACAAAGATGAAAGAGTAAAAGATTATAATATGAAAAGTCCAATGAAGGCAAAACCCAAATCTGCTAACACTGCAGCAAATACTGAAATGACACAGCGTGAGCGTCTCAGTGAACAGCTTGATAAAGGAACTCTCGAGTGTCTGGTCTGCTGTGAAAGAGTAAAACAAACAGACACAGTATGGTACTGTGACAACTGTTATCATGTATTCCATCTCCGTTGCATTAGAAAGTGGGCCATGAGCAGTATGGTTGAAACCAAATGGAGATGTCCAGCTTGTCAAAACACAAACCAGGACATACCAACAGAATACAGATGCATGTGTGGTTCCACACGCAATCCTGAGTACCAGAGAGGTTCCAGTGGAGCCCATACTTGTGGCAAATCATGTAAAAGACCAAGAAACTGTCCTCATCCTTGTACATTGCTCTGTCACCCTGGTCCCTGCCCACCTTGCCAAGCTACTGTTAACAAGCAATGTGGTTGTGGTGCTGAAACCCGATCAGTTCTATGCAGTAGCAAGCTACCTCAAGTGTGTGGACGTCAATGTGCTCGTAAGCTTGAATGTGGTGTGCATACCTGTACTAAAGACTGCCACGAGGGACCCTGTGATCCCTGTACAGAAACTGTTACTCAAGTTTGCCATTGTCCCTCTGCAAAATCTCGCTCAGTGCCCTGCACATCGGAGACCGGTAACTGCTTCACCTGGTCCTGTGCTGTAGAGTGCGGGCGCGTGCTGTCGTGTGGTGCTCACGTGTGCCGCACCCTGTGCCACCCGCCGCCCTGCCCACCCTGTCCATTGCGCCCCGAGAATGTACCCACATGCCCTTGTGGGAATAATCGAATCAAAAAAGACCAACGTAAATCATGCACTGATCCGATTCCCCTGTGTGGCAACATTTGCGCTAAACCACTACCTTGTGGACCTCATGGAGATAAACATTTCTGCAAAGATAAATGTCACGAAGGTAGTTGTCGCGTATGTCCTGATACAACTCTGCTTCAGTGCCGCTGTAGCCACTCCAGTCGTGAAGTCCCTTGTGCAGATTTACCTGAGATGTATAATAATGTGCTGTGTCAGAGGAAGTGTAACAAGAAATTGTCCTGTGGTCGTCACCGCTGTCGTACTGTATGTTGCGACACGCAATCTCACCGATGTGCGGTAGTGTGTGGACGCACCTTATCCTGCCAGCTACATCGTTGTGAGGAGTTTTGTCACACTGGTCACTGTGCTCCTTGCCCTAGAGTCAGTTTTGAGGAGCTGCGTTGCGAATGCGGCATAGAAGTAATCCTACCACCAGTCCGCTGCGGCACTAAGCCCCCAGCCTGCAACGCGCCTTGTCGCCGTCAGCGCGCATGTGGTCATCCCCCGCACCACAGCTGCCACTCCGGGGACTGTCCGCCCTGCGTAGTTCTTACCACCAAAATGTGCTACGGGAAACATGAGGAACGTAAAACAATCCCATGTTCTCAAGAAGAGTTCTCATGTGGTATGCCATGTGGCAAGCCTTTGCCATGCGGAAAGCACAGTTGTATCAAAACTTGTCATAAGGGACCCTGTGACGCTGGCAAATGCACCCAACCTTGCACCGAGAAACGACCAAACTGCGGTCATCCTTGTGCAGCAGTGTGCCACTCCAGTAGCAAAACCGCGTGCCCCAGCGGAGCCCCCTGCAAGCGACCCGTCCGAGCCACTTGCGCCTGTGGCAGGCGATCGCAGGAGCGCCCATGTTGCGATAACGCAAGGGACTACGCTAAAATGATGAGCACATTGGCTGCTTCTAAAATGCAGGAAGGAGGTACAGTTGATTTATCGGATTCACAACGTCCAGCAAATATGTTAAAAACGTTAGAATGTGACGAAGAATGCTACGTGGAAGCCCGCAGCCGGCGCTTAGCCCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACTGTCGCACTACTGCCACACGCGAGCCGGCTTTCGCGCAGCTCGTTCACGATCGCCTTACTCAACTGGTGCAGCTCGCGAAGAAGTCGAAACAAAAGACACGAGCCCATTCGTTCCCATCAATGAACCGACAAAAGCGACAGTTCATTCATGAGCTGTGCGAGCACTTCGGTTGCGAGAGTGTGGCCTACGACGCGGAGCCAAATAGAAATGTAGTTGCTACTGCTGATAAGGAAAAGTCGTGGTTACCAGCAATGAGCGTATTAGAAGTGTTAGCGCGTGAAGCAGGCAAGCGCCGAGTGCCAGGGCCTGTACTGCGGACCCCTGCGCAACCAGCAGCTGCCCCTACTACTGCACCACAGACTGTAGCGGCTCCTAAGACATCTGGAGGCTGGGCTACACTAACATCAAACAACGCATGGGCGGCACGAAGCCAGGCTAAGCAGCAACCCAAGATAGACTACTTCGATAATCCACCGGAAAACTGA
Protein Sequence: MSQWNNSYTYNNQYQAPNTWNGDYNNQYVNQPFYPNRQYDSSSQYVSFDEFLSQMHISNVPQTNPANFNNVQYQNYPNAQFNNMNSFQNSSAPPNPQAEYNMYGSNSANYVNSEEAYRQSVHEQYNSGRSEQNNYTNEMVSKSKLTATATEFIPKHSKEKPPSSPLNESLQESSSSSTALSESSRNNSKPSSSSRNWRERPQSAQQSSTSYAETNSFQKPSKSIESNNKSNKLESRSRNQDFHNNHSESANHNNKSSKDSSNRPNESNNRNRKSKNRSAETNQDSVYRSQDAQEHGNQHRSDRSIASSSYNQDSRAYYDDESHAQESSYYEGGQSKHSRNKNEKKESDVGRTFYNSAMPKESQDVRNGRDSSGRNRKWAGSQRVKAAERSSVDDEYYANSYLQYKDERVKDYNMKSPMKAKPKSANTAANTEMTQRERLSEQLDKGTLECLVCCERVKQTDTVWYCDNCYHVFHLRCIRKWAMSSMVETKWRCPACQNTNQDIPTEYRCMCGSTRNPEYQRGSSGAHTCGKSCKRPRNCPHPCTLLCHPGPCPPCQATVNKQCGCGAETRSVLCSSKLPQVCGRQCARKLECGVHTCTKDCHEGPCDPCTETVTQVCHCPSAKSRSVPCTSETGNCFTWSCAVECGRVLSCGAHVCRTLCHPPPCPPCPLRPENVPTCPCGNNRIKKDQRKSCTDPIPLCGNICAKPLPCGPHGDKHFCKDKCHEGSCRVCPDTTLLQCRCSHSSREVPCADLPEMYNNVLCQRKCNKKLSCGRHRCRTVCCDTQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCECGIEVILPPVRCGTKPPACNAPCRRQRACGHPPHHSCHSGDCPPCVVLTTKMCYGKHEERKTIPCSQEEFSCGMPCGKPLPCGKHSCIKTCHKGPCDAGKCTQPCTEKRPNCGHPCAAVCHSSSKTACPSGAPCKRPVRATCACGRRSQERPCCDNARDYAKMMSTLAASKMQEGGTVDLSDSQRPANMLKTLECDEECYVEARSRRLALALQIRNPDVSAKLAPRYSEHCRTTATREPAFAQLVHDRLTQLVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRTPAQPAAAPTTAPQTVAAPKTSGGWATLTSNNAWAARSQAKQQPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -