Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0035 13 6.2 0.0 3 12 25 34 24 35 0.89

2 5 0.0035 13 6.2 0.0 3 12 57 66 56 67 0.89

3 5 0.0035 13 6.2 0.0 3 12 89 98 88 99 0.89

4 5 0.0035 13 6.2 0.0 3 12 121 130 120 131 0.89

5 5 1.2 4.3e+03 -1.9 0.0 5 12 155 162 153 170 0.80

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0035	13	6.2	3	12	25	34	24	35	0.89
2	5	0.0035	13	6.2	3	12	57	66	56	67	0.89
3	5	0.0035	13	6.2	3	12	89	98	88	99	0.89
4	5	0.0035	13	6.2	3	12	121	130	120	131	0.89
5	5	1.2	4.3e+03	-1.9	5	12	155	162	153	170	0.80

Coding Sequence: ATGATGATAATACTAAGACCATATCCTTCTCAATCTTTATACGATCAAGACCAAGATTGTCCTAATCTTTATAATTGTAAGACCAAGACTACGCCAATGATGATAATACTAAGACCATATCCTTCTCAATCTTTATACGATCAAGACCAAGATTGTCCTAATCTTTATAATTGTAAGACCAAGACTACGCCAATGATGATAATATTAAGACCATATCCTTCTCAATCTTTATACGATCAAGACCAAGATTGTCCTAATCTTTATAATTGTAAGACCAAGACTACGCCAATGATGATAATACTAAGACCATATCCTTCTCAATCTTTATACGATCAAGACCAAGATTGTCCTAATCTTTATAATTGTAAGACCAAGACTACGCCAATGATGATAATATTAAGACCATATCCTTCTCAATCTTTATACGATCAAGACCAAGATTGTCCTAATCTTTATAATGGTAAGACCAAGACTACGCCAATGATGATAATACTAAGACCAAATCCTTCTCAATCTTTATACGATCAAGACCAAGATTGTCTCATGTTTGAAATAGCAAGACCAAGAATGTCCTAA
Protein Sequence: MMIILRPYPSQSLYDQDQDCPNLYNCKTKTTPMMIILRPYPSQSLYDQDQDCPNLYNCKTKTTPMMIILRPYPSQSLYDQDQDCPNLYNCKTKTTPMMIILRPYPSQSLYDQDQDCPNLYNCKTKTTPMMIILRPYPSQSLYDQDQDCPNLYNGKTKTTPMMIILRPNPSQSLYDQDQDCLMFEIARPRMS

Sequence clustering based on sequence similarity using MMseqs2