Basic Information

Insect: Limenitis camilla
Gene Symbol: -
Assembly: GCA_905147385.1
Location: LR990251.1:1128568-1146732[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.3 6.5e+02 1.8 0.1 2 21 465 484 464 486 0.81

2 14 0.0031 0.27 12.4 0.0 1 23 496 519 496 519 0.97

3 14 0.039 3.5 9.0 3.8 1 22 629 650 629 650 0.94

4 14 0.03 2.7 9.3 3.8 2 23 711 732 710 732 0.95

5 14 0.93 83 4.6 0.6 1 23 744 768 744 768 0.89

6 14 0.00013 0.012 16.7 0.6 2 23 775 798 774 798 0.96

7 14 0.059 5.2 8.4 0.2 1 23 804 826 804 826 0.93

8 14 0.0018 0.16 13.1 3.3 1 23 832 854 832 854 0.98

9 14 0.19 17 6.8 0.1 2 21 865 884 864 885 0.89

10 14 0.038 3.4 9.0 1.4 1 23 963 985 963 985 0.98

11 14 1.7 1.5e+02 3.8 7.2 1 23 992 1014 992 1014 0.95

12 14 0.0012 0.1 13.8 1.8 1 23 1049 1072 1049 1072 0.95

13 14 0.0015 0.13 13.4 1.3 1 23 1079 1102 1079 1102 0.98

14 14 0.039 3.5 9.0 0.1 2 23 1124 1146 1123 1146 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.3	6.5e+02	1.8	0.1	2	21	465	484	464	486	0.81
2	14	0.0031	0.27	12.4	0.0	1	23	496	519	496	519	0.97
3	14	0.039	3.5	9.0	3.8	1	22	629	650	629	650	0.94
4	14	0.03	2.7	9.3	3.8	2	23	711	732	710	732	0.95
5	14	0.93	83	4.6	0.6	1	23	744	768	744	768	0.89
6	14	0.00013	0.012	16.7	0.6	2	23	775	798	774	798	0.96
7	14	0.059	5.2	8.4	0.2	1	23	804	826	804	826	0.93
8	14	0.0018	0.16	13.1	3.3	1	23	832	854	832	854	0.98
9	14	0.19	17	6.8	0.1	2	21	865	884	864	885	0.89
10	14	0.038	3.4	9.0	1.4	1	23	963	985	963	985	0.98
11	14	1.7	1.5e+02	3.8	7.2	1	23	992	1014	992	1014	0.95
12	14	0.0012	0.1	13.8	1.8	1	23	1049	1072	1049	1072	0.95
13	14	0.0015	0.13	13.4	1.3	1	23	1079	1102	1079	1102	0.98
14	14	0.039	3.5	9.0	0.1	2	23	1124	1146	1123	1146	0.95

Sequence Information

Coding Sequence: ATGGCAGATCCTCCTCCACCATTAATTCTTTGCATGGATAATATAAATGGAGAAGAGGTTTCATTGAAGATTGAACAACATGATACCTTTGAAAGGTTTCTAGAAAAATCCAAAGTACTTCTGGGGTATGATATTGATTTAAACTTAATAACAGGCAATCACCCAGTTTCTTTAAATGAAAATGCTTATACGTTTTTACTAAACACAGAACAAAATCTAACCAATTCAAGTCTAAATCCTTCTAATTATGATCAAGATCATGATCAAAGTGGAGCTAATGATTTAGTCTATATCTTAGACGACGGCACACAAATAAGAGCATCCCAAATACAATTTGATAATGAAGATCCTTTAATTGATTTGACCCTTGAGAATATACCTTTTATTAAATATGCTGATGTTATTGATGAAATAGATGAAATTGATTATGGTGATCGTACCATTAAAGATATAAATATATCAAGTCCTGTATCACACAAAAATAGCCCTAAATGCAACTTTGCCAATACTCTTCCATTTAAATTAGTATGTAGTAATGCATCTGCATTTGAATTACAATTCACCAAATATCTTGAAGAGAGATCTTATACACCTTTACAAACGGAGAATAATAATAAATCGCCTAGAACTTTAATTAAAGATAATTTTAAAAATTTGGATAATATAAATCGTGATAGTTACACTCGTGAAGATATACTTAACATGTTTAAAAATTCTCCTGTTACTCCTCTCCCGTATGATAGCCAAAATTGTGAAAAACGGAGACACGTTCGTAAAACAGATCCCTCTAGAATTGTTTACAAAAATTTAAGTGCTAAGCCAATAACTGATATAGATATTAATGATAAACATGGTTGTTTTGTTTGTGGTAAAATTATTAGTAATAATGAAAAATTATACATATTTGATAGAGAAGATCAAATGCTACATCGTTGTGAGCAAAAGAAATATACACAACTGAAAGTAATATGTGAAATGTGTTTATCTGAAAATTTTGTAGCTAGTCCGTTAAAAAGTCCGGAACAATCTTTGAATAACGATGAGTATTTGGTGATTAAAAATAATCAGCAGTATATATTCCAAAAGATAACTTCAATTAGTTTCAAAAAGACCTTTAAACCAAAGGTTGTTGATGAACATGTAGTTGAAGAGCGATCAGAGTTTGTGAAGGTAGAAATTGGGCCTGATGGAGAGATTATTACTAAACCAATAGATAATGATGAAAAATCTGATGATGTTATATTAATAAGAGATGATAATAAGGAAAGTTACAGTGATGTTGAGATAATAGAGCCTGAACCTGAAATTGATTTAGATAATATCGAAGAGGATGAAAATGTGAAGGAGTTTTTGGGAAAGTACCAATGTGTAAATGCTACTGTTGAACAATTAAAATGCAGGTTTTGCGACACAATATTCCAAGATTATATAGCTGTAATGGATCATGGAGAAGAACATCAGCATAATTTAGAAGATGGTGTCGTTTTTCCTTGCCCATTGTGCGATTATGGTTATGCTAACATAAAATGGCTGAAAGGACATATCAAAGTAGCTCACAATAATAAAAAAACAGAAGAAGTGTTAACTAAGGAAGAAGGAGATAGTGATAAATCTAAATCTATTGCAAGTTCTCCAGTTGCTAAGAGAACTAGAAGCGCAATAAAGAAAAGTGAAGGTGATAATGGAAATGGTACACAAGAATATCAAGAAATTAAGGAAGTCCATGCAAATGTATCGACTGACTTCACATTTACAACGGAAATCAAACAGGAGTGTTTAGACAGTGATGATTCAATATGGATAGTTCAAACTGGTGATGATGAACAGTTGCAGAATTTATTGAAGGTGGAAGAAGAAAGTGGAAGTATTAAAAACTTGAAAAAGCATAAATGTTTTAAATGCAGTAAAATATTTCCAAACGCGAAAACTCTGTCAGTACATAAATGTACAAAGAGAGGACGGAAAAGGAAATCGTTACTGAAGGAAGACTCGATTTTGATTGTGCCCTCTAAGGAGGATTTTATAAAGAGAGCTCAAGGAAGACCTCGTCGTGAATCTGATAATAATGATTTATTAGTTGTGAGAACGCGCAAAAAGAGAACTCGTAAATCAAGCGATTCCCAAATAGTGACTTGTCATAATTGCAATGAGTCCTTCACTTCCAAAGTTAGACTTAAGTTTCATATGCAATTTCATGATGCGACAGACCTTCAAACATCGGACGGACAATATAAGTGTTCAGAGTGTGATGGCGCCGAGTTCCCGACGGAGACTGAATTATTTGATCATGTGCACTTCCAGCATGATAAACAAAAGCGATGGCAGTGTCCGGTTAAGGGTTGTGGGAAGACTTTCTTTTTAAGGGCAACACTAACGAAGCATAGTCGCACACATACAGACACGCGACGATATGTTTGCGTTACCTGCGGGAAACGGTTCCTCGATAAACAAACCCTGGATGAGCATGGAGTTACGCATTTAGAGATAAAACCATTCCAATGTCACATATGTTTGAAGCAACTGACTCGTCGATCTCGTCTCCGAATGCACTTGAGAGCTCATGAAGAAGAATTATCACCAGCTTTGGTTCTCGTTTGCGCTATTTGTGAGAGAGCTTTCAGAGATCATACTGATGCTCAGGAACATGCAAACAAATCAGTGGAATGTATAGAAGAGTTCACTAAAGAATTTAAAGAAGAAACTGAAGTGAGGCAACAACTGTCGCCTACTAGTGGGATTATTAGGAATACTTTAAAAATAGGTGAATTCCCTCGGCTAACCCACGGTATAGAGCGCCAAGTTAACACCGAAGAAAGTGAAGCTTTACTCGCTCCGTTAGACGATGTCGCTAGAAACATTATTCGAGTTGTTGATATTGAAAAGGCGTTTAGATGCGAATATTGTGAAGATGTATTTTATGTAGAAGAAGCTCTCAACAATCACAGACACAAACACAAGGGAATAAAAAATCCTTTCACGTGTCACATTTGTAAAGTGAGCTTCGCTACTTACTCCAGATGTACAACACACAAAACTACCCACGGTTTCTACAAACGTGTCACGACTGAGACGCGGAAAGAGGGTACTTCAGGTCCGGCGAGTTCGGGGATTCTTGGTTATGGGGGATTCCCCGTTGTTAAACATTTCTTGTGTGAGGATTGTGGCCGCTCTTACCTACACTGGACTTACCTCCAAGTACATCGTCGTATGAAACACGCAAACGAACATTACGTGTTTAAGTGTAACCAGTGTGAAATGACTTTTCCTAACAGCTGGAGTGTAACATATCATAGAAAGAAAATACATAAAAAAACAGGACAAGATGAAACTGGAGGCTTCACGAAAATTATACGAGAGAACTATCGTATTCCATGTCGTGATTGCGACGCCATATTGCCAAATAAAACGGAACTTTACAAACATAGAAAAAATGTACACTGCGACGACTCCATGCAAGTTATTACGAAAGGTGCGTACGCAAACCTTAGACACAGAGCTACAGCATTACTGCTTGATTGA
Protein Sequence: MADPPPPLILCMDNINGEEVSLKIEQHDTFERFLEKSKVLLGYDIDLNLITGNHPVSLNENAYTFLLNTEQNLTNSSLNPSNYDQDHDQSGANDLVYILDDGTQIRASQIQFDNEDPLIDLTLENIPFIKYADVIDEIDEIDYGDRTIKDINISSPVSHKNSPKCNFANTLPFKLVCSNASAFELQFTKYLEERSYTPLQTENNNKSPRTLIKDNFKNLDNINRDSYTREDILNMFKNSPVTPLPYDSQNCEKRRHVRKTDPSRIVYKNLSAKPITDIDINDKHGCFVCGKIISNNEKLYIFDREDQMLHRCEQKKYTQLKVICEMCLSENFVASPLKSPEQSLNNDEYLVIKNNQQYIFQKITSISFKKTFKPKVVDEHVVEERSEFVKVEIGPDGEIITKPIDNDEKSDDVILIRDDNKESYSDVEIIEPEPEIDLDNIEEDENVKEFLGKYQCVNATVEQLKCRFCDTIFQDYIAVMDHGEEHQHNLEDGVVFPCPLCDYGYANIKWLKGHIKVAHNNKKTEEVLTKEEGDSDKSKSIASSPVAKRTRSAIKKSEGDNGNGTQEYQEIKEVHANVSTDFTFTTEIKQECLDSDDSIWIVQTGDDEQLQNLLKVEEESGSIKNLKKHKCFKCSKIFPNAKTLSVHKCTKRGRKRKSLLKEDSILIVPSKEDFIKRAQGRPRRESDNNDLLVVRTRKKRTRKSSDSQIVTCHNCNESFTSKVRLKFHMQFHDATDLQTSDGQYKCSECDGAEFPTETELFDHVHFQHDKQKRWQCPVKGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLEIKPFQCHICLKQLTRRSRLRMHLRAHEEELSPALVLVCAICERAFRDHTDAQEHANKSVECIEEFTKEFKEETEVRQQLSPTSGIIRNTLKIGEFPRLTHGIERQVNTEESEALLAPLDDVARNIIRVVDIEKAFRCEYCEDVFYVEEALNNHRHKHKGIKNPFTCHICKVSFATYSRCTTHKTTHGFYKRVTTETRKEGTSGPASSGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANEHYVFKCNQCEMTFPNSWSVTYHRKKIHKKTGQDETGGFTKIIRENYRIPCRDCDAILPNKTELYKHRKNVHCDDSMQVITKGAYANLRHRATALLLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -