Lcam012539.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- zfy1
- Assembly
- GCA_905147385.1
- Location
- LR990235.1:1682453-1690381[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 7.6 6.8e+02 1.8 0.2 2 23 6 27 5 27 0.93 2 14 4.3 3.8e+02 2.5 0.0 9 21 194 206 192 207 0.89 3 14 0.012 1.1 10.6 1.4 1 23 1093 1116 1093 1116 0.91 4 14 9.3e-06 0.00083 20.4 2.2 2 23 1213 1234 1212 1234 0.97 5 14 0.00011 0.01 17.0 2.9 1 23 1240 1262 1240 1262 0.98 6 14 2.2e-05 0.0019 19.2 4.3 1 23 1268 1290 1268 1291 0.96 7 14 0.56 50 5.3 1.9 5 23 1304 1322 1302 1322 0.97 8 14 0.011 1 10.7 1.3 3 23 1329 1350 1328 1350 0.96 9 14 0.047 4.2 8.7 0.1 2 23 1367 1387 1366 1387 0.96 10 14 0.00096 0.086 14.0 1.3 1 20 1393 1412 1393 1415 0.89 11 14 0.0063 0.56 11.5 1.3 1 23 1423 1445 1423 1445 0.98 12 14 0.0057 0.51 11.6 7.2 1 23 1451 1473 1451 1473 0.98 13 14 6.7e-06 0.00059 20.8 1.3 1 23 1479 1503 1479 1503 0.98 14 14 0.001 0.093 13.9 5.1 1 23 1509 1531 1509 1532 0.95
Sequence Information
- Coding Sequence
- ATGGATCAAAGAGTTCAGTGCCCTGTGTGTACACTGTATCTCCACAGTGGGATGTCCTTGGCGTCACATTTAGATACACATCCAAAGGATCAAATGATAAAAGCATTATGTAATTTGTCAGCAAAAAATGGAAATTTTGGGAGTAGAAGCACCACTCCTGCCAACTCTGAGAGGTCATATAGAAGTAGGTCACGGACACCAGCTACAGATGACTGTGAACGTTGGAGGAGCCACCACAGAAGCAGTGAAAGTGATAGGTACTGGCGAAGGACACCCAGTCGATCAAAAGCAACTCCTCTTTCTAGTAATTCTAGAAATCCAACTCCGCTTTCTAGTAATTCTAGAAATCCAACTCCACTTTCTAGTAATTCTAGAAATCCAACTCCTGATATTAGGATGGTTAATATGTCATATGATAATAACAATTCTAACAATAACTCCAGCCATTGTTCTGATTCATACACTGTGAACTCTGATAAGACACAAGAGATATATTATGGCTCTCATGGACAGTCCTCAATTTCTGATTTTGATCAACAATATTCTTATTATCCTGAGCAACATGATGATGCTGAAATAAAGTTTTCACGTAGTTATGAGTACAATGCACACATGGAACAGCCTAATAATTTATTTGGCTACAGTATGCCAGGAATGGTTCCAGGTAACTTAGGAAAGTTACCAACACCTATAATGCCAACAGTGCCTAGAAGAGGTAACAACTCTGTGAAAATGATACCCAAACAGGGAAAGATATCTAAACCTAATATGGAAGAAATGCAGTACATGTCTCCTGTGACAAAACCAATGCATGTAATGATGCCTGCCCCACCTCCATTTGTACAAAAAAATTTAATTGTTTCTGGAAATTTACCTGGTACTCCAATATTAGACTCAAAATCTATGACTTCTACAATTAACCCATTAAACAATCACTTTAATCAACTCAGCACAGGGGCTTTCACACCAGGAACTACTGTGGTCACACAAAACTCACAAATTATTTATAGGGAAATGGTTCATAATTTAGATGGTAAGCCTTTTATCTCAAATATGCCTCCTGTACTTGGTGGTCCCGACAATGTAACAAATGTAGCCCAAAGTAGTTCATTATATCAAAATGTAATGGTGGTTGATCAGTATGGAAAATCCTCATGCACATATACAAGCCCTCAACGTTTAATATCAAAATCGCATAATTCTGCCACTAGCGAGAGTACTCCATATATGCAAAATCGTCCAGACAAACCTGTGCAAAATATTGCCAATGAGGCAAACAAAACTCTTATTATTGAAGTTACTCCAATGTTACCACCAGCACAGCAATCTGTAAGTGAAGCAAGGACAACATCTCAGCTGCCACGGCCAAGTAATAAGCCAGTAAGTAAAAAAATTCAACAAGAAAAGCATGAACGTAAAAATGATTCTCCTGGTCTAAATAAAGGTTTGAAGATTCTTAGTAATATTAAGGTAGAGGTGCCTGTACAGCATCACAAAAATATGCTTAACACTGTCCTGGATCTCACTGGTTCAGCTGATTCTGATTACCCTGATCCTCCAACTTCTCCAGAGAAGATTTTGCCAGACTTGGAGAGTAAACATGTTGTTGATGATTGCACTCAACAGTCAAATGCTAGCATTGATAGTATAGCATCCAACACATTCATTGCAATTAAAAATTCCTCAAATCGTTCATTCAAGGATTCTCCAAAATCTACTGACATTGAAACTAAGTTAGATACAGAGTTTTCTGATAGTTGCCCTGTTCCCGACCTTATTTGCAATGAGAAGCCATCCATATCCCCATGTAGTGAGTTGTCAGAACATGGAGATAACTCTACAGACCGCACCATATTGTCTCCGAAACCTAAATTGTCTCCTAAACCTGAATTATCTCCTAAACCTGAATTGTCTCCTAAACCTGAATTGTCTCCTAAACCAGAAAAGTCTCCTAAACCTGGAAAGTCTCCTAAACCTGGAAAGTCTCCTAAACCTGAAAAGTCTCCTAAACCTGAAAAGTTTCCTAAACCTGAAAAGTTTCCTAAATCAGAATTGTCTCCTAAACCTGAAAGTAGTCATCTATATCGAAATTCACTATGTGCAGAGATTAAAAAGAAACCTAGCAGGCAACAAAAAAGCAATCTACTAAGGCTTAATAATATTTTTGTGAAAAAACACAAGAAAGTTTTGCAAATAAAGAATTCAAAATTAGGTCCTTCAACTAGCATTACAAAGCTAGAACAAGAGCCGAAGGCTTCATCTTCTTGTAGAAAATCCCCTGAAGACTTTTCAATAACGAAAATATATCAAGCTGAAGCTGTTGTGGACACAAAAGCTACATTAGAAGCCATTCCCATAGAAAAGATTAAAGACAATGACACTGATGACAATGATTGTAAAGTATTTGATGCTAACACAGAGGAGCAGTCTATGGATATTGAACCAATTACTCCATCAGATGTGAATAATTCTCATCAATTTTCTACCAATGTGCATTTGGTGTCCGTCAAAGAAGAAATAAATTCAAGTAATGAGTTTAGTAATGAAACTAATAGATCTTCCGATATTATGACGATGGCGACTCTCCGGCCAATTAATGTAATAAACTACAGCAATATAGCGGATTTTGATGATGATTCAAATCACAGAGAGCTTTTAGACCTAGAGGCTGCATCGAAAAACAAGCAATTTGTGTCTATGATAAATGAAAATTATTTTGGTGACAATATTTATGCAGATTATTTTACTCCAGATAGAGGAGAGACCTTCGAAGCACAGAAGGAATCAAGTTATGGAAAAGATATTGGTAAAGAAGGAATGTATGTTTGGGGCGAATCTTCTCAGAAGGAGAGTGATTTTGTTTTACCAAATTTCATTCATGAAAGTTATAAGATTGCTGAGAGTAATGAGATAGATTATTCTGAGTTGGGGGCTTGTGATGAGCACATAGATGTAGACGGTGATAAGTGTGAAAGAGATAGCAAGGCGGATGTGTTAAGCGAAAGTAGAAGCGAGGGAGAGCCGCCCCTAAATATATGCGCAGATGAAAAGATGCCGCCACGAGGAGAACTTAGCGGGCAAGAGAGCAACGGAGACATGGAGTCGCCTTGGAGTGGGATGTATTCTGGAGTACCACCAGCAGAACCCTATGACCTCATGGCACGTGAAAGTTGGGTGTCGGATGGATCAGATATTGATGTTGGTGAAAAAGTAGAAAATCTGGAAGAAGATCTCCAATTCCCTAAGGCGCGTGTGGGGAATTTGTTGGGGGGAATGCATAATTGTGTACAATGTGGGAACAAGTTCACATCTCTCAAAGAGCTACGTGCTCATAAATCTTTGGTTCATGCTATACCAACATGTTCAAATACAAAGACGACCTACAGCCGGTTGATTACGGCGAGAGCTATTAAAAAAGAGGAGAAGCCAGATGAACATGTTTTAGCAGGTAATCTTCTATCCTTAGATTCTAAAGAAACAATATCTTCCATGTATAACTTTGAAGAGAAACCTAAAATAGTGGGCTTACTTAATCAAGAGAAACAAAAGCGTAGGAGAGATTTTATATGTCCAACATGCAAAGTGGACCAGGTCACAGAGGTAGCATTCCATGCCCATCTCAAATTACATCCTCTGGAGTGTCTAACTTGTGGAAAATGTTTCTTTAGGCGGGCGAACTTGGCACTCCACATGAAGACTCATTTAGGGATAAAGAACTTTAAATGTGAAATATGCGAGAAGCGTTTCATAACGCGCCAGAAGCTGAACGAGCACCACAACATCCACACCGGCCGCACGCCTTTCAAGTGCACCATCTGTGATGAAACTTTCCGCAGATACTCCAATATGGTGCAGCACAGAAACCGCCATCATTTCAAAAAGAAGGCAAAAGTACGCGACTTCGTTTGTCATTGCGGTGCAGTATTCCACTCACGAGCGAAACTGCTCTGGCACAAGGAAACCCACGAAGAGAAACCAAAGGCGTGTCTGTACTGTAGTGACAAGTTTGTGCACGCGGCTTCGCTCACTAGGCACTTGAGGCGGTCTCATAATGAATACTTTTTGACTGATAAAGAGATAGCGAAAGGAGAAAATGTGCCTTGTCCTGTTTGTAAACAAATGTATCTCAGATCAAACATGCGAGCCCACCTCATAACACACAGCGGCAAACGTCCATTCAGCTGCATAATATGTAATAAATCCTTCACGACTAAGTGGAACCTAAAGCTGCATCGCTGGACTCACCTCAGTCGCTCTGCAAAACCATACAAGTGTAACCTGTGTAAGGGTGCCTTCATACGCCACACTGAGTATGTCTCCCACATGAACGCGCACAAGTCTGTTCGTCCTTACACCTGCAACTATTGTGGCTGTCAGTTCATTAGGAAATACAACTGCCAGCGCCACGTCCGCGAACACGAAATGGCCAAGAAGTATGTGTGTAAAGTGCCCGAGTGTGGTAAATCTTTTCATAGGAGTTATTATCTGTCTGAACATATGAAAGTGCATAGTGGTGCGAGACCCTTCTCGTGTAATATATGCGGGAAGACCTCCAGCAATAAGTCAAATCACAATAAACACGTTAAGATCCACCATGCGAGAGAACCGGTTGCAACAGAAGCATGA
- Protein Sequence
- MDQRVQCPVCTLYLHSGMSLASHLDTHPKDQMIKALCNLSAKNGNFGSRSTTPANSERSYRSRSRTPATDDCERWRSHHRSSESDRYWRRTPSRSKATPLSSNSRNPTPLSSNSRNPTPLSSNSRNPTPDIRMVNMSYDNNNSNNNSSHCSDSYTVNSDKTQEIYYGSHGQSSISDFDQQYSYYPEQHDDAEIKFSRSYEYNAHMEQPNNLFGYSMPGMVPGNLGKLPTPIMPTVPRRGNNSVKMIPKQGKISKPNMEEMQYMSPVTKPMHVMMPAPPPFVQKNLIVSGNLPGTPILDSKSMTSTINPLNNHFNQLSTGAFTPGTTVVTQNSQIIYREMVHNLDGKPFISNMPPVLGGPDNVTNVAQSSSLYQNVMVVDQYGKSSCTYTSPQRLISKSHNSATSESTPYMQNRPDKPVQNIANEANKTLIIEVTPMLPPAQQSVSEARTTSQLPRPSNKPVSKKIQQEKHERKNDSPGLNKGLKILSNIKVEVPVQHHKNMLNTVLDLTGSADSDYPDPPTSPEKILPDLESKHVVDDCTQQSNASIDSIASNTFIAIKNSSNRSFKDSPKSTDIETKLDTEFSDSCPVPDLICNEKPSISPCSELSEHGDNSTDRTILSPKPKLSPKPELSPKPELSPKPELSPKPEKSPKPGKSPKPGKSPKPEKSPKPEKFPKPEKFPKSELSPKPESSHLYRNSLCAEIKKKPSRQQKSNLLRLNNIFVKKHKKVLQIKNSKLGPSTSITKLEQEPKASSSCRKSPEDFSITKIYQAEAVVDTKATLEAIPIEKIKDNDTDDNDCKVFDANTEEQSMDIEPITPSDVNNSHQFSTNVHLVSVKEEINSSNEFSNETNRSSDIMTMATLRPINVINYSNIADFDDDSNHRELLDLEAASKNKQFVSMINENYFGDNIYADYFTPDRGETFEAQKESSYGKDIGKEGMYVWGESSQKESDFVLPNFIHESYKIAESNEIDYSELGACDEHIDVDGDKCERDSKADVLSESRSEGEPPLNICADEKMPPRGELSGQESNGDMESPWSGMYSGVPPAEPYDLMARESWVSDGSDIDVGEKVENLEEDLQFPKARVGNLLGGMHNCVQCGNKFTSLKELRAHKSLVHAIPTCSNTKTTYSRLITARAIKKEEKPDEHVLAGNLLSLDSKETISSMYNFEEKPKIVGLLNQEKQKRRRDFICPTCKVDQVTEVAFHAHLKLHPLECLTCGKCFFRRANLALHMKTHLGIKNFKCEICEKRFITRQKLNEHHNIHTGRTPFKCTICDETFRRYSNMVQHRNRHHFKKKAKVRDFVCHCGAVFHSRAKLLWHKETHEEKPKACLYCSDKFVHAASLTRHLRRSHNEYFLTDKEIAKGENVPCPVCKQMYLRSNMRAHLITHSGKRPFSCIICNKSFTTKWNLKLHRWTHLSRSAKPYKCNLCKGAFIRHTEYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -