Lcam005914.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- Znf711
- Assembly
- GCA_905147385.1
- Location
- LR990224.1:12000069-12020605[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.35 1.7e+02 3.0 0.0 13 43 182 209 177 210 0.77 2 10 0.11 52 4.7 1.9 12 29 243 260 237 270 0.84 3 10 0.55 2.7e+02 2.4 1.1 15 28 274 287 266 296 0.81 4 10 0.14 71 4.2 0.2 9 27 363 379 360 393 0.82 5 10 1.2 6e+02 1.3 1.6 18 38 441 462 439 462 0.81 6 10 0.00056 0.27 12.0 1.5 5 40 457 489 453 492 0.90 7 10 0.00026 0.13 13.0 1.4 19 41 507 526 501 528 0.92 8 10 0.65 3.2e+02 2.1 0.5 17 30 533 546 527 556 0.78 9 10 0.0013 0.63 10.8 2.6 14 40 558 581 550 584 0.83 10 10 0.029 14 6.5 0.1 18 39 590 608 587 614 0.75
Sequence Information
- Coding Sequence
- ATGGCATTACAAACAATGAATGTAAAAATAGAAGAAGTATGCAGGACATGTTTATCTAAAGAATTCAAAATGCTCTCGGTGTTTGAAGTACGCTTGGGAATGATTACTCTAGACAACGTAATCAACTCTATAACTGGTTTAAAGATAGCAGAAGGCGATGGATTACCATCAACAATATGTAATGATTGTAAGGAAAAGGTTGCCAGTGCATATGACTTCAAAAACCGTTCACTCGAAGCCGAACTCACTCTTAGAAGTCTATTAACAAGAGAAAATGGAAATGAAAATGTGGAAAATGAAATTACAGATTTTGAGTCTAATTCTGTGGAAATAAAAACTGAGCAGTTTACTCAACAAAATAATGATGGCTATATGGATTTAGACTTAACCTCAGCTCTTTCTCATTTTGAAGAATCCTATAATGAACTAGATTCAGTAAAATGTGAAAATGATATAAAACAAGACTTTGATATCACACATTCATCTGTAAGTGTCAAATCAGAAGATGGTACTAAAAACAAATCTTGGACTGTAAAAACTCTACAAAAAGACAGCACTTATTGCCCACTTTGTGGTGCAATCTTCAACGATGCTGAGGGTCTCACAAAACATGCCTGGGACCAACATGAAGATCTTATGGGACCCAAAAAACGTGGACGCCCTAAGAAATTACTTACTAGCACCATATTGATTAAACTATCGGAGAATGGGTACAATTTGAAATATAAGAAAAACAAAAAACATAATTGTATGTTCTGTAAGGAGAATTTTAAAGCCAAAGAGGATTTAATATTACATGTAGTAGCGCATGGAGATATAAAGACAATCAGTTGTCTGCTTTGCAAGAAGATATATTTAAAGAAAAGTTATTACGACAGTCACAACTGTGCTCCAGGCAAGAACCCTTTAGAACATCACAAGCAAAGTAAACCACCAGATGTTGAAGAAAAAGAAAGGCCTATACAATATAAGGAAATATTACTACAGCATTTATTGATAGATAGGGATTCGGCAAATATTGATTTTTGTGAACAATGTGGAGAGTTGTTTACCAACGGCGCCGATTTAAACAAGCATAAAGATCATGATCATCCTGAACTGTCTGTTCGATGTCATCTTTGTGATAAGGTATTTGCAACTCTTAAAAGCGCAGCGCGTCATAGAACAGTCTGCGCTCGGGTCGAACGCCAGTTTGCGTGCACTACCTGCGACCTTCGGTTTGCTCATGAAGTATCCCTCAATAAGCATATACTGAGCGCTCATACCGGCCAAAGTGTGTCTGTAAGGTTCATGGACAAAGATCGCACACCCCCACCACACAGATGCGAAATATGCAATAGACGATTTCACAGACAAGACTCCTTAACAAGACATGCAAAAACTCACAAACAAGTAGAAAAAATTTTCGAGTGTGATGTCTGCAGTAAAAAGTTTAACAGAAGAGACAACCTCAGGCAACACTTGCGTATCCACAAAGGGCCTGGTGAGAGAGGACCACCGAGTACCAGCACTTGTCTGTGCCTGTACTGCGGTCGAAGCTTCTCGAACTCTTCTAACCTCATCGTGCACATGCGGAGGCATACTGGCGAAAAACCTTACAAATGCGACTTCTGTGGTAAAGGTTTTCCTCGGTCTTCTGATTTGCAGTGTCATCGTCGTTCACACACGGGAGAAAAACCATGTGTATGCGGTGTTTGTGGTAAAGCATTCTCTAGAAGCAACAAGTTGTCTCGTCACATGCGCGTGCACACGGGAGTGAAGCCCTACAAGTGTCCGTATTGCGAGAAGGCGTTCTCTCAAAGCAACGACCTGACTCTTCATGTACGCAGACACACCGGGGATAAGCCCTATGTATGCGAAATGTGCGGAGATCGTTTTATACAGGGCACAGCGCTGCAGAACCACAGACGAGCGCACGGTCATTACCCGCCCTCTGCCGCACCAACGCTAACCCCCATCGTATATACAGTGCAAAACGTTACACAGAACCACTGA
- Protein Sequence
- MALQTMNVKIEEVCRTCLSKEFKMLSVFEVRLGMITLDNVINSITGLKIAEGDGLPSTICNDCKEKVASAYDFKNRSLEAELTLRSLLTRENGNENVENEITDFESNSVEIKTEQFTQQNNDGYMDLDLTSALSHFEESYNELDSVKCENDIKQDFDITHSSVSVKSEDGTKNKSWTVKTLQKDSTYCPLCGAIFNDAEGLTKHAWDQHEDLMGPKKRGRPKKLLTSTILIKLSENGYNLKYKKNKKHNCMFCKENFKAKEDLILHVVAHGDIKTISCLLCKKIYLKKSYYDSHNCAPGKNPLEHHKQSKPPDVEEKERPIQYKEILLQHLLIDRDSANIDFCEQCGELFTNGADLNKHKDHDHPELSVRCHLCDKVFATLKSAARHRTVCARVERQFACTTCDLRFAHEVSLNKHILSAHTGQSVSVRFMDKDRTPPPHRCEICNRRFHRQDSLTRHAKTHKQVEKIFECDVCSKKFNRRDNLRQHLRIHKGPGERGPPSTSTCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCVCGVCGKAFSRSNKLSRHMRVHTGVKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCEMCGDRFIQGTALQNHRRAHGHYPPSAAPTLTPIVYTVQNVTQNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897118;
- 90% Identity
- iTF_00897118;
- 80% Identity
- iTF_00897118;