Lcam008613.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905147385.1
- Location
- LR990227.1:4784227-4786422[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.24 7.2e+03 -2.6 1.7 71 104 45 79 19 106 0.56 2 4 1e-102 3e-98 328.8 7.2 2 218 214 422 213 422 0.93 3 4 0.11 3.4e+03 -1.6 0.0 66 106 423 462 418 476 0.34 4 4 0.093 2.8e+03 -1.3 0.4 193 210 619 636 579 680 0.54
Sequence Information
- Coding Sequence
- ATGGACGCAAGTCTTGTAGATTTGGCTCAAAAGCCAGACGAACCACAAGATTCTCCAAGCAAAAAAGAGTTGGTAACAGGGGAACAAGTCAAGGAATGTGTACTTGTAATAAAAGATGAAAAAAGTAGAGACAGTGACACAAACAGTGTAGATATTAATAGTAGTGATGAACAAAACAATCTGAATAGTAATAGTTCTCCATTCTATGAGAGCAGTGATAGTAAAATAGATTATGCCATTAAGTTAGAAGATAATGACACTTTAAGTGATATAGACGATATAAAAACAGACACTGCTTCGGCAGACAGCGAGGACTCAGCTCTTGGTAGTCTCCCACCTGATAGTGCACTTCATGAACGAGAAGAAGATGGTCAGGATCGGTCCGATGGTAGTGACTCGGGTCTTGGTTCAGAAACACCTGACGAAGCTAAAGTACCCATTTTTCATCTACAACTACCCTGTGTAAACGAAGAAAACAATGCACAAACAGCCACAGAGGAAAATAACGTTAAAATAATTAGTAACTGTAATAACCAAAATGTGGACCAACACTTTGTGTCAGCTATTAATAAACCCTTTAAAAGCACTCTTAAAAGAAAATGTGACATTGAAATTAGTGAAGAACCACAGAATAAGAGAAAAAAGCATAATATACAATTTGATAATGTTACAGTTTTCTATTTTCCTAGAGCGCAAGGCTTTAGCTGTGTGCCATCTCAAGGAGGCTCCACTTTAGGTATGGAATGGGAACATACTCATATACAGAAATTTACTTTAGCTGAACATGCATTAGAACAGAGGCGGTTACATAGACAAGTTTTACAACAACTAAAAAGTGAACGGCATACTTTACAAGGCGTTTCTCTCTCTTCTAGTGAAGATAGTGACACAGAAGAAGAAACGAGTGATATATCTGAATCTGAGTTAGACTTAGACAGTTATTACTTCCTACAGCCAGTACCAACAAGGCAAAGAAGAGCTCTACTAAGAGCGGCTGGTGTACGAAAAATAGAAGGTTATGAAAAAGATGAATGTAGAGATATAAGAACGTCTCGCGAATTCTGCGGCTGCGCTTGTAAAGGCGTTTGTAACCCAAATAATTGCTCGTGTAGTTTGGCTGGCATCAAATGCCAAGTCGACAGATTAAACTTTCCCTGCGGTTGCACAAGGGATGGATGTGGTAACACTACAGGTAGAATAGAGTTCAACCCCATGAGAGTACGAACTCACTTTATTAATACACTTATGCGAGTAAGTCTTGAGAAGAAAAATGAAGAAAATCAAGAAGCTGTTAAAAGGAAATGGGCTGAGACGCATAGTGTTAATGCTTCATGTCTGAACAGTACATATAAAAAAGAAAATAGTCATAACCATGAAGATGTTTCTGTATCCAATATAAACATGCCACAAAGGCTTGCCATGGAATCTTGCATAAACGTAGGTGGTTTTAGTAATATACATCATAACATGAACAATATAAGTAACAATCAAAATGACACATTTAATTTTAGAAGTGACTCTATAGATCATAGCGGTATACAAAATACTGTGTTGACCTTTGAAGAAAAATCCGATCACCGCAGTCACGACCCTTATACATCTAATATACTTCAAGGAAAAGGCCCGCCTTATTCTACAACAAGTGCAATGGAGTTTAATAATACGATGACGAATGATATGCAAAGATATCAATGCGATCTCAATTACTCTTACGACCAACACACCGAAGGTCATCATTTTAAAGGTTTGCAAAGCTTTTCCGCAGCTAGTTTTGAAGAGTTTGCTCATAGCTCACAGATGTCTATGCTTAATCACTATGGTCACATGTACGTGTCAGATTATATACAAAAGCCTAGTACGAGTATTGAACAAAATCAAATGCAGTACCAAAATCATTACATGTATAATAAAAACGCCGTCGAGTGTGCGTCTGAAAACAAAACGGACAATCACTACACAACTCTCATGACAATGCCATATCAACAAAGCAATAAATTGCAGGCTGTAGATAATGATGAGAATTGGTTTAGCCACAATACGCTGTTGAACTTGGATGATTCGGTTCAGATCGACCAAGAAACTCACGCGGTTCAGCCCGAGCCCGCCCCGACGCTGGCTGAGGGTGAAAATAGTGACACCACTGAAAACTTTGGCGAACTTATAAAAAAAACTATGGTAGAGTCTGTTACAGTGTAG
- Protein Sequence
- MDASLVDLAQKPDEPQDSPSKKELVTGEQVKECVLVIKDEKSRDSDTNSVDINSSDEQNNLNSNSSPFYESSDSKIDYAIKLEDNDTLSDIDDIKTDTASADSEDSALGSLPPDSALHEREEDGQDRSDGSDSGLGSETPDEAKVPIFHLQLPCVNEENNAQTATEENNVKIISNCNNQNVDQHFVSAINKPFKSTLKRKCDIEISEEPQNKRKKHNIQFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHTHIQKFTLAEHALEQRRLHRQVLQQLKSERHTLQGVSLSSSEDSDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPNNCSCSLAGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPMRVRTHFINTLMRVSLEKKNEENQEAVKRKWAETHSVNASCLNSTYKKENSHNHEDVSVSNINMPQRLAMESCINVGGFSNIHHNMNNISNNQNDTFNFRSDSIDHSGIQNTVLTFEEKSDHRSHDPYTSNILQGKGPPYSTTSAMEFNNTMTNDMQRYQCDLNYSYDQHTEGHHFKGLQSFSAASFEEFAHSSQMSMLNHYGHMYVSDYIQKPSTSIEQNQMQYQNHYMYNKNAVECASENKTDNHYTTLMTMPYQQSNKLQAVDNDENWFSHNTLLNLDDSVQIDQETHAVQPEPAPTLAEGENSDTTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -