Basic Information

Gene Symbol
RERE_1
Assembly
GCA_905147385.1
Location
LR990239.1:11890292-11895778[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-08 2.5e-05 25.0 0.4 2 45 126 170 125 171 0.92

Sequence Information

Coding Sequence
ATGGCCCAGAACCAAGGGGAGGTTCAAGTGACACCGACCCAGCCTGTAAAAGATAATAAAGATATTTACGCTTGCCTCCCTGATATACGAACCAACGGGCCACTCGGTCCTGATGAACCTTGTCCTGGTGGTGAGGAACTACGATGGTTACCTGCGCAAGCTACGGATAGAGATCTTGTTATGTATTTGAGAGCTGCACGCTCCATGGCAGCATTTGCAGGTATGTGTGATGGTGGATCACCTGACGACGGCTGTGTAGCAGCTAGTCGTGATGATACTACTATTAATGCCTTAGACGTTTTACATGACTCTGGATATGACCCAGGTAGAGCACTACAAGCACTTGTTAAATGTCCTGTCCCAAAAGGAATTGAAAAAAAATGGTCAGAGGAAGAATCTAAAAGATTTGTTAAAGGTATTCGACAATTTGGTAAAAATTTCTTTAAAATAAAAAAGGACTTGCTTCCCCATAAAGATACCTCTGAATTGGTTGAGTTCTATTATTTATGGAAAAAGACGCCTGGTGCTAGTAGTAATAGGCCACACAGACGAAGGCGACAGGCTTCCTTAAGACGTGTACGTAATACAAGAAACTCTCGTGCAGGAACTCCTAAGGAGCAAACTCCAGAGGCTACCCCTACTGTCCCTGATACTAATGGGTCTAGACCTTCCCCAAATCCTAAAGAAGCAGGTGAAATGAGTTCTGTTACAGAAGACGAAAATTCTGAAGATGACAGTGATTCAAGAGATGCAGGAGAACTGGCTAAGGTTGATAATGGAAGAGTTGATAGTCCTGAAGATTCACCAAGTAGAATGAGAACTAGAAATAAGTCTAAAGAACAAACTACTCCGAATGGAAAAAAGGGTCAAGATGAAAGTGATAATGACTCAAAATCTAAAAAGTCTAATAAGCCAAATACACAAAGTACAAATAATAGTATACAAGAAAAAGTTTTATCATCTCCTGTTAGTAAAGAAAATAAAAAGAAAGTAGTAACCAATGGTAAAGTTGATGTTTCCAAGGTTAAGAAACGTCTCCCAGATGACTCAAAACCAGAAAGTATTTTAGATGGTGATGTTCAAATGAAGAAAAAGAGAGCAGCAGATGCCCCTGAGAGTCCATCAGAAAGTTTAACTAATGACAGTTTTCCAGCAATGGATGAATCAGAAAGTGTTGAACCAGAACCAGAAGCATGCGATTTTAGTTTTAGTAAAACAGATAAGGAGAATACTGATCAAAATAAAGAAGTAGAACCAGAACAACCACAAAAGCCAATTGAGACACAAATCAAAACAGAAATAAATTCTGAGATTGTAATAAAATCTGAAACAGATGTGTTGCCTCCAATATTTAAAGTTTTGCCTGAAAAGGATGATAGAGTAGTTTTAGACTTAAAAACAGATTCAGCTGCACCCAAGAATTCTGAAAATATGGAACCAAGGCCAATTCCTCTGTTTCCTAAAACTGAACTGATTATACCTAAAGTTACACCAATGTCAACGGAGGTAATGGAAAAGATCAAAATTAAAGAAGAAATTGATTCAGAAGATCAGACACTTAATTTACAAAAAGAAGAGTTTCAAAAGGATCCTCTTGCACATAATTTTTCAGGACATGCATTAAGTCAATCAAGCAAACCACTTAATCTAGAAAATACAAATTATTTTGTAAAAGAGAATCATATTTATAATCCTAAACTAAATCATACTATTAAAATTGAAGGGGTTCCTACTAATATATTTAACCCAGCGAATATGACAAAAGATAATCAAATTTTGAGAAGTACAAAAGATTTTACTGCAATGCCACCATTTTCATATCCAGCTAATCTTAATTTTGCTCCTGACCCTAATAAGCACAACCCTCTTATGAATCCATTAAAGACAGTCATAAAGTTGGAGCCAAGAGATGATACTGCTGAAATGAAAAATCAAAACACTCCTGAAATATTTACAGCAACTATTTCAACTGCCAATAAAGTGGATTCACCTAGTACACCTCGATTAGACTCCATGCAGAGGATAAGTCCTTCGCCAACACCAGTGCGTGCAGCATCGCCACCACATATGGAACATCCGGTTGTTACAAATACTGAACCAATTTCGCCTGCAAATGTTCAGGATATGAAATCACAAGATTCTGATATGGATGATAAACAACCCACTGATTTAAAAACTCAACCTGTACCAAAGCTGGACAGTCAAAATGGAAGTTTACGACCTCCAATATTCCAACCACCCATTAGACCAGAAAATCTAGGAATAAGATCAACAGAAGCTTCTAATATGCCACCAGTATCTCTACAAAGTATGCCACCTCCATCTCTTAACCAACCTTCAATAACAGGACTTTTACCTCCTGGTCCACTTATTTCAGTAGGTAGTGGATCTAATGTTGGTCCATATGGTTTCATGCCAGCATCGTTATATGGCCATCCAGGTCACCCAGGATTAGATAAACCTGGATCTTTGCCTCCATTAATGCAACAAGTGCCTCCGTCACACAGTCATTCAGCATCAAATTTGATTTCACAACAATCTAATCAAAATGATCCATCTATGCCTCAAGATCTTAAAATAAAACAAGAAGTGCCTGATAATATACCAGCTAATCTATCTACACAAAATTTAGCTGATCCTCTTCAGTCATTAAAAGAAGTCAAAGTCCCCGGTTATCCAATCGGAAGTGCTATTGCACAACACTTAAGTACTGAAAGAGATAGAGAGTCGATATCAAGTGTTGAAAATAATAGTCGACCACCAAGTCAACCACATAATGAAACCTCAAATATGCCAAGTGCATTCCTTGGACCCAGAATAGAAAGTATAAAGAAGGAACCGGATTTCCTACATCAACCTCATATAACACCTGTCTCAACAAGTCAGGCCAGTGGGTCAGATACTACAAGTACATTACAACCTGTGAAGAGTCCACACACACCTACGCCTATTAAAAGTCAGCAAAGTCATAATGGAACACCTGGTCACCCCCATCGTTCGGCTACAACGTCACCTTTTTCAAGACATATTACCAGTCCATCTCAACCGAGACAAATTTCTGCTTCACCAATACAACCAAACACTCCAGTATCACATTCAGCCTTGAATTTGATGAATCCTACACCACTGTCAATACCAGCAACTATGGCAGGCCCTGTTATTCATTCTGGACAGCAACCTGGACATCCACCACACCCATTTGCTTCACCTTTACATCATCCCCATCATCCTCTACTACATCCGTCTTCCATCTTTCAACTCTCTGCTGCCGCAGCAGCCCATGCAATGCATCCTTATTATTCACATCCTCATCCAGGTTATTCTATGCCATACCCTTATCCATATGGTCCCTTACCTCAACACCATCCTATACCTCCAATGCATCCTGCTTCAAGTACACCAGGACGACATGACCCAGTGAAACCCTCTACAATAGAATCAACAACTATGTTGAGTGCTCATCATAGTACAAGTTCATCTGTGACAACAAGATCATTGAGAGAAATTTCAGAAAGTTCTGAAGATCCAAGAAATCCTAATGCAACCACTGAAAGGCATCAGTTGCATGAAACGACAATGACTCATCATCACTCTACAAGTCATCATAGTGCTGTACATACTAGTACAGAAAAGCAGCCCAGTCATGTGGGAGGGGGCACAAATCATACCCTTTCTATATCTCACTCTACTTCAAGTAGTTCATCACAATCAATCCAGCATAAAATTAACACCCAGCAAAAAACCAGTGCACATTCTAGTTCACCACTTCACCTATCAGCCAGTTTATCTCAAACAACAAGTACATCGTCAAGTGTCAATGTTTCAAATAATCATACTCACCACCATTCGCATCATCTCGCTCACCATCCAGAGCGACTTTCTCCGGCTGACTCTATGCTGCTTCGTCATCATCCTAAAATGTTACCAGGAAATCCAAATCATCTTATGATACAACCTCCTTCTATGGGTCATCCACTAGGCTTAGGTTTACCTCCAGGTCCAGGAGCCAGTTCAATCGAGAGTTTACGACTTCATGCTCAAGCTGCTAGCTTACAAGCTTCACATGCTAGATCGGGATCTCCTCATCAGTTACAACATGGTCATCCACATTTACGTGGGCCACCAAGACCAATACCAGATGAGAATCCTGAATTAAAACTTGAAACACAATCACAACCAGAAGAGGAAGAGATTCCGAGTCCAGCCCATATACCTCATGGACCTAGTCCAGAACCGAAAATCGAAGATACTGAATGTCACAGGTCACAATCTGCAATATTTTTGAGACATTGGAACCGCGGTGACTATAATTCATGCACACGAACTGATTTAATCTTTAAACCAGTTCCGGAATCTAAACTTGCACGGAAAAGAGAAGAACGGTTGAGAAAACAAGCAGAAAGAGATAGAGAAGAAAGGGAGAAGATAGCACAGCAAGCTCACAGAAAAATAGCTACTCCCGAAAAACCTGAAACCAAGCCTCCTTCCAGAGGCGCTATTGAAACTATAACATCGCCATATGATAGATTCCCTAGACCACCTGGCTACCCAGATACGCCAGCGTTGAGACAATTATCTGAATATGCCCGGCCTCATGCCGGCTTTAGCCCGGGAAATATTCGGCACTGTATGGATCCTATGCTTCAGTATCAGTTAAGTTCTATGTATGGAGCTGCTGGTGCAAGAGAACGACTAGAACTAGAACATCTCGAGCGAGAAAAACGAGACAGAGAGATTAGAGAGTTGCGAGAGCGAGAGCTTAATGATCGATTAAAAGAAGAGTTACTTAAAAATAATGTTGGACCCCGAGCGATTGATCCACACTGGCTCGAAATGCATAGAAGGTATGGAATGCCACATCCACCTCCTCAAGGTGCAATACCAGTGCAATTTGGCTTGTATCCGCCGGGCCATGGTCCTGCAGCGCTTTCCCAACTAGAGCGGGAGAGACTAGAAAGGCTTGGTATTCCGCCGGCTGGTGCTGGAGGACCACCACCTACAGTTCCAGTCACTGGAGCGCCTACTCATCACCCACATCACCCACACCCCGGAGTAGCAGCTGCACAATTAGAAGCTGCCGAAAGATTGGCATTGGCTGCAGATCCGATGGTTCGGTTACAAATGGCTGGAATCAATCCAGAATACCATGCACATACTCACGCACACACCCATGCGCATTCACACACACATTTGCATTTACATCCAGGCCAGCAGGCAGCACAGGCGCAACAAGATGCGCTTGGCCTAGGGCTTGGTGGTAGTTCTCCCTATAGGCCTCTCCCTCACCCAGACTTGCTCGGCAGGCCGTACGCGGAGCAGCTGGCGCAACAAGCGGCCGCTCATGAACAGCTACAGAGGCAGCTGTTGCTTGAGCGTGAACGAGGCTTCCTGCATCCGGCGCACCACGAGGAGTTCATGCGGCAGCAGCGCGAGCGTGAGCTGAAGGTGCGGGCTTTGGAAGAAGCGGCACGGGCCTCGCGTCCGTAG
Protein Sequence
MAQNQGEVQVTPTQPVKDNKDIYACLPDIRTNGPLGPDEPCPGGEELRWLPAQATDRDLVMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDVLHDSGYDPGRALQALVKCPVPKGIEKKWSEEESKRFVKGIRQFGKNFFKIKKDLLPHKDTSELVEFYYLWKKTPGASSNRPHRRRRQASLRRVRNTRNSRAGTPKEQTPEATPTVPDTNGSRPSPNPKEAGEMSSVTEDENSEDDSDSRDAGELAKVDNGRVDSPEDSPSRMRTRNKSKEQTTPNGKKGQDESDNDSKSKKSNKPNTQSTNNSIQEKVLSSPVSKENKKKVVTNGKVDVSKVKKRLPDDSKPESILDGDVQMKKKRAADAPESPSESLTNDSFPAMDESESVEPEPEACDFSFSKTDKENTDQNKEVEPEQPQKPIETQIKTEINSEIVIKSETDVLPPIFKVLPEKDDRVVLDLKTDSAAPKNSENMEPRPIPLFPKTELIIPKVTPMSTEVMEKIKIKEEIDSEDQTLNLQKEEFQKDPLAHNFSGHALSQSSKPLNLENTNYFVKENHIYNPKLNHTIKIEGVPTNIFNPANMTKDNQILRSTKDFTAMPPFSYPANLNFAPDPNKHNPLMNPLKTVIKLEPRDDTAEMKNQNTPEIFTATISTANKVDSPSTPRLDSMQRISPSPTPVRAASPPHMEHPVVTNTEPISPANVQDMKSQDSDMDDKQPTDLKTQPVPKLDSQNGSLRPPIFQPPIRPENLGIRSTEASNMPPVSLQSMPPPSLNQPSITGLLPPGPLISVGSGSNVGPYGFMPASLYGHPGHPGLDKPGSLPPLMQQVPPSHSHSASNLISQQSNQNDPSMPQDLKIKQEVPDNIPANLSTQNLADPLQSLKEVKVPGYPIGSAIAQHLSTERDRESISSVENNSRPPSQPHNETSNMPSAFLGPRIESIKKEPDFLHQPHITPVSTSQASGSDTTSTLQPVKSPHTPTPIKSQQSHNGTPGHPHRSATTSPFSRHITSPSQPRQISASPIQPNTPVSHSALNLMNPTPLSIPATMAGPVIHSGQQPGHPPHPFASPLHHPHHPLLHPSSIFQLSAAAAAHAMHPYYSHPHPGYSMPYPYPYGPLPQHHPIPPMHPASSTPGRHDPVKPSTIESTTMLSAHHSTSSSVTTRSLREISESSEDPRNPNATTERHQLHETTMTHHHSTSHHSAVHTSTEKQPSHVGGGTNHTLSISHSTSSSSSQSIQHKINTQQKTSAHSSSPLHLSASLSQTTSTSSSVNVSNNHTHHHSHHLAHHPERLSPADSMLLRHHPKMLPGNPNHLMIQPPSMGHPLGLGLPPGPGASSIESLRLHAQAASLQASHARSGSPHQLQHGHPHLRGPPRPIPDENPELKLETQSQPEEEEIPSPAHIPHGPSPEPKIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLIFKPVPESKLARKREERLRKQAERDREEREKIAQQAHRKIATPEKPETKPPSRGAIETITSPYDRFPRPPGYPDTPALRQLSEYARPHAGFSPGNIRHCMDPMLQYQLSSMYGAAGARERLELEHLEREKRDREIRELRERELNDRLKEELLKNNVGPRAIDPHWLEMHRRYGMPHPPPQGAIPVQFGLYPPGHGPAALSQLERERLERLGIPPAGAGGPPPTVPVTGAPTHHPHHPHPGVAAAQLEAAERLALAADPMVRLQMAGINPEYHAHTHAHTHAHSHTHLHLHPGQQAAQAQQDALGLGLGGSSPYRPLPHPDLLGRPYAEQLAQQAAAHEQLQRQLLLERERGFLHPAHHEEFMRQQRERELKVRALEEAARASRP