Lcam024598.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- SMARCC2
- Assembly
- GCA_905147385.1
- Location
- LR990245.1:6599728-6607272[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 1.6e-11 44.8 0.1 3 44 530 571 528 573 0.95
Sequence Information
- Coding Sequence
- ATGATAAAAGTGTTCATGGACATGAAGCCAGGCGGGTCCCTGTCCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCTTCGCGCAAAGACTTGAATGTACAAATGATGATGGAGATCGAATCTGCATTATTGAGAGCTGAACTTATTAGATCTCCTTGTATCTTCATACGACCAGAAGTGGATAAAACTACCGCTAATAAAGTTAAGGACATCATTGTTAATCATCAAGGCGAAATATGTGAGGACGAGGAAGATGCAACTCACATAATATACCCTGCCGTGGATCCATTGGAAGAAGAATACGCTCGGCCAGTGTTTCGGCGCGGAAACAACGTCCTTGTACACTGGTACTATTTCCCAGACAGCCACGATACTTGGGCGCAAGCAGATTTACCTGTAGATGTACCAGACACCGCTAACTGGGACTGCAACCGCGCGGAGCCCTGGCGTGTTGCTGCAACGTGGGCTCTTGATCTCCCTCAATACAACGAGTGGATGAACGAAGAGGACTATGAAGTTGACGTTAATGGGAAGAAAAAGGTGGTGCACAAATTGCGTTTATCAGTCGATGATTTAATACCGGGAGGAGAACCCTCTGGCAAAGGGAAAAAGGGTAAAAGAAAGCGATCACCTTCACCTCCTCCACAAAAGCACGGGAAAAGGAAGAGTCGGATGGCGAAGCGTCGCGATAATGACATAGATGAAGAAGAAGACAATGCTTCTAGAGACAATACTGATGTTGCGCCAACGCCGGACAGCGAGAGATCCACTGACGCTCCACCAGCAGTATCAACAGCTCCAACGACGTCAACGCAGTCGGCCCCCGTGGAAGCCCCTGCCCCCGCGCCTGCTCCAGAGGCACCAGCGACTCCAGCACCAGCCATGGACGCGCACGACGACTCGCAAGGAAAACATAGCGATTCCAATACACAGGAAATGTTGACTAAAGAAGAATTAGAAGACAATGTAACAGATCAAACCCATCACATTGTAGTACCTTCGTATTCAGCGTGGTTCGATTACAACTCCATACACACAATAGAAAAACGGGCTTTGCCAGAATTCTTCAACAGCAAAAACAAATCCAAGACTCCTGAAATTTACTTGGCTTACAGAAACTTCATGCTAGACACATATCGATTGAACCCTACGGAATATCTAACCAGCACTGCGTGTCGACGCAACTTGGCAGGCGATGTTTGCGCTATTATGCGTGTACATGGTTTTCTGGAGCAGTGGGGACTTATTAACTATCAAGTGGAGGCAGAATCTCGCCCTACAGCCATGGGTCCACCGCCCACGTCTCACTTCCACGTATTATCCGACACACCCTCTGGCTTGCAGCCATTACAGGCAAGACCAACACAGCCTAGACCAGCTGAGAATGCGGCTGTACCTAAAGTTGAAGCAGGTCTACCTAATGGAACTGAAGCGGGACCTCCAATTAAGACTGAGCCAAGTGTGAAGCCAGAGCCAGCAATCGAACTTGGTACGACTCCTGGACTCAAGATGGATCAGTATCGAGGTGGAGCACGAGGCCGTGAATGGACAGAACAAGAAACTCTTCTGCTACTAGAAGCATTAGAGCTACACCGAGATGACTGGAACCGTGTAGCAGCGCACGTTGGCACCAGGACGCATGACGAATGCATCTTGCACTTCTTGAGGTTGCCGATTGAAGATCCGTATTTGAATGATACCTCTTCTAGCGGAGTCCTCGGTCCTTTAGCCTACCAGCCGATACCATTCAGCAAGGCTGGCAACCCCGTGATGAGCACAGTGGCTTTCCTTGCTTCAGTTGTGGATCCACGTATCGCATCCAAGGCTACTAGGGCTGCTATGGATGAATTTGCTGCTATTAAGGATGAAGTACCAGCTGCCATGATGGAAGCTCATGTGAAAGCAGCCGGGACACACGGGCCTTCCGCTGCTCTTGCAGCTACTGGCATCGCTGGGACTGCGCCGCCTCCGCCACCTAATGCTACAGGTGAAAAGAAGGAAGGTGGGGTAGAAGTGAAAACTGAAGCGATGGAGGTGGATGGTGAAGCTGAGGCTAAAGTCAAAGAAGAGCCCAGCGAAGCTCCTCCAGCGGAGGACGTAAAGGAGCCTAAGGACGATGCCAGTCCACCACCAGAGGCCCCGGCACAAGTGGACGCCAAACTCCAGTCAGCCGCCGCCGCAGCCCTAGCAGCTGCTGCAGTCAAAGCAAAACATTTAGCAGGTGTTGAGGAAAGGAAGATCAAATCACTTGTTGCTTTATTAGTTGAGACACAGATGAAGAAGTTGGAAATTAAATTGCGCCATTTCGAGGAATTGGAGGCCACTATGGAGAGGGAAAGAGAAGGTTTGGAATACCAGAGACAGCAGCTCATTCAGGAACGGCAGCAGTTCCACTTGGAACAACTGAAGGCGGCTGAGTTCCGTGCAAGGAATCACGCTTTACAAAGGATTCAAGCTGAAACAGGAGGAGTTCCTCCCGGGGTTGTTCCCGGTCCACCGGGGGGAGTCCCTGCGCCGCCCGAAGCAACAAGTGAGCCGCCACCGCAGCCTCCGCACCACGCATAA
- Protein Sequence
- MIKVFMDMKPGGSLSTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALLRAELIRSPCIFIRPEVDKTTANKVKDIIVNHQGEICEDEEDATHIIYPAVDPLEEEYARPVFRRGNNVLVHWYYFPDSHDTWAQADLPVDVPDTANWDCNRAEPWRVAATWALDLPQYNEWMNEEDYEVDVNGKKKVVHKLRLSVDDLIPGGEPSGKGKKGKRKRSPSPPPQKHGKRKSRMAKRRDNDIDEEEDNASRDNTDVAPTPDSERSTDAPPAVSTAPTTSTQSAPVEAPAPAPAPEAPATPAPAMDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNSKNKSKTPEIYLAYRNFMLDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQVEAESRPTAMGPPPTSHFHVLSDTPSGLQPLQARPTQPRPAENAAVPKVEAGLPNGTEAGPPIKTEPSVKPEPAIELGTTPGLKMDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEDPYLNDTSSSGVLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAGTHGPSAALAATGIAGTAPPPPPNATGEKKEGGVEVKTEAMEVDGEAEAKVKEEPSEAPPAEDVKEPKDDASPPPEAPAQVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARNHALQRIQAETGGVPPGVVPGPPGGVPAPPEATSEPPPQPPHHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00782588;
- 90% Identity
- iTF_00248028;
- 80% Identity
- -