Lcam006378.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905147385.1
- Location
- LR990224.1:19634834-19637131[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.37 5e+02 1.6 0.0 16 35 197 228 194 239 0.62 2 6 2e-09 2.7e-06 28.1 0.0 1 45 245 291 245 292 0.96 3 6 2.1e-07 0.00028 21.6 0.1 3 44 300 345 298 347 0.94 4 6 7.2e-12 9.7e-09 35.9 0.0 1 43 351 393 351 395 0.98 5 6 3.7e-06 0.0049 17.6 0.0 3 45 403 447 401 448 0.92 6 6 4.7 6.4e+03 -1.9 0.0 3 14 671 682 670 686 0.85
Sequence Information
- Coding Sequence
- ATGAGCGACTCTGAACTAGAATCGGAAAGCGATGACGAAGAGCAAATGAGCAGAGATTTGGAGAAGCTCAACGCAGCTTTGAATTCCGACAATGCAATCAATACACCTGAGCATCGCGAAGAGTATGAAAAACTTGATACAGCTTATAAACTTAATAGGAAGTATGACGATCAATTGCGGCAGTTTGAAAAACTTCTCCGTCTACGATTTGACCAGTGTCATAAGAGGATCAAGGAACTGGAGGAAGAAAATAACAAGAAAACTAGAGATAAAGAAAAGAGATTCCGCTATGTCATATGTGGAAGACCATATTTTAAAGACAAATCAAAGTTTCCAGCACCTGACAACGAGGATACTATATTGATACGTCAGTCACAGATGTATGACTTTTCTATTATTAAGTCGGTCACTGGTTGGAGAGATAAAGAGAAAAGTATGCTTTTGAATGTACTTCTAGAGATGTCGCGGGAGAAAAAGAAAATGGAACTCAATTCTAAGATAGCAGCAGTGAGACGTGAAAATAAAGGTCGAAAGATATCATCAACAAATGAAAATACAATTTCAACATTAAAACATGAAATTGATATGGTCGAACAAATGGGATTAAACGAATTAGCTCTACCTTTAGATGAGGAGTATGACTGGGACTTGGTTGCAAATAAAATGTCCTATAGACATGACGCCACGGAATATAAGGCCTTTTGGAAATTATATCTACATCCTACTATAAATAAAACTCCTTGGTCTACATCTGAACATACATTACTACTAAATGTTGCTTCTGATCAGAATCTACAGAATTGGAAAGAGATAGCATCTCTCTTGGGCACCGGGAGAACTAGCTTTCAATGCTTTGTATACTTTCGTACTCATGTGCGCCATCCATATGCAGGCAGAAAGTGGACGAGCGAGGAGGAAGAATATCTTAAAAGAATAGTAAAGTATTATAGGGCAGATGATTATATCCCTTGGGGTAAAGTGGCTATTGCAATGGATAACAGAACCAAGATACAAGTTTATAACAAATATTTTAGACTTATGGAGTTCAGAAAAGGTAGATTCCTAAAGGAAGAAGATGAAGTCATATTGACATACAATGATAAGTTTGGTGCAAATTTTAAAAAGATGGCAAAGTTCATTCCTGGTCGATCTTCTGCTCAATGTAGAAATCGATTTCAAATTTTAATTAAAAAAAGTGTATCAACTGTGTGGAGTACAGCTGAGGATCGAAAATTAATTAACTTTTTAAGCAATCAAACTTCATCAGTTAATTACTCAGGTATAGCTCAACATTTTCCAGACAAAGATAGGCAGCACATCCGATCTAGATGTATAACATTAAGAAAATGGATGAGATTTAATCCTAATACAGATATTGCTAAAGCTCCGAGACGTGCTTCGAGGAACTTGAACCATGGAGTTTCTTCACATGACTTAACCAGTGCCGTAGAGAAGTTGAAAATCAGAGTAGATGCTCTAGTAGATGAAATGAAAAAGAAAACCATCAATATGGATTCATCAGAAGGTGACGTAGATGAAACCATAAAAGTATTACTGTCTCAAGAGAACGATGAAGAAATAGAGGAAGCTAAATGTCATGATTTATTGTTGTCTGATGGTTCAGAGGGGGATCAACATCCTCTCCAATTTAATAAACTTAATGTACGAAATTTAAGAAAATGTCTAACTTTATGGAGAGCCTGTTTAGACAAAAACAAGTTTTTGGCATGTCCACTTACCGAAAAGTGTATAGGCTTATTAGAACCAGATCAAGATCTTCTCCCGGTAATAAAGGTTAAATCATATTCTAGGAAGAAACCAGAAACAATTCTAAAGGTTGGTTCAGCTCCTGATATTTGGGGATCAAAATGCTTACCACCTCGTACTTATGTATTTCCTCCTAACTATTCTACCATAATTGCTCTCAGAACAATGATGTCTTCTATTTCTACACAATCAGAAAAAAAAGAGGAACCACTTAACATTATAACAGCTTTCAAAAATGCTCTTCCATTTAATACAGATGAGCATGACCTTTTCAAGGAGCGCTTCAATAACTTATTTTTTTGGCCAATGCTATTAACATATCAACTACCAGAAGGTTATGAGCAAAATTTACCAAAAAAATCACGATTTGCAATTGAAGACAACAATTCTGTAGCACTACTAAAACCCAAAGCAGAAGATGAAGAAGTACACAGTGCTATAGATTTGGAGGAGTCAGCATCAACCAGCACTGCTAACTTGGATCTCGAAATGTTATTTGAAACTTCAAGTTTTGAGTCTAAGAAGTTTTAA
- Protein Sequence
- MSDSELESESDDEEQMSRDLEKLNAALNSDNAINTPEHREEYEKLDTAYKLNRKYDDQLRQFEKLLRLRFDQCHKRIKELEEENNKKTRDKEKRFRYVICGRPYFKDKSKFPAPDNEDTILIRQSQMYDFSIIKSVTGWRDKEKSMLLNVLLEMSREKKKMELNSKIAAVRRENKGRKISSTNENTISTLKHEIDMVEQMGLNELALPLDEEYDWDLVANKMSYRHDATEYKAFWKLYLHPTINKTPWSTSEHTLLLNVASDQNLQNWKEIASLLGTGRTSFQCFVYFRTHVRHPYAGRKWTSEEEEYLKRIVKYYRADDYIPWGKVAIAMDNRTKIQVYNKYFRLMEFRKGRFLKEEDEVILTYNDKFGANFKKMAKFIPGRSSAQCRNRFQILIKKSVSTVWSTAEDRKLINFLSNQTSSVNYSGIAQHFPDKDRQHIRSRCITLRKWMRFNPNTDIAKAPRRASRNLNHGVSSHDLTSAVEKLKIRVDALVDEMKKKTINMDSSEGDVDETIKVLLSQENDEEIEEAKCHDLLLSDGSEGDQHPLQFNKLNVRNLRKCLTLWRACLDKNKFLACPLTEKCIGLLEPDQDLLPVIKVKSYSRKKPETILKVGSAPDIWGSKCLPPRTYVFPPNYSTIIALRTMMSSISTQSEKKEEPLNIITAFKNALPFNTDEHDLFKERFNNLFFWPMLLTYQLPEGYEQNLPKKSRFAIEDNNSVALLKPKAEDEEVHSAIDLEESASTSTANLDLEMLFETSSFESKKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00896754; iTF_00896755;
- 90% Identity
- iTF_00896754; iTF_00896755;
- 80% Identity
- -