Lcam008134.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905147385.1
- Location
- LR990248.1:8917379-8925221[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-14 1.2e-11 44.9 0.0 1 39 70 109 70 114 0.93 2 2 2e-18 9.6e-16 57.9 0.0 1 43 280 323 280 325 0.95
Sequence Information
- Coding Sequence
- ATGTTCCCTTCCAGCAGGCTACCCGAAGACAAGGTAGCAGCACCCAGCTCGTCGCCAACAATTGCAGAGCAGCCCCTCGACCTAAGCGCCAAGTCCACCTCCAGCACCAGCGGGACTCCGCCGCCTGATAATAAAAATTTGGATAATGCTAGATTAAAACGAGCCGTCATTGAAGGCTCCAGCAACAGTGCTGCGAGAAGGGCCTACACTGAAGATGAACTGCAATCTGCTTTACGAGAAATCCAATCAGGAAGATTGGGAACCCGTAGAGCTGCCGTCCTCTACGGCATTCCTCGGTCCACGTTACGCAACAAGGTCAATAAGTTTGGCCTCACCTCGGACACTGGCCAGGAATCGGATCCGGACAGCGATCCTGATAAACCAGAATCGCCGCCCTCCGTTATCCTCAAAATACCGACTTTTCCACCACCTGACGACAAAAGTCAATCCCCAGCGACGCCAATCACTACCCCAGTTACTCCTATCACTCCTTTACTAGCACCTCAAGTTCAACCCTCACTCAATCCCCCCTCACAACTATTGCTCCCACCCTCGGTCTTTGCGGATCCACCTTCCGCTCAACATCTTTTCACGTCACTGAATGACGTTATAGCAAAAAGTATCAGCCAAAAGTTCCAACAACCCTTAGATAGACCTCAACCAACGGACCTCCCGTACATGCAAGCGCCCAATAGACACGTATCCGTAATCAAAACACCTCCGGACAACCAGAGGAACTACGCGATGCCAAGCAACTCGAAAGCCAATCCCAATAATGGGCAGCCAGCCACTGGGGGAAAAGGCACTAGGCCCAAGCGTGGGAAATATAGGAATTATGACAGGGATAGCCTAGTAGAAGCGGTCAAAGCTGTTCAACGCGGTGAGATGTCTGTCCATCGCGCGGGTTCATATTACGGCGTACCACATTCTACACTAGAGTACAAAGTAAAGGAGCGGCATCTGATGCGGCCGAGAAAACGAGAGCCCAAGCCGCAGCAGGAAGTCAAGCCTCAACCCCCAAAACCCCCACCGAAACCCCCTACGAAGTTCACGAACGGATTGAACGGTCCCGAGAGTTATCCCAACTATCCGTTCTGGCCAGGGGGCTTCGCACCGCCGGCTCCGGACTTGTACGCGTCACATATGATGAGGCGCTTACGCGAGGAAGCCCCGCCGCCGGCAAACGGCTCTTTCTTAGAGGGTATCATTCGCTCGAGCTTAGAACGGCCCGGGGCGTTAATGCAGCGGCTGAACGCACCCCCCTCTCCACCAGGCAGTGGAATGGCGGGATTAGGGGTCAGTGGGTTAAGACGACGAGGGGACCTGAGCGAGGAGCCGGCGGCGAGACGCCCACGACTCGACTCAGACCATCAGCTGGCAGCGGACATGCGCGAGGCGGTGCAGCGACTGCGCGCGGACAAGCTGCGGCCGCGGAATGGAACCCCGACGCCTCCACCCGCGTCTCCCACCCCAGCACCCCCCGGGGGCGCCTAG
- Protein Sequence
- MFPSSRLPEDKVAAPSSSPTIAEQPLDLSAKSTSSTSGTPPPDNKNLDNARLKRAVIEGSSNSAARRAYTEDELQSALREIQSGRLGTRRAAVLYGIPRSTLRNKVNKFGLTSDTGQESDPDSDPDKPESPPSVILKIPTFPPPDDKSQSPATPITTPVTPITPLLAPQVQPSLNPPSQLLLPPSVFADPPSAQHLFTSLNDVIAKSISQKFQQPLDRPQPTDLPYMQAPNRHVSVIKTPPDNQRNYAMPSNSKANPNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPPKPPTKFTNGLNGPESYPNYPFWPGGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGALMQRLNAPPSPPGSGMAGLGVSGLRRRGDLSEEPAARRPRLDSDHQLAADMREAVQRLRADKLRPRNGTPTPPPASPTPAPPGGA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- iTF_00621146;
- 80% Identity
- -