Lcam006575.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Limenitis camilla
Gene Symbol
ct
Assembly
GCA_905147385.1
Location
LR990244.1:503062-506698[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-32 2.9e-28 98.4 0.0 4 77 334 408 332 410 0.96
2 2 5.5e-31 5.4e-27 94.3 0.0 3 75 532 605 530 609 0.95

Sequence Information

Coding Sequence
ATGGCGGCTTTAGGATTACCGGAGGAGAATTTAGAGATTCTTACGCACTTTAATGGCCCACCTCATTTCAATTTTGGGACTAAAGATGGAACTGCTGGTCCAGGATTTGGTAGATCAGAAGGTGAAGGTGATGAACGTATCGCGCACATGCTCAACGAAGCTCACATGATGAAGACTCCGACCCAGGTCACGAATGATGATTCAAGGAGTAATGAAGATTCTAGTTCACCGAGGACGCAGTGTCCGTCGCCATTTTCTAATAAGGACTCGAGTCAAAATAGAAGGCTGAAAAAATACGAAAACGATGACATTCCCCAAGAGAAGGTAGTCCGCATTTACCAGGAGGAGCTTGCCAAGATCATGACCAGGCGGGTGGAGGACATGCGCCACAACAGAGACGGCTTCCCTGGAATGTTTCCTCCATTTTTCAGTGGCGGAATGCCTCACATGGAGCGCCCTCCAGAAGACATCCGAATGGCCCTAGAAGCCTATCACCGGGAGCTCGCCAAAATACCTCCAGGAAACATCCCCAATCTTCACAACCTACCTGGAATGCCCTTCCCTAACATTCTTGCCCTACAACAACAAGCAATGCAAAATCAACATATAAATGGTGGAGCTGTCCAGGATTTATCCCTACCTAAGGACAAGAACTCCAAAATAAACGGCCTAACTGATGATAAAGATAGATCTATGGATGCAGAAGAAGCCATCAGACACGCTGGAAGTGCATTTTCTCTGGTTCGACCCAAATTAGAACCAGGACAATCAACCGGATCATCAGCGTCGAGTCCCTTAGGGAACGCAATTCTACCCCCAGCAATAACCCCCAATGAAGACTTCAGTAACTCCGCCGCTGCTAGTCCCTTACAACGAATGGCTTCGATTACAAATAGTCTCATCTCGCAACCTCCCAATCCTCCTCATCACGCTCCACCCCAAAGATCCATGAAGGCTGTCCTTCCTCCAATAACTCAGCAACAATTTGATCTATTCAATAATCTTAACACGGAAGATATCGTCAAAAGGGTTAAAGAAGCCTTAAGTCAGTACTCCATCAGTCAGAGATTATTTGGAGAGTCTGTCCTTGGCCTATCCCAGGGATCCGTTAGTGATTTGCTCGCAAGGCCAAAACCATGGCATATGCTGACTCAGAAAGGACGAGAACCCTTTATAAGGATGAAGATGTTCTTGGAGGATGAAAATGCTGTACACAAGCTAGTGGCATCGCAGTACAAGATAGCTCCAGAGAAGCTGATGAGGACTGGGAACTATAGCGGAGCACCTCCCTGTCCGCCAAATATGAACAAACCGATGCCACCAACACAGAAGATGATCTCCGACGCGACTTCCCTCCTCACAAAGATGCAGCAAGAACAGCTCCTCGGCCAGGCTCACCTTGGACACCTACCTCCTACCCCTCTCCTTCTGACTCCTCCCGGATTCCCCCCTCATCACGCGGTCACACTACCTCCCCAGCACCATGACAACAACAAGGAGAGAAAACCACCCCCACAACCCCACCACCAGCCGGTTATGAGAGGACTCCATCAGCATATGTCGCCAAGTGTTTACGAAATGGCTGCCTTAACTCAAGACTTAGATACGCAGACAATCACGACAAAGATAAAGGAAGCGTTATTAGCCAATAATATAGGACAAAAGATCTTTGGAGAAGCCGTCCTAGGTCTGTCACAGGGATCCGTCAGCGAGCTGTTATCGAAACCGAAGCCCTGGCATATGCTAAGCATCAAAGGCCGGGAACCCTTCATTAGAATGCAGCTCTGGCTGAGCGACGCGCACAACATCGACCGCTTGCAAGCTTTGAAAAATGAGCGACGAGAAGCAAACAAGCGACGGAGATCCAGTGGACCCGGGCAGGACAATTCCTCTGACACGTCATCAAATGACACGTCGGAATTTTATCACTCGAGTTCCCCCGGACCAACCTCAGGAGCACCCTCGGCAAAGAAACAAAGAGTTCTATTCTCCGAGGAACAGAAGGAAGCGCTGAGGCTGGCGTTTGCGCTAGATCCTTACCCAAATATGCCGACAATCGAATTTCTTGCCGCCGAACTTGGACTTTCAACTAGAACTATCACAAATTGGTTCCACAATCACCGAATGCGGCTAAAACAGCAAGCCCCTCACGGGCTACCAGCGGAGCCTCCGGCGCGAGACCAGAACTCCGCTCCCTTCGACCCTGTTCAATTCAGGCTTTTGCTAAACCAGAGACTTCTGGAATTGCAGAAAGAGAGAATGGGGCTCTCCGGAGTCCCTCTCCCCTACCCTCCATACTTCGCAGCGAACTCAAATTTTGCGGCTCTTATTGGGCGAGGTTTGCTTCCTCCCGACGAAGCTAAGGATCCGTCGGGGGGTCTGGACCTCTCGATGCCGTTAAAACGTGAGCCCGACGGTGATGATTTTGAAGACGACGACGTGGAGAGCAACCTCGGCTCCGAGGACTCTGATGAGGAGAAGACTGAGCCGAAAGCGGCGTCGACCCCGGCAGGGCGCTCCAGACGGAAGCCCGCGGCGCCGCAGTGGGTGAACCCCGATTGGCAGGACGAGAAGCCGCGGAACCCCGACGAGGTGATAATCAATGGGGTCTGCGTGATGAGGAGCGATGACTTCAGGCGGGAAGCCGAGGAGACGGTCCGCGTTGAACCTTCCCCGGTCCCCCGCGAAGTTTCCCCGACCTCTCGAGAGACCTCCCCGGCCTCGAGCCACGCGCACACGCAGTCCCACACGCACGCGCACGCGCTCGTGCCGCCCGACGTGCTGTCCGAGGACAAGATCAAGACGGAGGCGGAGGACGACCGGTGGGAGTACTGA
Protein Sequence
MAALGLPEENLEILTHFNGPPHFNFGTKDGTAGPGFGRSEGEGDERIAHMLNEAHMMKTPTQVTNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHNRDGFPGMFPPFFSGGMPHMERPPEDIRMALEAYHRELAKIPPGNIPNLHNLPGMPFPNILALQQQAMQNQHINGGAVQDLSLPKDKNSKINGLTDDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPPNPPHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLTKMQQEQLLGQAHLGHLPPTPLLLTPPGFPPHHAVTLPPQHHDNNKERKPPPQPHHQPVMRGLHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQNSAPFDPVQFRLLLNQRLLELQKERMGLSGVPLPYPPYFAANSNFAALIGRGLLPPDEAKDPSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSDEEKTEPKAASTPAGRSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPREVSPTSRETSPASSHAHTQSHTHAHALVPPDVLSEDKIKTEAEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00947788;
90% Identity
iTF_00642229;
80% Identity
iTF_00896661;