Lcam006082.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- Jarid2
- Assembly
- GCA_905147385.1
- Location
- LR990224.1:14545818-14559279[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-13 6.9e-10 39.9 0.0 13 89 1087 1159 1075 1159 0.85 2 2 2.6 9.6e+03 -2.2 0.0 23 35 1572 1584 1555 1585 0.77
Sequence Information
- Coding Sequence
- ATGTCGATGTTTGCGACGTTACTAATATTCAAATATGTTATGCGCCTTCGGAAAGTCCAGGCGCAAAGGAAGTTCGCCCAAGGTGTATATATGCCAACAAATTCAAATATAAATACGGTTGTTGATAGAAGAACTGATGTTGGTACTGAAAAAGATCCTAAAAATGTATTCCACAACAATACTTCGGCAAAAACATTATTGGACATAGTTTCATTCGAAAGCTTTCATACTCATACACCCATAGTTCTAATAGAGAGATTATGCGAAGCTAATTTGAGATTGGCCGATGATTCTGAATCAATAAACAGCAATAATAACTTACTACAGCCTGTTGTTAAAAAAACTAAGCCAAAATTCAATTCAAGGACATTGAAGAATTCTGAAACCATGATTTTGCGATCGAGAACTCAAATTGCTAAAAGATGGAATGTGGATGAAGTTTCATATTCTCCCAAAAAAAAGGTACGACGAACGAGGCAACGTATTGTCGAAGAATATCAATCAGAGGACGAAACACCTTTAAAATTCTTCGCTAGATCCAGAACTTCCAAAGAGATGACTCCATCAGGCAACGAGGGCACAACATCAAAACAACATAAAAATGATGACATACCTTTAAGATTCTTAGCTAGGCCGAGAACCTCTAAAGAGGTGACTCCATCAGGCAACAAGGGCGCAACAACACAACAACATACAAATGATGACATACCTTTAAGAATCTTAGCTAGGCCGAGTACCTCCAAAGAAGTGACTCCATCGGACAACAAGGGCGCAACAACAAAACAACATAAAAATGATGACATATCTTCAAGATTCTTAGCTAGGCCGAGTACCTCCAAAGAGGTGACTCCATCAGGCAACAATTGCGCAACAACAAAACAACATAAAAATTATGACATACCTTCAAGATTCTTATCTAGGCCGAGTACCTCCAAAGAGGTGACTCCATCAGGCAACAAGGGCGCAACAACAAAACAACATACAAATGATGACATACCTTCAAGATTCTTAGCTAGACTGAGTACCTCCAAAGAGGTGGCCTCATCAGGCAACAAGGGCGCAACAACAAAACAACATACAAATGATGACATACCTTTAAGATTCTTATCTCAGGCGAGTACCTCCAATAGACCTATGTTAGAATTTCCGCCAGACGTCAGAGGCCTAGGAAGTGTTTCTGACGTGGAGTATAAATATGATGAGACCGAGTGCCAAATAGATGATGATGAGTATGGATTTCCGGACAACTTCATGGAGTGCAGTCTGATAAATGACAATTATACCATGACTGTCATCAATTCTTGCGCGTATTTAACAAGTAATACCATTGAAATGTGTAACCCTGACGTTGAGGAGGCTAGCAGTGCTAGCTCAGATGTAATTCAAATTATTGAAGACCCAGTCCTTAGTGATGACGTGGAGGATAACATGGAAAGCGCGTCTTTAACAAGTAATACCATTGAAATGCCTAACCCTGAGGTTAAGGAGGCTAACAATGCTAGCACAGATGTAATTCAAATTATTGAAGACCCCGGCCTTAGTGATGACATGAAGGATAACATGGAAAGCGCGTCTTTAACAAGTAATACCATTGAAATGCCTAACCCTGTGGTTGATAAGGCTAACAATGCTAGCACAGATGTAATTCAAATTATTGAAGACCCTGGCCTTAGTGATGACATGAAGGATAACATGGAAAGCGCGTCTTTAACACGTAATACCATTGAAATGTCTAACCCTGTGGTTGATAAGGCTAACAATTCTAGCACAGATGTAATTCAAAGTATCGAAGACCCTGGTCTTAGTGACAACATGAAGGATAATATGGAAAGCGCGTCTTTAACAAGTAATACCATTGAAATGCCTAACCCTGTGGTTGATAAGGCTAACAATGCTAGCACAGATGTAATTCAAAGTATCGAAGACCCTGGCCTTAGTGATGACATGAGGAATAACATGGAAAGCGCGTCTTTAACAAGTAATACCATTGAAATGCCTAACCCTGAGGTTAAGGAGGCTAACAATGCTAGCACAGATGTAATTCAAAGTATCGAAGAGCCTGGCCGTATTGAAAACAGTGTAATTGAAAATAGTACAAGTAATGTTGTACAAATTGGTCCCAGTAGTAATAATAATGATAACATGGAGGATAACATGGAAACGGAGAGTTTATATAGTGAAGTGGAAGGTGCAGGCAGTGAGCTGGAGAGTGTATATAGTGAAAAAGATTCAGAAACTATTCAATTCATCGAGGAGTCAATGGATGTTAGTGAAGGGTCAATGGATGTTAGTGAAGAAGAGGAAGCTGAAGGTTCGGATGATCATATATTTAATGAAATCACACAGTGGTCAGGTGTGACACATAGTGAACATAGCATATCAGAGCCTAATGTGTCGGGTAATAATACTGAGAACGAAGGAATAAACCAAAAGCGAAATAAAGTTTGTAAGGCCATCTCAACGAAGAATTTGTGCAAAATGATAACAAGATGCAGCGATGTAAATGAATTTGTTGCTGATCTAAAAGAACAGTTTAAAAATAGATGCTGTAAATGCATAAATTGCAAAACTATTTACCGATCTCACAAAATAATGTTAATATTAAAAGGCCACGAAGAGAAATATCATCGTGATCAGTTATGTCGATTGGCCTGTATGCGTGAAAATAAAGAAGGAGCACATTCAATAGATCTCACTGATCCAAACAGTAATGCCGAAACACAAAGAAGTGGGTGTAACGTACTGACTATTATAAAACAAGATTTGCTCGGTGATAGCGAAAACACTACAGCTTTTAATAAAATAAAAATTCTTACGCGAAATATAATATTAGAAAAGGAAAAAGCTCAAAGAAGTATTAGTCCTATTTCTGATAACTGTGACTCGGACGCCTCATCAGATGCCCCAATAATGATAGGGAGGCTTGGACATTCAAGAAATGTAAACGGCGGTCAAGGAATTCTTGATCCGCAGCCTGGACCTTCTGGATCTGCAGCAGCTATAATTCGTTCTAAGTTAGTTGATGCTCCTGTATTTCGGCCTACCAAAGAAGAATTTCAAGATCCGGTGGCATATTTTGAGAAGATCATGCCATTTGGTGCTAAGTATGGGTTGTGCAAAGTGATTCCTCCTACTGACTTTCAACCAGCCTGCAACTTGAATGATAACATGCGATTCACCGTAACCAATCAATACATAGACCGTGTATATAATCGTTGGGGAGAACATATTCGAGCATTATTCGCTATGCGCGTTTGCGCAACTAGACAAAAAATACCATTTGTTAAGCCACCTTTGGTAGGAGGACTAGAATTGGATCTGGTTAAAATGTTTAAGGCAATGCAAAGGGAAGGAGGTATAAAAACGTTCGATAAAAAGGCGTGGCAGAAAATTGCCGTGGATTGCCATTGTTTATCTATTTCTAATCCAGATAAAGTACTTGATGGCTTTTATCTGAAGTATTTGTTGCCATACGACACCTTCTCTAAGAGGGCCCGCCAGGAATGTCTAAATGAATTGGAAGTATGGTGGCGTAAGAAGAACCAGAAAATGCTTGAACGGGCGATGAATCCCTTACACCGACAAAAGCGCTTACTTGCTGAAACTGATTCCTCAAGTGATGAGGAGATTGACGACCACCCGGACCCGGACGTGCACTCGATCTTAAAGGAAGTTGAGGATTGCGTGATTAAAGGCCGTATCATGAGTCTCGGCAACTACAAAAAGACTGCACGAAATGCCAGTAGGATATATGCTCCAAAGGGTGGTTCTGCTGCAGAAATAGAAAAATCATATTGGAATATTGTAGAAAATGGTAATATGCATGTTTGCGTTAACTCCGCTTCCATTGACACCGGCTCGGAGGGTTACGGGTTTACCAAAAACAAACACGAGCCATTTGGATCCCATCCATGGAATCTAAAAGTTCTCAGTCAGAACAAAGGCAACGTTCTGCGTCTCCTTGGCTCCGTGATCGGGCTGACTGTGCCCACCCTGCACGTCGATATGCTGTACTCGACCAGCTGCTGGCATCGCGATCCACATGGCTTACCTTGGGTTCAGTACATGCACGAGGGCGCTCAAAAGATTTGGTATGCTATATCAGATGAAGAAAGTTACCGTTTCCGAAAGGCAGTGGAGAATCTTAGTCCGATGTCATGTCAGAACAAATCAATATGGCTTCCTTCTGACATTACAATGATTCCGCCCAAGTTGCTTTTGGAACATGGCGTGTCTTTATCTAAAGTAGTTCAAAATCCTGGGGAATTTATAATTGTATTCCCAAAATCTTACTCTTGCTCAATTAGCACAGGATACATTGTTTCGGAGAGTGTATACTTTGCTACAAATTCCTGGGTGAACAGTATTCACCAAGTGTTCCAGGAGCTGCGTGACAGCTGCGAGCCCACTATGTTTTCGCTGGAGCATCTGCTGTTCTCCGCGGCCAGGGACTTGCGCGCGTCATCCACGATGCTGCAGCTGGTATGCACCAAGCTCATCTCCTTGGTCAACGACGAGCTTGATAACCGCAACAAGGCCAGGCTCAAGAATCTTGTGCCTGTCTTTATTGGACCTCGAAATAATACAACTTGGAGTGCACTTCCCGATGATGAATGTCAAATCTGTCGGACGACTCTTTATCTTTCTCGGGTAAAAGGAGTCTTCCAAAAGAGTTTAGCGGTCTGCATAACGCATGCCCTACGGGTCCTTGACGACCCTAACATCACCAAGCGTGATATCGATCTGTACCAGTATGAGATCTTCTTCACCAACATAGAACTTGAAGATATAATAAACATTGCCAAAAAACGCCTTATCAGTATCAAACCGAGACGGAATTACAATGTTCATCAAAGTTCAAATATCTGA
- Protein Sequence
- MSMFATLLIFKYVMRLRKVQAQRKFAQGVYMPTNSNINTVVDRRTDVGTEKDPKNVFHNNTSAKTLLDIVSFESFHTHTPIVLIERLCEANLRLADDSESINSNNNLLQPVVKKTKPKFNSRTLKNSETMILRSRTQIAKRWNVDEVSYSPKKKVRRTRQRIVEEYQSEDETPLKFFARSRTSKEMTPSGNEGTTSKQHKNDDIPLRFLARPRTSKEVTPSGNKGATTQQHTNDDIPLRILARPSTSKEVTPSDNKGATTKQHKNDDISSRFLARPSTSKEVTPSGNNCATTKQHKNYDIPSRFLSRPSTSKEVTPSGNKGATTKQHTNDDIPSRFLARLSTSKEVASSGNKGATTKQHTNDDIPLRFLSQASTSNRPMLEFPPDVRGLGSVSDVEYKYDETECQIDDDEYGFPDNFMECSLINDNYTMTVINSCAYLTSNTIEMCNPDVEEASSASSDVIQIIEDPVLSDDVEDNMESASLTSNTIEMPNPEVKEANNASTDVIQIIEDPGLSDDMKDNMESASLTSNTIEMPNPVVDKANNASTDVIQIIEDPGLSDDMKDNMESASLTRNTIEMSNPVVDKANNSSTDVIQSIEDPGLSDNMKDNMESASLTSNTIEMPNPVVDKANNASTDVIQSIEDPGLSDDMRNNMESASLTSNTIEMPNPEVKEANNASTDVIQSIEEPGRIENSVIENSTSNVVQIGPSSNNNDNMEDNMETESLYSEVEGAGSELESVYSEKDSETIQFIEESMDVSEGSMDVSEEEEAEGSDDHIFNEITQWSGVTHSEHSISEPNVSGNNTENEGINQKRNKVCKAISTKNLCKMITRCSDVNEFVADLKEQFKNRCCKCINCKTIYRSHKIMLILKGHEEKYHRDQLCRLACMRENKEGAHSIDLTDPNSNAETQRSGCNVLTIIKQDLLGDSENTTAFNKIKILTRNIILEKEKAQRSISPISDNCDSDASSDAPIMIGRLGHSRNVNGGQGILDPQPGPSGSAAAIIRSKLVDAPVFRPTKEEFQDPVAYFEKIMPFGAKYGLCKVIPPTDFQPACNLNDNMRFTVTNQYIDRVYNRWGEHIRALFAMRVCATRQKIPFVKPPLVGGLELDLVKMFKAMQREGGIKTFDKKAWQKIAVDCHCLSISNPDKVLDGFYLKYLLPYDTFSKRARQECLNELEVWWRKKNQKMLERAMNPLHRQKRLLAETDSSSDEEIDDHPDPDVHSILKEVEDCVIKGRIMSLGNYKKTARNASRIYAPKGGSAAEIEKSYWNIVENGNMHVCVNSASIDTGSEGYGFTKNKHEPFGSHPWNLKVLSQNKGNVLRLLGSVIGLTVPTLHVDMLYSTSCWHRDPHGLPWVQYMHEGAQKIWYAISDEESYRFRKAVENLSPMSCQNKSIWLPSDITMIPPKLLLEHGVSLSKVVQNPGEFIIVFPKSYSCSISTGYIVSESVYFATNSWVNSIHQVFQELRDSCEPTMFSLEHLLFSAARDLRASSTMLQLVCTKLISLVNDELDNRNKARLKNLVPVFIGPRNNTTWSALPDDECQICRTTLYLSRVKGVFQKSLAVCITHALRVLDDPNITKRDIDLYQYEIFFTNIELEDIINIAKKRLISIKPRRNYNVHQSSNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -