Lcam002021.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- lz
- Assembly
- GCA_905147385.1
- Location
- LR990241.1:9330048-9350261[+]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.15 1.1e+03 -0.1 0.0 75 104 11 40 5 48 0.74 2 2 5.9e-70 4.4e-66 221.0 0.1 13 129 57 173 50 173 0.98
Sequence Information
- Coding Sequence
- ATGGCGTGGTGTTACGCCTCCGTTATCGAGAAGCACGTGAGTAATGCATTTTATATTTTAATATTCGGTAGCAAGAGCGGTGGAGGTAAAAATTTGTGCATAGGAGAAGACGTCTTTAGCCTCGTCGTCGTCTTGAAGCTGCTCCCGGGTCTCAAGCAGGTACTGCAAGTACGGACCGGCAGTCCAGACCTTATGTGCTCAATGCTGCCACAGCACTGGAGGTCTAACAAGACACTACCCGGTGGATTTAAGGTGGTAGCTCTTGGAGACGTGCTTGATGGCACTCAGGTCACCGTGAGAGCTGGGAACGATGAGAACTGCTCCGCTGAACTGAGGAATAATACTGCTGTGATGAAGAACAGGGTGGCCAAGTTTAATGACCTTCGATTTGTCGGCAGGAGTGGAAGAGGTAAAAGTTTTTCGTTGACGATAACAATATCAACAACACCACCTCAAGTAGCAACATACCAAAAAGCAATCAAAGTGACCGTCGATGGACCTCGAGAGCCTCGGTCGAAAACTAGTACAAATGCATCCCCACACCAAATAAGAACGATTGGGTTCCAGCGACCGTTCATATCGTCTACCTCTATGGCGTTAAGAGATATGGAGTATAAGTCATCCACGACGAGACTACGGTCCTTGTCACATGAAGAACGGGAGTACAAGACTAATGCCAACTTGCCTATTGAAGGTGTAAATGTTAGTTCTGAATGTTCACTGTGGCTCTCCAAAAAGGAAGCACCTCTAAGCTATTGTTGGTAG
- Protein Sequence
- MAWCYASVIEKHVSNAFYILIFGSKSGGGKNLCIGEDVFSLVVVLKLLPGLKQVLQVRTGSPDLMCSMLPQHWRSNKTLPGGFKVVALGDVLDGTQVTVRAGNDENCSAELRNNTAVMKNRVAKFNDLRFVGRSGRGKSFSLTITISTTPPQVATYQKAIKVTVDGPREPRSKTSTNASPHQIRTIGFQRPFISSTSMALRDMEYKSSTTRLRSLSHEEREYKTNANLPIEGVNVSSECSLWLSKKEAPLSYCW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -