Ladu010177.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- nfxl1
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000268.1:286950-289424[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 2.4e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 18 0.0059 1.4e+02 3.0 0.5 4 10 170 176 169 177 0.97 3 18 1.6e-07 0.0037 17.6 15.9 3 19 187 203 186 203 0.95 4 18 2.3e-08 0.00055 20.3 10.8 3 19 240 256 238 256 0.91 5 18 1 2.4e+04 -4.4 1.7 6 10 281 285 280 285 0.83 6 18 7e-10 1.7e-05 25.1 13.3 1 19 291 309 291 309 0.99 7 18 1.6e-07 0.0038 17.6 18.0 4 19 347 362 345 362 0.93 8 18 1 2.4e+04 -5.3 2.2 5 10 385 390 385 390 0.88 9 18 4.2e-06 0.1 13.1 18.7 1 18 396 413 396 414 0.97 10 18 4e-09 9.6e-05 22.7 16.9 1 19 423 441 423 441 0.99 11 18 0.0001 2.4 8.6 6.4 9 19 489 499 487 499 0.89 12 18 0.036 8.6e+02 0.5 7.1 3 12 510 519 509 519 0.91 13 18 0.2 4.8e+03 -1.9 3.4 14 18 548 552 548 553 0.85 14 18 0.047 1.1e+03 0.1 0.4 7 12 568 573 568 580 0.84 15 18 2.3e-06 0.055 13.9 5.4 1 11 589 599 589 600 0.96 16 18 0.85 2e+04 -3.9 1.7 15 18 614 617 614 618 0.87 17 18 0.00018 4.4 7.8 13.9 4 18 631 646 629 647 0.88 18 18 1.2e-06 0.03 14.8 12.9 1 18 688 706 688 707 0.89
Sequence Information
- Coding Sequence
- ATGGCAAGACGGTACCGGGACGCTGCAGCGAAATTACAGCAAAATGTCCAGAAGCACTTGAAAGACATGAAGGAACATTTATCTTCATCCGAAGATGAAGAGGCCTACGAGCCCAGCGTCCTGGAGGGAGTGTTCCAGAGCTACTGGCGAGGTGGAGGAGACACCAGCATGCTGAATAGGACTAAAAATCTTCTAGAAGAAGCTCTTAGTGGCCGCTCTGTTACATGTCTCATATGCATCGCTTCCATCAAACGAAACCATGCTATCTGGACCTGTGACCATTGTTATTCTTACTTTCACCTTTCTTGCATACAGAAATGGGCGAAGGACAGCATAAGCTTACGTACAGTAGAGAATGAAGGCCCAATTACAGTGTTCGTGCCGAAAAAAGTCGAATGGTGCTGTCCTAAATGCCGTCAGGCGTATAGCAAGGAGCAAATACCTCGTAAATATAGGTGTTTCTGTGGAAAAACTGACGATCCACCTCAGCACCCATGGCAAATTCCTCACACATGTGGTGAAGTCTGTGCGAAGAGGTTATCTACTGGAGATAATTGTAAGCATAAATGCCTACTCCTATGCCACCCTGGACCCTGCCCACCATGCCCACAGACTGTTAATGGGATTTGCTTCTGCCAAAAGGAACAAAAGAAAGTTAGATGCAGTTCTGCTAAGTGGTCCTGTGGTCAGCAATGCAAGAAAACACTCCTCTGTCAGGCTCATAAGTGTGAAAACATTTGCCACGAAGGGGACTGTCTCCCCTGTAGCTACACCAGCATACAGCCTTGTCAATGTGGTCATGAAAAATCTAAAAGACCATGTAGCAACCCATTTTGGCAATGTACAAAACCATGTAACAAACCATTTTCTTGCGGCTATCATAAGTGTGAGAAGATCTGTCATTCTGGCAGTTGTGGCACCTGCCCCTATTCAGGCATGAGATCCTGCCCCTGTGGAGCTAACCAGCGGTATGTACAATGTCCTGACATCATGGAGACATGTCTCGGAACCTGCAGCAGGAAACATGATGATTGTGATCATACCTGTCCGGAAAAATGTCACAAAGGCCCTTGCCCACCTTGCCAAGTTCTTATCCAGAAGAAATGTCTATGCTCAACACATACTAGATCCCTACCTTGTAGCAAAGAATTCAAGTGCGAAACTAAGTGTAGAGGGACCAGACCTTGTGGAAAACATGGGTGTGCTAAAAAATGCTGCAATGGAAACTGCCCTCCTTGTGAGAAAACATGTGACAAGCCTCTCCAATGCGGACGACATAAATGCACCAACATCTGCCACCATGGCCCGTGCTACCCATGTCCTTTAGAATCTAAAATAACCTGCAGATGTAAAGAAACATATGTTACAGTCCCATGTGGAAGAGAAAAGTTTGTAAAGCCACCAAAATGTACAATACCATGCAAAGTCAAATATAAATGTGGACATTCTGAAGAAAATAAGCATTCCTGTCATTTTGGAGACTGCCCACCCTGCAAAGCTATTTGCAAAAAGGCTTATCCAAACTGCAACCATGAATGTGTAGCTACATGTCATGAATATGTGGCTGTGGTTTTCAAGCAAGTTGAAAAACCAGCAACTCCATGGGAAGTGCAGCCGCCAAAAACTAAAATCATGACACTAGAATGTCCTCCGTGTGATGTTCCTGTCCCTATCATATGCTTTGGAGAACATGAAACAGAACAACAACTGTGCCATTCTGCATCTAGAAGACCATGTGGTAGAGAATGTGGAAAACCGCTTGCTTGTGGTAACCATACTTGTACCCTACTCTGTCATGTTTTCGCTCCTGATCCTCAGCATCCGAATGTGCCTTATGTATGTAAACCATGTGACAAAGGTTGTGAAAAACCCCGTCCAGTAAAATGTGTGCATAAATGTGCAAAAGGAGCATGCCATCCTGGTGCATGCCCTCCTTGTGAAGTGTATGAACGACTTGCCTGCCACTGTGGCACTACAGAAATGTATCTACGCTGCCGTGAGCTGAGCACGGCCACTGAAGAGAAGCTCTCTTGCAAGCAGCAATGCCCAAAGAACTTAGAATGTGGTCACCGTTGTAGAAACACTTGCCATTCTGGACCATGTGCTGAACAGACTTGCACCAAGAAAACTAAGATACATTGCCAATGCGGTAATTTGAAGAAAGAAGCACCATGCAATGCTGTACGAAACGGAGAAGTAAAAGTTGTTTGTGATGAATCTTGTGAAACCAAGAAGATTGCTGCTAAAATAGAGCAAGAAAAAGAGCAACAGAGACTGAAGCAGTTAGAAGAAGAGAGAAATAAAAAAGAGCTTGCTGAATATGAATGGAAACTGAGTGGAAAAAAGAAGAAGTATAAGGAAAAGAAGGTAGTTGTCAACAAAGATGACAGAAACTGTTTGCAGAAATATTGGATACCTATTTTATCTGTGCTAGTTTTAATAGTAGCAGCTTTTTATTATTTATTTGAATTGTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKDMKEHLSSSEDEEAYEPSVLEGVFQSYWRGGGDTSMLNRTKNLLEEALSGRSVTCLICIASIKRNHAIWTCDHCYSYFHLSCIQKWAKDSISLRTVENEGPITVFVPKKVEWCCPKCRQAYSKEQIPRKYRCFCGKTDDPPQHPWQIPHTCGEVCAKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICFCQKEQKKVRCSSAKWSCGQQCKKTLLCQAHKCENICHEGDCLPCSYTSIQPCQCGHEKSKRPCSNPFWQCTKPCNKPFSCGYHKCEKICHSGSCGTCPYSGMRSCPCGANQRYVQCPDIMETCLGTCSRKHDDCDHTCPEKCHKGPCPPCQVLIQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCAKKCCNGNCPPCEKTCDKPLQCGRHKCTNICHHGPCYPCPLESKITCRCKETYVTVPCGREKFVKPPKCTIPCKVKYKCGHSEENKHSCHFGDCPPCKAICKKAYPNCNHECVATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCDVPVPIICFGEHETEQQLCHSASRRPCGRECGKPLACGNHTCTLLCHVFAPDPQHPNVPYVCKPCDKGCEKPRPVKCVHKCAKGACHPGACPPCEVYERLACHCGTTEMYLRCRELSTATEEKLSCKQQCPKNLECGHRCRNTCHSGPCAEQTCTKKTKIHCQCGNLKKEAPCNAVRNGEVKVVCDESCETKKIAAKIEQEKEQQRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVVVNKDDRNCLQKYWIPILSVLVLIVAAFYYLFEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -