Ladu008144.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- grn
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000206.1:497969-501929[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.38 1e+03 -0.2 0.0 4 19 9 23 7 25 0.78 2 3 0.36 9.6e+02 -0.1 0.1 11 23 29 41 27 43 0.62 3 3 4.6e-20 1.2e-16 60.4 6.8 1 35 64 97 64 98 0.97
Sequence Information
- Coding Sequence
- ATGGGGATAAGAGGAAAATTTGAGTGCGGAGACGGGTTCAGTAAATGGATTGCCTCCCCCTCGGGGGCTCTCATAGTGGGATCTAGATGGCGTAGATATACGGCGATAGGCGGGCGAGTGTGCGGCGCTGCCGATGGGACCGCGCGTGTGTGGTCGCTTCAGAGCGCGGCGCGTCGTGCTGGGACCTCTTGTGCTAACTGCAAGACCACCACGACAACACTTTGGCGACGGAACCAGAACGGCGAGCCAGTCTGCAACGCGTGTGGACTATACTACAAGCTGCATAATGTGAGTACTTTATACAAATTTGAATTCGCTTAG
- Protein Sequence
- MGIRGKFECGDGFSKWIASPSGALIVGSRWRRYTAIGGRVCGAADGTARVWSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVSTLYKFEFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -