Basic Information

Insect: Ligdia adustata
Gene Symbol: -
Assembly: GCA_947049285.1
Location: CAMRIN010000089.1:1939694-1951581[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0029 0.21 12.5 1.1 2 23 204 226 203 226 0.96

2 29 0.0017 0.12 13.2 0.6 2 20 286 304 285 306 0.93

3 29 6.7e-05 0.0047 17.7 0.4 2 23 343 365 343 365 0.97

4 29 2.5 1.8e+02 3.3 0.3 2 13 396 407 395 416 0.82

5 29 0.00039 0.028 15.3 0.3 1 23 426 449 426 449 0.96

6 29 0.96 68 4.6 0.1 1 23 467 489 467 489 0.94

7 29 0.0015 0.11 13.4 2.3 2 23 527 548 526 548 0.96

8 29 0.00059 0.042 14.7 3.5 2 23 591 613 590 613 0.97

9 29 6.1e-06 0.00043 21.0 1.3 1 23 663 686 663 686 0.97

10 29 0.00051 0.036 14.9 0.1 1 23 743 765 743 765 0.97

11 29 0.027 1.9 9.5 8.8 1 23 776 798 776 798 0.97

12 29 0.038 2.7 9.0 1.8 2 23 810 831 809 831 0.96

13 29 0.0043 0.31 12.0 0.9 1 23 841 863 841 863 0.98

14 29 0.3 22 6.2 3.6 2 23 890 911 889 911 0.95

15 29 0.0018 0.13 13.2 3.7 1 23 922 944 922 944 0.97

16 29 2.2e-05 0.0015 19.2 0.4 1 23 952 974 952 974 0.98

17 29 0.0002 0.014 16.2 0.6 2 23 994 1016 993 1016 0.97

18 29 0.055 3.9 8.5 0.2 1 23 1034 1056 1034 1056 0.94

19 29 0.35 25 6.0 3.0 1 23 1063 1085 1063 1085 0.96

20 29 0.007 0.5 11.3 0.6 2 23 1096 1118 1095 1118 0.95

21 29 0.011 0.8 10.7 0.2 1 23 1140 1162 1140 1162 0.97

22 29 0.024 1.7 9.6 0.2 2 23 1243 1264 1242 1264 0.94

23 29 0.29 21 6.2 2.8 5 23 1274 1292 1272 1292 0.94

24 29 0.0036 0.26 12.2 1.8 2 23 1303 1325 1302 1325 0.95

25 29 0.0047 0.33 11.9 1.0 2 23 1342 1360 1342 1360 0.96

26 29 1.7 1.2e+02 3.8 2.3 2 20 1364 1382 1363 1384 0.92

27 29 0.27 19 6.3 2.2 2 23 1433 1454 1432 1454 0.94

28 29 0.0058 0.41 11.6 0.9 2 23 1465 1487 1464 1487 0.96

29 29 0.67 47 5.1 2.7 2 20 1525 1543 1525 1545 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0029	0.21	12.5	1.1	2	23	204	226	203	226	0.96
2	29	0.0017	0.12	13.2	0.6	2	20	286	304	285	306	0.93
3	29	6.7e-05	0.0047	17.7	0.4	2	23	343	365	343	365	0.97
4	29	2.5	1.8e+02	3.3	0.3	2	13	396	407	395	416	0.82
5	29	0.00039	0.028	15.3	0.3	1	23	426	449	426	449	0.96
6	29	0.96	68	4.6	0.1	1	23	467	489	467	489	0.94
7	29	0.0015	0.11	13.4	2.3	2	23	527	548	526	548	0.96
8	29	0.00059	0.042	14.7	3.5	2	23	591	613	590	613	0.97
9	29	6.1e-06	0.00043	21.0	1.3	1	23	663	686	663	686	0.97
10	29	0.00051	0.036	14.9	0.1	1	23	743	765	743	765	0.97
11	29	0.027	1.9	9.5	8.8	1	23	776	798	776	798	0.97
12	29	0.038	2.7	9.0	1.8	2	23	810	831	809	831	0.96
13	29	0.0043	0.31	12.0	0.9	1	23	841	863	841	863	0.98
14	29	0.3	22	6.2	3.6	2	23	890	911	889	911	0.95
15	29	0.0018	0.13	13.2	3.7	1	23	922	944	922	944	0.97
16	29	2.2e-05	0.0015	19.2	0.4	1	23	952	974	952	974	0.98
17	29	0.0002	0.014	16.2	0.6	2	23	994	1016	993	1016	0.97
18	29	0.055	3.9	8.5	0.2	1	23	1034	1056	1034	1056	0.94
19	29	0.35	25	6.0	3.0	1	23	1063	1085	1063	1085	0.96
20	29	0.007	0.5	11.3	0.6	2	23	1096	1118	1095	1118	0.95
21	29	0.011	0.8	10.7	0.2	1	23	1140	1162	1140	1162	0.97
22	29	0.024	1.7	9.6	0.2	2	23	1243	1264	1242	1264	0.94
23	29	0.29	21	6.2	2.8	5	23	1274	1292	1272	1292	0.94
24	29	0.0036	0.26	12.2	1.8	2	23	1303	1325	1302	1325	0.95
25	29	0.0047	0.33	11.9	1.0	2	23	1342	1360	1342	1360	0.96
26	29	1.7	1.2e+02	3.8	2.3	2	20	1364	1382	1363	1384	0.92
27	29	0.27	19	6.3	2.2	2	23	1433	1454	1432	1454	0.94
28	29	0.0058	0.41	11.6	0.9	2	23	1465	1487	1464	1487	0.96
29	29	0.67	47	5.1	2.7	2	20	1525	1543	1525	1545	0.93

Sequence Information

Coding Sequence: ATGGCCCTCAAACTCGGCAAATGCAGATTGTGTCTTAAACTCGGCGACTTCTACTCTATTTTCACGGTCGACAATGCTGTCCAGCTCTCGGATATGGTTATGGATTGCGCGAGAATAAAAGTATATGAAGGAGATGGCTTACCAGATAAAGTCTGTGCAGAGTGCATACAGAAGCTCAGCAGTGCTTACATATTCAAACAGCAGTGTGAGAGAGCTGATCAGGAGCTGCGACGGAATTATGTTCCTCCTCCAGGCTTTAGTATCAGCCCTCCACCACCAAACAGACAGAGCAGCGATTCAGCGTTCTCAACTCACACTGACAGTTCCAACTTGAAGTCATCCTTTATCGAGAGCAAAGTAACACCCGCTAATAGAAGCAGAAAGAGAAGTATCGAGAGTGACAATGCCTCGGAGGCGAGTCGATCGCAAGACTATGGACGACCATCCAGCTCCAAACGCGTCGAGGAGTTGCGTAGAACACAAAAACGTCCGCGTCTCTCCAATAACAACTCACAATGCGACTCTGACTACGAAGACAACGGGGGCTCCAGCTACGTACCCGAAACGGACATCGATTCGGACGAACCTCTCTTCAACCCTGACGAGATCAAGTGCGAAATCTGCAACAAAATTTTCAAATGGAAGAAGAGTCTGAGGTACCACCTGAAGAATGTGCACGGAAAAGATGATAGTTTCATTGCAATCGCATTGTCGGGTAACGCCAGCGCCGCTAGTACGCCCAAATCAGCCGCTAACACGCCAAAAGCATTTGCTAATACATCCAAAGCAGCTGCCAATTCGTCCAAAGCAGCCGCCAACACGTCGGGCAATGCCAAAGACGATGACGAGAAACTCAGCTGCACCCGATGCGACAAAACCTTTAAACTGAAGATCATGCTCAAGAGACATTTGGACTCGTGTACTGTCAAAACGCCCGTTAAGTCACCAATCAAATCGCCGCAAAAAGAACTTTTCATATCACTGGAGCCGATCGACGCCGTACACAAGATTACCGTCAAGAAACCAACCTGCGAGTACTGTACGGCCAAATTCAAAACGGTCGACAATCTCGAGAAACATCTACGGATCGTGCACGCTGCGGTGTTAAAGAAAGAAATAGAGGTGAAAGAGGCGAAGGCGGGTCCGAAGCCGGGGCTGAAGTTCAAAGATGGTCTTTTCAGGCTGCCATGTGTGTACTGCGATAAGCCTTTCGATGATTATTACGTACACCAGTCGCACTTCCAGACGTGTCCGAAGAAGGACTCTCGGTCGGTATTCGTGTGTCCGATCTGTCAGAAGGTGTCGAGTCGGAAGAACGGCTACTTCATCCACATCAAGAACATCCACTTCGAGCCGTTCGCGGATCCACCGGCCGGCGCGGATGACGCGGAGGCCTCCTTCGAGTGCCGCATCTGTAGTAAGAAGCTACTCTCGCAGGAGATGCTGGTCACGCATCTCGCCGCACATGCCTCCAATATAGACGATGACAATGACGACGTACACGACGATGGCGATTCGAGACCTAGTTTTGACGATTCGGCATCGACACACAGCCAGCCGGCGACAAGTGGGTTGCTGAAATGCCGCACGTGCGACAAAGAGTTCAAATACCGCAAGTCCCTCGTCTCTCACGAGATGAAGCACACGGAGGACGAGATGAGGGTGAAGAACGAACCGCCGGACAAGCTGTCGTCGATGAGCCTCCTCAGCGAGACGCAACGAGACTCCGATTTTGAATCTAGTCAAGACGACGACGAGGCGGACGATCTCACTTGCGATATTTGCGAAAAGATGTTCTCTTACAAACGCTTGCTCGATCACCATAAAAGGACCAAACACAACATGTCCTCTGGCACGAAGCGAGCGAAAATCAACCTTAAAGACTGTTCGGTAAGGTGCTTGCTTTGCGACGTTGAAATGAAAGTGAGCGCTATAAATGAACACAATCAGAAGCACATCTCTATGAACATCAAGCCCAGGAATATCTACACTTGTGCCGAGTGTGGGCAGAAGTTCAAGAGTTGCAGCAATTTGGCGAATCATATTAAACTGGTTCATAGGCTGAAGCAGACCAAGGACCAGGTGCCCCGGCAGTTCCTGGGCGCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACGATATCCAGAGTCACAACGGCTTTGGCGAGGTTCCGTCGCAGACGGCTCCGACCGTGGACCTGAGCGGGTTCACGTGTCCCATCTGTGGGAAGAAGATGCCCACACTCATCTCACTGAAGCGTCACGTCAACTGGCACAGCTTCGTGGGAAACAGCCTCGAGAAGAAACATGAGTGCTTCGTTTGTAAAGAGACATTCAGATTCCAATGCCACTATAAAGTTCACATGCGTGAGCATTACCACGATCCCAACATCGACCCGGCGCTCCTCACTTGCACCATCTGCAACCGCAAGAGCAAGCATCTGCGAGCGGCGCAGGCTCACATGAACTACCACAAGCAGACGCGCTTCAAGAACAAGGACTATCAGTGCAGCATTTGCAAGCGAGTGTTCCAGTACCGACGCGTCTACCTCTCACATATGGCCATACACTACAAGAAGGGAGAGAGCGCCATGAACACTGTCGTCGGAGACGCGCAGTTCAATACGCAAGCGGCAGACGGAACCTCGTCCTGCCATCTCTGCGGAAAGGTCTGCCTTTCGGAAGTGTCGTTGAAGCATCACCTCATCTGGCACAAATCGAAGACGCTCTTGTACGGCGCGAGACACGAGTGCCAAATGTGCCAGCTCCAATTCACTAACAAAAGACATCTGGAGCTGCACGTCCGAGCGCACTACGAAAACGAGAACGGACCCTACAAGTGTAACATCTGCGGCAAGGGGTACATAGACGAGGAATACATGCGGCGGCATCAGAAGGGACACAATTTCGATCACTCCTCGCACAAGAAACGGCTCGAGAAACTCCGCAAGGACAAAGTGAAATGTCCGATCTGTTCGCGGTACTACCCGGATCTAGTCCATCTCATTCGACACTTGCGCCGCACGCATCCCGAGTCAAAGATGATCAAAGAAGACCCAGACGCTCCGCCACCCACCTATTTCTCTTGCAAACTGTGCGCGAAAATTTTCGGCGACGAGGCGCGTCTCAAAAAGCACGAGGAGGCTCATTTACGGAAGCCGAATTTCTTCCGCTGCAAGTTTTGCGGCAAGAAGACAATATCGCTCAAATCGCACAACGTCCACATCAAGGCGCATCTCACTAGGAAGCACGTGGACAATCCGTTAAAGTGTCCTCAGTGCGACGAGGTGTTCGTGCTAGGGTACGCGTTGCACCATCACTTGAGAGATGTCCACGGAATCAACGAGACGTGGATAGCGGAGCGCGCCGACGTGCCTCTCTCGGGTCCGCTGAAGGAGTTTCAGTGCGCAGTGTGCCTCAAAATTCTTGCGAGTAAAGGGAACTTCGAGCGGCATCTCGATTACCACAACTCTCTGCGCTGCAACTATTGCTTCGACTACTTCAGCGGGCTGCGGTTCCTGGAGGGGCACCTGGCGTTCAGCTGCGAGAAGAAAAAACTAGTGGGCGACACGGAGGTGCACCCGCGACGGATCAAGTGCGAACTTTGCTATAAGGCGTTCCATCTACAGGTCAAACTAGACTGCCACTTGCGCACACGTCACGGCGTGTCAGTGTCGAGGCGCGCGGGCGCGGCGTCCCCCGACACCGTGTGCGACTACTGCTTTAGAACATTCGAGAACGAGTACGCGCTCGCTGGACATAAGATATACCACCGCACCGTCGGCTACTTCGGCTGCATCTACTGTCCGCGCAAGTTCAACACGCGCGTCGCGTACAACAAGCACAAGAACCACCATTTCAACACAATGAACGTTGACGAGCCGACCAAGTGCGAGCACTGCGACCAAACTTTCGTCTACTTCCGGGACATGATATACCACATGCGGGACGACCACGGAGACGACAAGGACTGGATCGTATTGCCCAAAGACTCCATCGAAGAAAAGTGCCCCATCTGTGACAAAGTGTTCTTCAACCTGCAGCGACACCTCCAATACCACGAGGAGAACAAGTGCAAGAAGTGTAACGAGTACTTCTATTCGAGACTGGATTTCGATAACCATCTGTGTGCTATCGAGAGTGACGCGGAGGAGGGATCCTTCGCCGGAGACACGCCCGCGCGAGCCTACGAAGAGTGCAAGTTCTGCTTCAAACCCATCACGAAGAAGGACTCCAAAAAGAAGCACGATATACTTCACGGCACGTCTGGCGCTATCTCGTGTCGGTTCTGCCATTTAAAGTTCAAAACTCTAGAAGCGTTTAACATCCACGCGTTCTCCCACCGCAGCCGTAAGTACGTGAAACGACCAATCAAATGCCGCGTGTGCAAGGAACGATTCATCAAGTACGGCTTGTTCGTGAGGCATATGAAGAACGAGCACAAATCGACTAAGAAGATGCACTATCGCGCCGTCGTGAAGGCGGAAAAGTGTGTGATATGCAGCGAAATGCTCCCCAACTTGCACAACCACTACCGAGCGCATCTGACGAACCGCTGCCAGCTCTGCTTCAAGTATTTCACATCGTCTCGTCTGTACTCGCGTCACGAATGCGGCAAAGAGGATGCGGATCCTACTAAAGTGTTCACGTCCGAGGCTGATTTGCCCGAGCTCATATCCTCTTACGTACCCAAGGACCAGAAAGACGATGAGAAGTTTTATGGGTACACTGATGACGAAGAAGATGAGATCGAAGCGCAGGCCGAGATGGATGCACAGGCTGAGAAAGAAGCGCGACCTAAGGCTAAAGTCCTCAAGACTTACTCGAAAGCGAAGCCGAAACCGGCGTTGCCCAAACCTCCGCCGATAGACAGCCAGCTCGCAGAAGACGAGAGGAACCTACACATGATGGTGCAGTCTCCGATCATCTCTGACGTGCTTTCTCTATATCAGAAAGAAGCAGATGGAGACTCCAAAAGTCAGTCGAATCAGTTCGGTGAAATCGTAGACCTCAGTGACGATTCCTTGGACGCTACGGATTTGAACGCGCCCATCGTAATCATCGACGATTCTAGTTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAVQLSDMVMDCARIKVYEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNLKSSFIESKVTPANRSRKRSIESDNASEASRSQDYGRPSSSKRVEELRRTQKRPRLSNNNSQCDSDYEDNGGSSYVPETDIDSDEPLFNPDEIKCEICNKIFKWKKSLRYHLKNVHGKDDSFIAIALSGNASAASTPKSAANTPKAFANTSKAAANSSKAAANTSGNAKDDDEKLSCTRCDKTFKLKIMLKRHLDSCTVKTPVKSPIKSPQKELFISLEPIDAVHKITVKKPTCEYCTAKFKTVDNLEKHLRIVHAAVLKKEIEVKEAKAGPKPGLKFKDGLFRLPCVYCDKPFDDYYVHQSHFQTCPKKDSRSVFVCPICQKVSSRKNGYFIHIKNIHFEPFADPPAGADDAEASFECRICSKKLLSQEMLVTHLAAHASNIDDDNDDVHDDGDSRPSFDDSASTHSQPATSGLLKCRTCDKEFKYRKSLVSHEMKHTEDEMRVKNEPPDKLSSMSLLSETQRDSDFESSQDDDEADDLTCDICEKMFSYKRLLDHHKRTKHNMSSGTKRAKINLKDCSVRCLLCDVEMKVSAINEHNQKHISMNIKPRNIYTCAECGQKFKSCSNLANHIKLVHRLKQTKDQVPRQFLGADLADFCEVVVTKAEPLDDIQSHNGFGEVPSQTAPTVDLSGFTCPICGKKMPTLISLKRHVNWHSFVGNSLEKKHECFVCKETFRFQCHYKVHMREHYHDPNIDPALLTCTICNRKSKHLRAAQAHMNYHKQTRFKNKDYQCSICKRVFQYRRVYLSHMAIHYKKGESAMNTVVGDAQFNTQAADGTSSCHLCGKVCLSEVSLKHHLIWHKSKTLLYGARHECQMCQLQFTNKRHLELHVRAHYENENGPYKCNICGKGYIDEEYMRRHQKGHNFDHSSHKKRLEKLRKDKVKCPICSRYYPDLVHLIRHLRRTHPESKMIKEDPDAPPPTYFSCKLCAKIFGDEARLKKHEEAHLRKPNFFRCKFCGKKTISLKSHNVHIKAHLTRKHVDNPLKCPQCDEVFVLGYALHHHLRDVHGINETWIAERADVPLSGPLKEFQCAVCLKILASKGNFERHLDYHNSLRCNYCFDYFSGLRFLEGHLAFSCEKKKLVGDTEVHPRRIKCELCYKAFHLQVKLDCHLRTRHGVSVSRRAGAASPDTVCDYCFRTFENEYALAGHKIYHRTVGYFGCIYCPRKFNTRVAYNKHKNHHFNTMNVDEPTKCEHCDQTFVYFRDMIYHMRDDHGDDKDWIVLPKDSIEEKCPICDKVFFNLQRHLQYHEENKCKKCNEYFYSRLDFDNHLCAIESDAEEGSFAGDTPARAYEECKFCFKPITKKDSKKKHDILHGTSGAISCRFCHLKFKTLEAFNIHAFSHRSRKYVKRPIKCRVCKERFIKYGLFVRHMKNEHKSTKKMHYRAVVKAEKCVICSEMLPNLHNHYRAHLTNRCQLCFKYFTSSRLYSRHECGKEDADPTKVFTSEADLPELISSYVPKDQKDDEKFYGYTDDEEDEIEAQAEMDAQAEKEARPKAKVLKTYSKAKPKPALPKPPPIDSQLAEDERNLHMMVQSPIISDVLSLYQKEADGDSKSQSNQFGEIVDLSDDSLDATDLNAPIVIIDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634735;
90% Identity: -
80% Identity: -