Ladu012818.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- TMEM164
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000355.1:592355-596380[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-12 1.7e-09 37.6 0.0 2 41 23 63 22 64 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGAAAAAAAAATATTAAAGAGCCAGGTGTGCGTAAATATGGCACCATATCAAATTACACGCAGGAGATGTTGGATGACGCCATAAATAAAATAAGATCTGGTGCATTAAGCCAAAGAAAAGCATGTAAAATTTATAAAATACCTAAAAGCACTATTAATCTTAAACTTAAAAATAAACATAACAAACCTGTGGGACGTCCTACATGCTTGACGATGGACGAAGAGATTATTTTTAGAGACCACTTGCTAGCGCTAAGTGACTTGGGTATTCCAATTGGCTTACAAGATTTTAGAGATGTAGTTAAAAGATACTTGGATAACATTAGGAAAACAGTTCCTGTGTTCAAAGACAACAGCCCTGGATATGAGTGGGCAAAACTTTACATGGAACGGCATCCAGCCATAAAAGAAAAAATTGCTCACAAGATCTCCAGGAAACGCGCTCAAGTAAATGAAGACATGGTGAACGAATTCTTCGACAGGCTTGAAAAAGAGATGGAAGACGTTAGCCCTGAAAATATATATAATATGGACGAAAGCGGATTCCATGATGACCCTGGAAAAAAAAAACTTTTATTCAGACGTTCCACTCGCCACCCTGAACAGGTGAAAAATTCCAGTAAATCTTGTTTTACCATAATATTTGCTGGGAATGCTATTGGAGACATCATTCCTCCATTCTTCATATTTAAAGGGAAACATTGTTGGTCCGACTGGCTTGTTAATGCCCCAAAGTCTTTAAAAATGGCTGTTTCAAAGTCTGGCTGGATAGATGCTGATATTTTCGAAGAATGGCTAGAAAAACATTTTGTGCCAATTGTTGACCAAAAAGAAGGAAAGAAAATTCTTATATGTGACAATTTAAGTGCACATATAAGTGTAAAAGCTCTTAAGATCTGTGAAGAACACAATATCAAATTCATATGCCTCATACCCAACTCGACACATATCCTACAACCCTTGGATGTAGGATATTTTTCATCTCTAAAGTCAGCTTGGCGAACAGTGCTCAACAAATGGCGTCAAACAGAACGAAGAAGAAAAGCTGGAGCACTACCTAAAAACGTGTTCTGCCAGCTTGTCAATTCAGCGCTTCAACTGAATGAATCCACAGCAGGGATTAATATGATAGCAGGATTCAGAAAATGTGGTATTTTCCCATGCTCACGTATTGAAGTCCTACAAGTGTTACCTTCGTACGCAACTGGCCACATCCAAGCTACTGTTGGGGACACATTTAAGGAATACTTGCAAGAAATAAGAGCGGCGGACTTAAATATAAAAACAACCAAGAAATTCCAGCTGCCAGTTAAAGCAGGAAAGTCAATTTCCGCCGAAGAAGTGGAAAATTTTTATAAAAACAGACAGAAAGAGCAGGAGAAGAAAAGGGAAAATCCTGTAAAAAAAGGAAGGCCCAAAGGTTCTAAAAACAAAAAAACCACGAAGAAATCGGAGGTAGAAAAAGAAGTAATAGAAAAAAGTGGACAGGCAGCGGCTGAGATGGAATTCGATAATCACGAGCCAGAGGACGAAGACTCACAAACGGAATGTTTTGAATTGATGGTAACAACAGCTCAAGTACACGATGAGCCAAAAAACCTAGATTCCGAACTGGACAAAATTAAAGAATGGATTAATAATGAAGTAGAGCTGACTGATGACTGCATTGCTGATTTTGGCCAAGAAGAACAGCAGAGAACAAGAGAACAGAGAAATAAAGAAAAATCCAGGAGTGTCAAGTACAAAAGAGCCAAGAATAACATAAAAACTGAAAGTGTTCAGGACAAACAAGAGAAATTAACTGATAAAATACGAAAGAATAAACGGAAGAAGTCATCTCGAACCAGCGTATATCCAACAAAAAAAACGAAAATCGATGACATTATAGAGCATTGGCAAGACAATCATGAGCCAATCCATGATAATGAGATAGAGGTGATTGATGAATGCATTCTTAATGCTGACGATAAGGCAGAGCTACCGATAGGGAATTTTTCTGAGACAATCACTGGAGAGTACGTTGTTCAAGACAGTGGACAACTCGTCAAATTTCAAAACGAAGAAGAAACATATGAATTAAACAGATATTGCGTATTTCAAGACGAAGGAAGTCTTTTTCCAGGGCGCATTACCAAAATTGCCCAATCACCATATGAAATATGGCCGGCGCAAGTAAACCTGAACCACATGCTATGCCCTGCTATCCTGGACCCGTTCGACGGGCCCTGGTACCGGATCGCAGCCGTCACTCACCAAGCCCTGCTCTGTCCGCTACTATGTAAGTTCTTCTGCGTCGTCTCCGACTTCTGCCTCACCAAGTTCCCACCCACCAAGGTGAAGGTGCATATGAAAGACTCTCTGCAAGAGTGTCATCTTTCACAGAAACAGTCTAAGTGTGATTCGGCACTCGTCCACGCTGATTAG
- Protein Sequence
- MPRKKNIKEPGVRKYGTISNYTQEMLDDAINKIRSGALSQRKACKIYKIPKSTINLKLKNKHNKPVGRPTCLTMDEEIIFRDHLLALSDLGIPIGLQDFRDVVKRYLDNIRKTVPVFKDNSPGYEWAKLYMERHPAIKEKIAHKISRKRAQVNEDMVNEFFDRLEKEMEDVSPENIYNMDESGFHDDPGKKKLLFRRSTRHPEQVKNSSKSCFTIIFAGNAIGDIIPPFFIFKGKHCWSDWLVNAPKSLKMAVSKSGWIDADIFEEWLEKHFVPIVDQKEGKKILICDNLSAHISVKALKICEEHNIKFICLIPNSTHILQPLDVGYFSSLKSAWRTVLNKWRQTERRRKAGALPKNVFCQLVNSALQLNESTAGINMIAGFRKCGIFPCSRIEVLQVLPSYATGHIQATVGDTFKEYLQEIRAADLNIKTTKKFQLPVKAGKSISAEEVENFYKNRQKEQEKKRENPVKKGRPKGSKNKKTTKKSEVEKEVIEKSGQAAAEMEFDNHEPEDEDSQTECFELMVTTAQVHDEPKNLDSELDKIKEWINNEVELTDDCIADFGQEEQQRTREQRNKEKSRSVKYKRAKNNIKTESVQDKQEKLTDKIRKNKRKKSSRTSVYPTKKTKIDDIIEHWQDNHEPIHDNEIEVIDECILNADDKAELPIGNFSETITGEYVVQDSGQLVKFQNEEETYELNRYCVFQDEGSLFPGRITKIAQSPYEIWPAQVNLNHMLCPAILDPFDGPWYRIAAVTHQALLCPLLCKFFCVVSDFCLTKFPPTKVKVHMKDSLQECHLSQKQSKCDSALVHAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635329; iTF_00032835; iTF_01182667; iTF_01182666; iTF_01182643; iTF_00033747;
- 90% Identity
- iTF_00032835; iTF_01182666; iTF_00033747; iTF_01182643; iTF_01182667;
- 80% Identity
- -