Lnig016656.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- pnr
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010001430.1:115160-125163[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7 4.2e+04 -5.6 3.4 20 26 12 18 10 18 0.78 2 4 0.39 2.4e+03 -0.6 0.1 20 26 55 61 54 64 0.79 3 4 0.38 2.3e+03 -0.5 0.5 3 15 177 190 176 196 0.76 4 4 7e-18 4.2e-14 53.0 3.4 1 35 350 383 350 384 0.98
Sequence Information
- Coding Sequence
- ATGTGCAGTGTGCCACCAAGATTCTATGAGCTTTGCCGTCTTTGTTTATCCTGTGATGGTGTGAAATCATCTATTTTCGATGATGAAGGAACTCAACATAACTTTCCACTTAAAATAATGACGTGTCTCTCTATATTGGTATCAGATCAAGACTTATTACCGCCTTTAATCTGCAATCGCTGTGTCTACAAGTTGGATGTTTTATACGAATTCAGGGAAGCATCAAGAAAATCGGATATCATTCTTAAGCAATATCTCAGTTACACGGAAACCTTATCTGCTGAAACACAGGAGCAGGCGAAGAAAGCTCCCACGAAACCCACCAATGGAGAGAGAGTTCCGGATTGTAAGTCTCCAGCTGACCTTGTGGTAAAAGTCGAGCCTAGCGATGTTGTTCAAGTTGAGATGACAAATGGTGACCAAGACGATGAGAACGGGGCGGAATCGGAGGCGGAATGCGGCCTCGATATGTCGATGGACGTGCAAGACCGCGATCGTGACAGAGGGCGAGAAGAGGAATCTGACGAGGAATGCTCCACTGACGAGTCGACAGAACACTGGCAGGGGAACAACAGCCGGACAATCTCCATCGAGTTGGGCAGCGGCGGGGAAGCCAGCAACCTGCTCAGGACTCTAATCTCGTGCCGCCGCCTCGGCATCACGCCGACAGAAGCCGCAGCCAACAACAGAGTGTCTCCGCAGTCGCTACTCAAGCCCCGCGTCAAGCCCGCctcgaccaatcacaagccgaCGTCGCTCGATCAAGAGCAGGCGGCACACTCCGGCGTTCTCGGCAACCGCACGAACCTGCTGGAGGGCGGCGAGTGTGCTTCCGACTCCGGCAAGGGCAGCACGGGGAGCGGAGGGGAGCGGGGCGGGGAGGGCAGTCGACGCAAGCAGAGCTGTCCGGCCAGGGCAGCGGTAGACGGCGAGGTGGAGGGAGCGGAGCCGGGCTTCGTGCCGGACTTCACCGGCAACAGTCCCTGGTGCCACATCGCCACCGTCAGCAAAACAGGCAGACTGGCAGCTAAGCGCGTGGACTTGTCGTGCTCGAACTGCGGCACCATGACGACGACCATCTGGCGGCGCAACGCAGACGGCGAGATGGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCGTCAACCGGCCGTCCACGATGCGGCGGGACACCATACACACGCGCCGTCGCCGGCCCAAGGGCGAGAAGGGGGACAGGGATAGGCGCAGATTCAGAAACAGAGTAATTCTTCCTAATGACATGGCAGTTCTCAGTTCAGgCGCTGGCGGAGGCGAACCGCTCGACATGCTCACCGCGCTTCGCCGCCAGATCCAGCCGCACCTGATGCTCGCGTTGCAACACTCCGAGTCGAAGCGGCTCGCCGCCTCCGGAGACCAGTCTCCGCTCCTCGACATCAAGACCGAGCCGATGGACTCTGACTCTGAAGACAACTTGTCCGAGACGCCTCTCAACCTCGTCGCGACCACGTTCGAGACGGAGTGA
- Protein Sequence
- MCSVPPRFYELCRLCLSCDGVKSSIFDDEGTQHNFPLKIMTCLSILVSDQDLLPPLICNRCVYKLDVLYEFREASRKSDIILKQYLSYTETLSAETQEQAKKAPTKPTNGERVPDCKSPADLVVKVEPSDVVQVEMTNGDQDDENGAESEAECGLDMSMDVQDRDRDRGREEESDEECSTDESTEHWQGNNSRTISIELGSGGEASNLLRTLISCRRLGITPTEAAANNRVSPQSLLKPRVKPASTNHKPTSLDQEQAAHSGVLGNRTNLLEGGECASDSGKGSTGSGGERGGEGSRRKQSCPARAAVDGEVEGAEPGFVPDFTGNSPWCHIATVSKTGRLAAKRVDLSCSNCGTMTTTIWRRNADGEMVCNACGLYYKLHGVNRPSTMRRDTIHTRRRRPKGEKGDRDRRRFRNRVILPNDMAVLSSGAGGGEPLDMLTALRRQIQPHLMLALQHSESKRLAASGDQSPLLDIKTEPMDSDSEDNLSETPLNLVATTFETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -