Lnig038975.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- gata4
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010005804.1:1-11006[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 1.7e-14 54.3 3.2 1 34 60 92 60 94 0.97 2 2 1.1e-19 6.5e-16 58.8 4.3 1 35 114 147 114 148 0.98
Sequence Information
- Coding Sequence
- ATCACCGCCTTCCTTAGCAAAGCCAACCCGAACATTGTTATCTGGAAACCAAACCACAAGCAAGCGACAGGTTGTGTGCCGCCGAGTTCCCGCGGGGCTGTGTCTCCCCCGCCCGCCCGTATTGACCCGACCCTCTGTACAGTGGACGCCGCGGACTACTTCAGCGAGGGGCGGGAGTGCGTCAACTGCGGCGCCATCTCGACGCCACTGTGGCGCCGCGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATGAACGGCATGAACCGGCCGCTGGTCAAGCAGCCGCGACGACTGTCGGCGTCTCGGCGAGTCGGTCTGTCGTGTTCCAACTGTCACACGACCACCACGTCGCTATGGAGACGGAACACGATGGGAGAGCCCGTGTGCAACGCGTGCGGACTCTACTTCAAACTGCACGGTGTCAGCCGGCCGCTGGCCATGAAGAAGGACAGCATTCAGACTCGGAAGCGGAAGCCGAAGAGCGGCAGCAAGATGGAGATGAGCGGGTCCAGCAGCGGAGGAGTCATCTCGTCTCATTCCTCGCTCAACAGCAAGCGCATGAAGCTCAAGTCCAACGGTGAGAACCGATCCAGACTGTACAACCCGTACGACTGCCGCTCCAGCGCGCCGCTCGCTCACCACAACAGCGGCAGCCTGAACCTCAACTCGTCTAACCCGAGCCACAGCTCGTCGCTGGTGACCGGCTCGCTCGCGTACGCCAGCATCTACTCCCAGCCGCCGTCGCAGCAGCAGCAGTTCCCCCACGGCCACCTGGCGACCAGTCCGCCGCTGACCAACTACTACAACCTCATACAACACCACATGACGCAGCAGGCCGTCTCCCCGAAGCTCGAGTGTCCGTCGCCGAGCTCCGACCAGCACTCGATGGGCTCGCACTCGCCCGAGAACCACTCCCCGCACATCGTGTCGCTGGTCAATAACAACGTGAACAGTAAAGTGATCGGCAATGGGGAGAATCTGGAGAGGCCAACGGTGGTGTCGATGTCTTCGTAG
- Protein Sequence
- ITAFLSKANPNIVIWKPNHKQATGCVPPSSRGAVSPPPARIDPTLCTVDAADYFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCHTTTTSLWRRNTMGEPVCNACGLYFKLHGVSRPLAMKKDSIQTRKRKPKSGSKMEMSGSSSGGVISSHSSLNSKRMKLKSNGENRSRLYNPYDCRSSAPLAHHNSGSLNLNSSNPSHSSSLVTGSLAYASIYSQPPSQQQQFPHGHLATSPPLTNYYNLIQHHMTQQAVSPKLECPSPSSDQHSMGSHSPENHSPHIVSLVNNNVNSKVIGNGENLERPTVVSMSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -