Lnig027323.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- myt1
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010002806.1:33087-35245[+]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 3.7e-14 2e-10 41.7 4.9 2 27 290 315 289 317 0.96 2 6 4.1e-15 2.2e-11 44.8 3.0 1 29 338 366 338 366 0.97 3 6 4.1e-15 2.2e-11 44.8 3.0 1 29 387 415 387 415 0.97 4 6 3.9e-15 2e-11 44.9 3.6 1 29 436 464 436 464 0.97 5 6 2.1e-15 1.1e-11 45.7 2.3 1 29 485 513 485 513 0.97 6 6 1.2e-14 6.4e-11 43.3 2.2 1 29 533 561 533 561 0.97
Sequence Information
- Coding Sequence
- ATGGAAATGCATGTGGCTCAATTGAAACAAGAAATGGAGCTGAAAGAGAAAAAGCTGAAGGAAGAGAAGCTGCAGTATGAGAAGAGTTTAAAGCAGCAGACGAAAGAGCAGttgaagaagatgaaggaagAAATGGAAGAAGAGGAGACTAGGCTAAAAGAAGAAATGGATAATTTGGAAAAGAAGTTGAAGCAAGAAATGAAAGATCAGAGGAAGAATACGAAAGATCGTATGGAAGAGCAGGAGATGAAgtttattcaagaaattgatGAACAGGAGAAGAACTGGAGAAGGAAAATGGAGCTCAGGATTAAGGATTTAAAACAGGAACTTCAGGATCAGGAGAAGAAAATGAAACGATATGAGGATGATACGACGGAAGATCCGGAGAACACTCGGAGACAGAGCGTggaaagagaagaagaaaagaaagtGCAGATGGAAATCAAATCAGTTATTCAGAGATTGAGGAAAAGAATAGAAGGAGAACAGAAAAAGAGTGAAGAAGAACATGAAGAACTTGATAAGAGGGAAAACCATGAAATAGAAGGGGAGACAAAGCAGACACAAGACGATCACGAGGAGAAGATGAAATATGACAAGGAAGATGAGGCGCAGATAGCAAAACAAATCGACGAAGAGAGAGAAAGAAGTCGAGAAGGCAAAGAACAAAATGTACAGGTGACCCAAGAAGTAAACGCCCAGAGTGAGCACATGATGTTCGTACCTAATCTATATCCTAACGGTCTGTTCAGCATCTCAAATTACCCCAACAACATCACCAGTATGTTCTCGATGAAGGATGCctatcatcatcagaagaagGCGGTGTCTGGATCAGGGTTGTTCAAGTCAGAGGGTGGTCATTGTCCCGTACCGGGCTGCGACGGTATGGGCAACGTCAACAGTACATACCTCACGCACCGATCATTGTCGGGCTGCCCCAAGAGCTCGTCAAGTATTGGACAGATCTTCACGTTTCCTTCGAAGACTCCCGATACCCGAGGAGGCAACTGTCCGCTACCGGGCTGCGACGGTGTGGGCAACGTCAACAGTACATACCTCACACACCGATCATTGTCGGGCTGTCCCAGGAGCTCGTCAAGTATTGGACAGATCTTCACGTTTCCTTCGAAGACTCCCGATACCCGAGGAGGCAACTGTCCGCTACCGGGCTGCGACGGTGTGGGCAACGTCAACAGTACATACCTCACACACCGATCATTGTCGGGCTGTCCCAGGAGCTCGTCAAGTATTGGACAGAGCTTCACGTTTTCTTCGACGACACCCGAGACCCGAGGAGGCAACTGTCCGCTACCGGGCTGCGACGGTGTGGGCAACGTCAACAGTACATACCGCACGCACCGATCATTGTCGGGCTGCCCCAGGAGCTCGTCAAGTAGAGGACAGAGCTTCACGTTTTCTTCGACGACACCCCAGACCCGAGGAGGCAACTGTCCGCTACCGGGCTGCGACGGTGTGGGCAACGTCAACAGTACATACCTCACGCACCGATCATTGTCGGGCTGCCCTCGGGCCGGTTTTCAAGTACTCAATCCGTACAGATTCATGGCTACTGCAGAGGTACGAGTAGGCAACTGTCCTGTGGCAGGATGCAACGGTGTGGGTAATGTCAACAGTGCGTACCGTACGCATCGCTCGCTATCAGGCTGCCCCCGGAGCTAA
- Protein Sequence
- MEMHVAQLKQEMELKEKKLKEEKLQYEKSLKQQTKEQLKKMKEEMEEEETRLKEEMDNLEKKLKQEMKDQRKNTKDRMEEQEMKFIQEIDEQEKNWRRKMELRIKDLKQELQDQEKKMKRYEDDTTEDPENTRRQSVEREEEKKVQMEIKSVIQRLRKRIEGEQKKSEEEHEELDKRENHEIEGETKQTQDDHEEKMKYDKEDEAQIAKQIDEERERSREGKEQNVQVTQEVNAQSEHMMFVPNLYPNGLFSISNYPNNITSMFSMKDAYHHQKKAVSGSGLFKSEGGHCPVPGCDGMGNVNSTYLTHRSLSGCPKSSSSIGQIFTFPSKTPDTRGGNCPLPGCDGVGNVNSTYLTHRSLSGCPRSSSSIGQIFTFPSKTPDTRGGNCPLPGCDGVGNVNSTYLTHRSLSGCPRSSSSIGQSFTFSSTTPETRGGNCPLPGCDGVGNVNSTYRTHRSLSGCPRSSSSRGQSFTFSSTTPQTRGGNCPLPGCDGVGNVNSTYLTHRSLSGCPRAGFQVLNPYRFMATAEVRVGNCPVAGCNGVGNVNSAYRTHRSLSGCPRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -