Basic Information

Insect: Leuctra nigra
Gene Symbol: PZF1
Assembly: GCA_934046545.1
Location: CAKOHC010000037.1:313448-315646[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0003 0.022 16.4 0.3 1 23 388 410 388 410 0.98

2 8 5.9 4.2e+02 2.9 1.4 1 23 414 439 414 439 0.83

3 8 0.0022 0.16 13.7 5.8 3 23 447 467 444 467 0.96

4 8 0.0013 0.089 14.4 1.4 1 23 473 496 473 496 0.93

5 8 1.2e-05 0.00083 20.8 2.9 1 23 502 524 502 524 0.99

6 8 9.5e-07 6.8e-05 24.3 1.2 2 23 531 552 530 552 0.97

7 8 8e-05 0.0057 18.2 2.4 1 23 558 580 558 580 0.98

8 8 0.00017 0.012 17.2 3.8 1 23 586 608 586 608 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0003	0.022	16.4	0.3	1	23	388	410	388	410	0.98
2	8	5.9	4.2e+02	2.9	1.4	1	23	414	439	414	439	0.83
3	8	0.0022	0.16	13.7	5.8	3	23	447	467	444	467	0.96
4	8	0.0013	0.089	14.4	1.4	1	23	473	496	473	496	0.93
5	8	1.2e-05	0.00083	20.8	2.9	1	23	502	524	502	524	0.99
6	8	9.5e-07	6.8e-05	24.3	1.2	2	23	531	552	530	552	0.97
7	8	8e-05	0.0057	18.2	2.4	1	23	558	580	558	580	0.98
8	8	0.00017	0.012	17.2	3.8	1	23	586	608	586	608	0.98

Sequence Information

Coding Sequence: ATGAACAGCTTTCTCACTTTCAAGCTGAACAGTACCGAAAATAATCGTAAACTGAGTGCGTCATTAAAGAAATATCAAGAAAAATACCGGTCAAAGGTGCCATCCCAGAAGAGGTTTTCCTCGCTATTCCGCACGAATCCCGCGCTACGCAACCAACTGGAGTCGCTGCGAACCGCTGCTCAGCCACCCAGGAACAACAACCACCACATCGAATCAGTCATGCTTCAACCGTATGAAGTGGACGAGTCGGATTTGATCGGATGCACAAGTTCCGAGGATCGTTCCGACATGTCCGACTGCGATTCCTCGGACCCGCTCAACCTAGAGTCAAAAACCTGTCTCGATGAACCTCAGGATTTACGTCAACTTGAAGCGAAAGACATGTCCCGTCCTGTTTTAGCAACTGAAATCAGATCTGTTTTCCAACTTCCATCCACTTCAGAGAGTTTAGATGTTAAGGACGATATTATAGACGAGTTTGCACTTTTACAAGAAGCGAAACCGCTCCCCACGACTTCTTCTAGTACTGTCATTCACCCAATCGCAACTACTGCCCCTCGGCCAGCTCAGCCACCTGTCAAGGGAGACCGCCAAGTAGAACATCCTACGCTATCGTTGCCAAATGACGTTGATGTTTCCGATTTCCTTGAGATTACAATGGACGGCGTTGACATGTCTGTTTCCCTCGATACTTTGACGAAGCGAGCTCTACCACCTAAACAAATCAATGAGAATCAAAGAGATTTTGTTCCTGACATGACTGCTGGAAGACTTACTGTAGATCAAGCCATGCTGGCTTCTGAATTTCTTGCAAGAAAATATGCTAATACTAAAAAATCCTCCTTTTTAATGCCGGGCGAGAACTTGTCTGTCTCAAGCGATAATATGGCGAGTAATGGAAGTTCACTTCAATCCAAATTCGAAAGGCAGTGGATGGAAATTAAGCAATTGATTGGAAATGAAAGAATTCAGAATTTAGGCCAAGCATCTAGCTCAAGATCTATTGAGAGTTTTGCCCCAATACCACTAAGTCCTCAACATAAGACTAAGAGAGAGCGGTATAAGAAAGATCCTCCGGCTGGAAACGGTTCTCCTAGGAAGGCTGTGGAAGGTAAACCGGGCGAAGAGGTTCAAGTGAAGGCGGAGGAGAGGATTCGAATGTACAAGTGCACGGAATGCGAAGAGACCTATCCGACGTATCGCACCTTGATCGATCACGTGCGAGGGCATGGCACTACGTTCGCGTGCAGTGTCGCCAACTGCGGCAAGACTTATTTCTGCAAGGAACTTCTTGACAGTCATTTATATCTCAAGCACAAGCGTGTGGACTGTGATCTTTGTTACGTGTGCGGCAAGACTTACAAACACATGCACAGTCTCCTCCGCCATCTCAAGGTACATTACGGCGAGGCTGATTTCAAGTGTAACGATTGCATCAGGAAATACACGACGAAAAGCCAACTGGAATACCACATAGTGAACTCTCATCTCAAACTCCGCACTTACACATGCGAGATTTGCCACCGCACGTTGACGTCGCAGAACGGTTTCCGTCGTCACATGCGAGTCCACAACAATCCGCACACCATCAAGTGCGAGCTGTGTCCGAAGACTTTCACGTTCAAGACTCAGCTTCAGCGACACATCCTCACTCACACGGGCGAGACGCCGCACAAGTGCGTCTACTGCGGACGGGAGTTCTCGCTGCGGGGGAATTACCAGACGCATCTGCGGCTACACACGGGCGTCAAGCCGTACATATGCGAGGTGTGCGGGAAGGGTTTCACTCACAACGTGTCGCGCAAGAATCACATGAAACACCATCTGCAAGAAGGCGGGGAGGCAGTAGCAACTACGTGA
Protein Sequence: MNSFLTFKLNSTENNRKLSASLKKYQEKYRSKVPSQKRFSSLFRTNPALRNQLESLRTAAQPPRNNNHHIESVMLQPYEVDESDLIGCTSSEDRSDMSDCDSSDPLNLESKTCLDEPQDLRQLEAKDMSRPVLATEIRSVFQLPSTSESLDVKDDIIDEFALLQEAKPLPTTSSSTVIHPIATTAPRPAQPPVKGDRQVEHPTLSLPNDVDVSDFLEITMDGVDMSVSLDTLTKRALPPKQINENQRDFVPDMTAGRLTVDQAMLASEFLARKYANTKKSSFLMPGENLSVSSDNMASNGSSLQSKFERQWMEIKQLIGNERIQNLGQASSSRSIESFAPIPLSPQHKTKRERYKKDPPAGNGSPRKAVEGKPGEEVQVKAEERIRMYKCTECEETYPTYRTLIDHVRGHGTTFACSVANCGKTYFCKELLDSHLYLKHKRVDCDLCYVCGKTYKHMHSLLRHLKVHYGEADFKCNDCIRKYTTKSQLEYHIVNSHLKLRTYTCEICHRTLTSQNGFRRHMRVHNNPHTIKCELCPKTFTFKTQLQRHILTHTGETPHKCVYCGREFSLRGNYQTHLRLHTGVKPYICEVCGKGFTHNVSRKNHMKHHLQEGGEAVATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -