Basic Information

Insect: Leuctra nigra
Gene Symbol: zag-1
Assembly: GCA_934046545.1
Location: CAKOHC010005466.1:170-3044[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.8e-05 0.0027 19.2 0.7 3 23 199 219 198 219 0.92

2 8 0.0078 0.56 11.9 1.3 2 23 295 316 294 316 0.97

3 8 0.016 1.2 10.9 0.5 1 21 322 342 322 343 0.96

4 8 0.0001 0.0075 17.8 0.8 3 23 395 416 394 416 0.94

5 8 2.1e-05 0.0015 20.0 0.7 1 23 424 447 424 447 0.98

6 8 0.025 1.8 10.4 0.0 1 23 455 477 455 477 0.97

7 8 0.00076 0.054 15.1 0.3 1 23 483 505 483 505 0.97

8 8 3.8e-06 0.00027 22.4 0.4 1 23 511 534 511 534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.8e-05	0.0027	19.2	0.7	3	23	199	219	198	219	0.92
2	8	0.0078	0.56	11.9	1.3	2	23	295	316	294	316	0.97
3	8	0.016	1.2	10.9	0.5	1	21	322	342	322	343	0.96
4	8	0.0001	0.0075	17.8	0.8	3	23	395	416	394	416	0.94
5	8	2.1e-05	0.0015	20.0	0.7	1	23	424	447	424	447	0.98
6	8	0.025	1.8	10.4	0.0	1	23	455	477	455	477	0.97
7	8	0.00076	0.054	15.1	0.3	1	23	483	505	483	505	0.97
8	8	3.8e-06	0.00027	22.4	0.4	1	23	511	534	511	534	0.98

Sequence Information

Coding Sequence: ATGATCAGTGATATGCTGGAAGCCTGCCGGCTGTGCATGTGCAGAGAGCAAGACACCATGAAACCAATCTTCGATCAACAGGGCCTGGCAGCAAAGATCATTTGGATTTCAGACCTCAAGGTGTATGAAGGTGACAATCTGCCGGCCCAGATCTGCCAGCAGTGCTACGTCAGGTTGAACTCCGCGTACTATTTCAAGGAGCAAGTAATCGGAATTGATCGTACACTTCGAGAGATGCTGGAGCAAGTTCTCACTTCACCAGTCAAGAGTACCAAGACCACAACCACTTCTAACAGTAAAGGTAAAGCAAACCAGAAACCTCGTTCCAGCAAACAAGTAAACCATTTCCAAAATGTGGAGGAGAATATATCCGAGACGGAGTGCTACGATGCAAGCAACTACGACAACGAAGAACTGCAGGAGGTAAAAATCGAAGTGACGGAGCATGCTGTCATTGAAGTTGATTCTGAAGAAGAGTTGCCAGCTGTGGTCCGTTTACCCGCCGTCGGTGTAAAGAAGAGGAAACCTCATCCTAAAAATCGTCGTCGCGATCGGAACTTTCTCATCGTCAACAACAAGCCTCGTCCTAATAAATGCATTGTGTGCCCAAAGGCTTTTATCACAAAGGCACATCTTACTAGACACATGTTGGTTCACGCTGCCGGCAAACCAGTGCGGGCTTACAAGAGAACATACGTGCGCCCACAAGAATCTCTAAACAACACATTCCAAACAAATACCTCATACGAAGACAATACAAACTCCTTGGACTTCACAGAAGATTCAAGCATTGGTACTCCGCTCTCCGTTGACTTGGAGAATTCTTTCGACAAAGTACAGCAGATTGCGGGTGTTCCAACTGGGGATGGTTCAACGGTGATTTCATGTCCTATCTGCCACAAGATCATCTCTCACAGAAACAAATTACCTGTTCACATGCGCATACATACAGGAGAAAAACCGTACAGTTGCATGAAATGTTCCCGGCGATTTGCAGATGGCGGTAACCGAACAAAACACCAACGTATTTGTACCGGTCAACAGGATCCAAATAAAACAGTCGCTCCCACATTACCTGTGAAAAATGTTACACCTGAAAGTTTACCCCCCAACTATTCTCCGACTACGAGACTGAGCAAGAAGGTCTTGTCAAGGATGGCCAAGGGAGGTAACACAGCTGACTGTCCGCATTGCGATGCCAAGTACACGAGCAAGTCCACTTTGTCCAGACATATTCTGGCCCTACACAGCGGGCGTCCACCGAAGACGTATCCCTGTGCCCTCTGCACCAAAGTGTTCTCGACGAATGGCAACCGGATGAAACACATTCGCATGTTCCATGGCATCGACAACACCAGCGACTTCAGCTGCGGTATTTGCGAGGTGATGTTGGGCTCCAAGGCGGCTCTGGTGTGGCACATGAAGGAGCATGTGGGCGAGCAGCCGTACGTCTGCACCATCTGCGACAAGGCCTTCGTGCTCGTGCACAGCTTCAATGAGCACATTGCGAACCACGCTCGAGACAAACCCTTCAAGTGTGATGTTTGCTCAAAGACATTCTACGAGAACGGTTTGCTTGTGAGGCACATGCGCATTGTTCATGACCTCTGGCCGGAAGAAACACTGGGCACCGGCGACACGGAACCCAAAGTAGAACTGCAGATAGATGAGAATGAAATAATGACCCATTCTTTGGAAAATGGAGATGAGTCTCTGGAAAATGGAAACATGACTATGGAAAACCCagatgaagttgtcacagaacaAGCCGATGCAATTTGTGCAGAATCAATGGATGCAGCATGTGAAGAATCTACTGATGCAGCGTTGATAACAGATACTGATAAAGTTGCTGACCAGTCTGAGATACCTGCTCCCGAGCTTGTGTTGCTGCCTGAAGGAGGGCCTGCTATTCTTATACCGAAAGTAGAAAGTGTTGAAAGTTTGATGGTCAATGAATCTGAGAACACAATGGATGTGGAGTAG
Protein Sequence: MISDMLEACRLCMCREQDTMKPIFDQQGLAAKIIWISDLKVYEGDNLPAQICQQCYVRLNSAYYFKEQVIGIDRTLREMLEQVLTSPVKSTKTTTTSNSKGKANQKPRSSKQVNHFQNVEENISETECYDASNYDNEELQEVKIEVTEHAVIEVDSEEELPAVVRLPAVGVKKRKPHPKNRRRDRNFLIVNNKPRPNKCIVCPKAFITKAHLTRHMLVHAAGKPVRAYKRTYVRPQESLNNTFQTNTSYEDNTNSLDFTEDSSIGTPLSVDLENSFDKVQQIAGVPTGDGSTVISCPICHKIISHRNKLPVHMRIHTGEKPYSCMKCSRRFADGGNRTKHQRICTGQQDPNKTVAPTLPVKNVTPESLPPNYSPTTRLSKKVLSRMAKGGNTADCPHCDAKYTSKSTLSRHILALHSGRPPKTYPCALCTKVFSTNGNRMKHIRMFHGIDNTSDFSCGICEVMLGSKAALVWHMKEHVGEQPYVCTICDKAFVLVHSFNEHIANHARDKPFKCDVCSKTFYENGLLVRHMRIVHDLWPEETLGTGDTEPKVELQIDENEIMTHSLENGDESLENGNMTMENPDEVVTEQADAICAESMDAACEESTDAALITDTDKVADQSEIPAPELVLLPEGGPAILIPKVESVESLMVNESENTMDVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00895138;
90% Identity: iTF_00895138;
80% Identity: iTF_00895138;