Basic Information

Insect: Leuctra nigra
Gene Symbol: RREB1
Assembly: GCA_934046545.1
Location: CAKOHC010000381.1:59224-76425[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.5e-06 0.0004 21.9 1.1 1 23 120 142 120 142 0.99

2 16 0.00025 0.018 16.6 0.2 1 23 159 181 159 181 0.97

3 16 9.9e-05 0.0071 17.9 2.1 1 23 187 209 187 209 0.99

4 16 2.4 1.7e+02 4.1 0.0 1 23 304 328 304 328 0.88

5 16 5 3.6e+02 3.1 3.6 2 23 334 356 333 357 0.93

6 16 0.47 34 6.3 0.2 1 20 406 425 406 427 0.88

7 16 0.44 31 6.4 0.1 1 23 556 578 556 578 0.96

8 16 0.12 8.6 8.2 0.1 1 23 585 607 585 607 0.98

9 16 0.0031 0.22 13.2 2.3 1 23 613 636 613 636 0.97

10 16 0.0045 0.32 12.7 3.3 1 23 991 1014 991 1014 0.95

11 16 0.00053 0.038 15.6 1.3 2 23 1259 1280 1258 1280 0.97

12 16 0.29 21 7.0 5.2 1 23 1286 1309 1286 1309 0.97

13 16 0.0041 0.29 12.8 3.8 1 23 1344 1368 1344 1368 0.97

14 16 9 6.4e+02 2.3 0.5 1 23 1420 1443 1420 1443 0.89

15 16 0.0072 0.51 12.1 0.5 3 23 1494 1514 1492 1514 0.96

16 16 0.016 1.2 10.9 5.9 1 23 1520 1542 1520 1542 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.5e-06	0.0004	21.9	1.1	1	23	120	142	120	142	0.99
2	16	0.00025	0.018	16.6	0.2	1	23	159	181	159	181	0.97
3	16	9.9e-05	0.0071	17.9	2.1	1	23	187	209	187	209	0.99
4	16	2.4	1.7e+02	4.1	0.0	1	23	304	328	304	328	0.88
5	16	5	3.6e+02	3.1	3.6	2	23	334	356	333	357	0.93
6	16	0.47	34	6.3	0.2	1	20	406	425	406	427	0.88
7	16	0.44	31	6.4	0.1	1	23	556	578	556	578	0.96
8	16	0.12	8.6	8.2	0.1	1	23	585	607	585	607	0.98
9	16	0.0031	0.22	13.2	2.3	1	23	613	636	613	636	0.97
10	16	0.0045	0.32	12.7	3.3	1	23	991	1014	991	1014	0.95
11	16	0.00053	0.038	15.6	1.3	2	23	1259	1280	1258	1280	0.97
12	16	0.29	21	7.0	5.2	1	23	1286	1309	1286	1309	0.97
13	16	0.0041	0.29	12.8	3.8	1	23	1344	1368	1344	1368	0.97
14	16	9	6.4e+02	2.3	0.5	1	23	1420	1443	1420	1443	0.89
15	16	0.0072	0.51	12.1	0.5	3	23	1494	1514	1492	1514	0.96
16	16	0.016	1.2	10.9	5.9	1	23	1520	1542	1520	1542	0.98

Sequence Information

Coding Sequence: ATGCAAGATATGGCCACCAGAGTGATCTCACCGGACCCAGCGCCACCCGGCCAAGATGACTGCGGCTGTGGTCCTGAGAATGAACAGGTCTGTGGTCGACAGCTTCCTGTTCCTGGGTCCAGCCATCTGCTGCCATGGCAACCGAATCTCTTGTTATCAGCCACCGCGATAGCAGTGTTTTGTTCTCACAGGCCTGAGCAGTTCTATTCGGCCTCGACTACTGGCGTTGAGATGCACGAGACGTCTCGGACCGACGCCGACGCCCCGCCGGACTCTTCTCCGACCCACCGGAGCGAGTCCGACCAATCGGAGGACCCCATGGAGATCAGCGACGAGCGACCGGATTCGGCGATGCGCTACGTCTGTCCCATCTGCGACAAGACACTCTCGTCACAGCACGATTTCACCCTACACATTCGCTCACACAATAACGCCAACGAGGTGGAGATGGCGTCCATCGTTGCCAAGGCAGGTTACGCGTGCAAGATCTGCTCCAAGGTGCTGAGCTCTTCTAGCTCCCTGGACCGGCACGTGCTGGTTCACTCGGGCGAGCGTCCGTTCAAGTGCCGCGTGTGCGCCGTGGCGTTCACGACCAACGGCAACATGCACCGCCACATGCGAACCCACAGCAGTCCCAAGAGCAACGATTACGAGAGTGACGGCAGCACAGACTCCACCGGCTCGCTGAACCACAACGGCAAGAGCCCCTCGCCgacaaacaacaacaacaacaacaacaatgtcAGCGCGAAGAAGAGGAGAGTCATGATCTTCGACAACGACAAGTCCCCGGACGTTTCCCCCGAGACGAATAACAACAACAAGCGAAAGGTCTCGGACGTGCTCGGGAGCGAGATGGACGTCGGCAAGCGGCGGATGAAGAATCTCGAGTTCTGCACGCCGCAGCGGTACCAATGCCCTGTGTGCGAGCGAGAGGACTTCGCCTCGCTCAACGTCCTGGAGACACATCTCGAGTCCGCGCATCCCGACTACAAGATCCGCTGCCGCAGCTGCGACCTCGAGTTCAAGAACCACCGCGTGTTGAACCTCCACCGCTTCATGGTGCACCACGACCGCGAGACCTCGGACAATTACAACTCCGTCCTCGGCTTCAAGGATCTGACCTTCATGGACTTCTCCAGCGAGAAGTTCCCTCACATTGCCCGGGCCATGTGCGAGCAGAAGATGCATCAGCCGGCGGTCGCGTGTGCCAGCTTCACGTGCGAGCGATGTGGCCGGGCGTTCCCGTGCGGCTCGGCGCTGAACATCCACCGCCAGGCGTGTCCCGGCGACGAGGGATACCCAACGGACCTCTCCTCGCAACGAGCCTCCTCGCACAGCGACcaggaggaagaggaagagcggAAGAGAGAGGACTTCTTCGCCGGCCTCGATCTGCAGAACAAGTCGATCCCCACGTCGCCGACCACGCCGGAACGTCGCTTCGAACGAGCAGCTTACCTGGCAGAGACCAAAGACTTAGCCGACATTCAGAGTATCATCTCTGTGACGAATGCCGGGGGATTGCGGCTGCAGGATCTGACAAAGTCACCTGTCGTCAACGGCAGTCTGACGCCCTCCGACAAGAGCTACTCCGACGTGAACGAAGAGGAGCAGCAAGACTGCTTTGCGTCCGAGTTCCGGAAGATGAAACTGAAGGGAGAGTTCCCGTGTCGGCTCTGCTCCTCGGTGTTCCCCAACCTGCGGGCGCTGAAGGGCCACAACCGCGCCCATCTCGTCAGCGGCACGGTGTTCAGATGCAACATGTGTCCCTACGCGAACCCCGACAAGGCCATCTTGATCCGACACATGCGCTCGCACAACGGCGATCGACCGTACGAATGCGCCCTCTGTAACTACGCCTTCACGACCAAGGCCAACTGCGAGCGACATCTCCGAAACCGTCACTCGAAGCTGGCGAGAGAAGACGTCAAGAAGTCGATCATCTATCATCCCTCGGAGGATCCGACCAACGATCTCGAGCTACAAGCCAAGATCTCAAGCGACGTGAAGAGATCGCTCAACTTCGACCATTCCGAGGAGCACAGTCAGTCCGAGAGATTCGAAGAGAAATACCAAAGCAAAGTCAGTCTCGAGAAGTCCAAGATGATAAACTTCGATCGGGATCGGTTTGAGCGTCATTCGCCGGCCGTGGAGCGACCCTGGGACACGCACGAGGTCGCCACGATGACGAGTCCGAACTGCGACGACAGCGAGACGAGCGAGAGCGACGAGGATGACGACGTCAGCAAGAACAACAGCCACAACGCAGCGTACACGCCATACCGCCGCAACGTCAACTCTCCGCTCGATCTCACCATGGACGTCCTGGACCTCAGCAAGAAGCCGGCTTCAAAGCCCTCGGGAGACGAGCCTCAGGACCTGTCCAAGAAGACTCTGGAGTTCAACAACAACGTGACGTCGCACTTGCAGGCGCAGTTGCTTGCGCGGCCGGCGAGCCCCGCGAAACAGATGCCCAAGGTCGAGCTGAATCTCTCGAGCTTCTATCCCACGCCTCCGCATGCGATCTATCTCAACAACAACACCTTCCCCTTCCCCGGACAGCCCTACATGAACCCCTACTTCCTCCCGCAGCAGCACCCCCTGGGCATGCTCCCGCCCGCCAGCCTGCAGGAGTTCGCGGAGATGAGAGAGCGCAGTCTGAAGGAGCTGATCCGCGGGCTGCAGATGTCCGGAGGAACCATGTTGGACCCCATCGCCATGGCAACGGCCGCCGACAAGCTGCAGCAGCTGCATCAACAAGCCCTGGTGGAGTTCACCAGAAGCAAGGAGATCAAGTTCGAGATGCCGGAGGAGCGAGTGCAGATCAAGGAGGAGAAGGTTAAGCTCCCGCCGACAAAGATGCCCGTGAAGCCGAGAGAGAGAGACAACTCTTCCGTGAAGATGGTCATCAAGAACGGAGTCCTCATGCCAAAGCAGAAGCAGCGACGATATCGCACGGAGCGACCGTTCTTCTGCGAGCATTGCTCGGCGCGCTTCACGCTGCGATCCAACATGGAGCGCCACATCAAGCAGCAGCATCCGGAGTTCTGGACCCAGCGCCAGCGCGGGAACATCGCCGGCGGCCGACGCAACCTCGGCATGAGCCAGGACTCCAGCAGCCACGGTGACATGAAGCCGCAGTCGCCGGCCATTCACATCCCTGCTCTCATCCCCTTCAGTCAGCACTTCGACCTCAAGCCCAAGCCCATCGACGAGCTCTACGAAGCCAAGGAGAAGCTGAACATcctcaacaacaacaacaacaaggtGTTCATCTCCAACGAAGTGAAGAACGCGATCGCCCAGCAGCTCAAGTCCAAGCTGAGTCAATCCAAGTCGCTGGACGATGAAGGGGAGTTGGTGATCGACGAGGAGGACGAAGACGTCGAGGACAAAGTCGAGGAGGAGGCAAAGAATCTGAAGAACGTCGGGTTCAAGACGGAACCGGTTCGCATCGACCTGAAGGGATACTTGAAGGAGGCGAAGGACAGAGAGGCTCAACGTAGGAAAGAGAAGAAGGAGGAAAGCGTTGACTTGGCCAGTGTCAGTCGGATGCTTGACAACGCCACCACGCAGACGCAGACGTTCCAGCAGTACTTCCGCGGGGcccaggaggaggaggagggccatggggaggaggaggaagaagacgaggagggcCTGGTGGCGGCCAGCGACCATTCCGGCAGCGACGAAAACAGATCTGACTTGGAGAGCAACACAGCGACCGGCAAGAAGAAGAGTGCGTACTCCCTGGCGCCGAACCGCGTGTCGTGCCCGTACTGTCACCGCAAGTTCCCCTGGTCGTCGTCGCTGCGCCGCCACGTGCTCACCCACACGGGGCAGAAGCCCTACAAGTGCGCGCACTGCCCCCTGCTCTTCACCACCAAGTCCAACTGCGACCGCCACCTGCTTCGCAAGCACGCCAACTCCACGCCGCCGTCGTCCGCCAGTCCCGAGACATCCCCGACGCTCTCGCAAGCCCAGACGGCATCCTACACGATGCGCAACGTCCCGGAGCGCCCCTACAAGTGCAATCACTGCCCCAGCTCGACTTTCTCCACGCTCAGCAATCTCAAGAAGCACGTCTCCACGAAGCATTCCGCTGCGAAGGCCAACGAGGAGGCGGCCAGCAACGATGAGAGCCAAGAGAGCGAGGAAGACGAGGAGCCCGAGGTGGTTGAGAAGGCGGAGGTGGAGGTTCGTCCCCCGGGCGATGCGGCCTCCACGACATCCTCCACCTCTGACCTGCCCTTCAAGTGTCATCTGTGCGAGGGATCCTACGGCGAGCGGCAAGAAGCGTTGGAGCACATCAAGGAGAATCACCCGACGGAGTTCATGCTGCTCGTGTCAAAGGGAGCGCTGGAGGCCGGCGGAGAGGACAATAACAACGGTAACGAGGAGGCAACGCCTGGCGAGGAGAGTCTGGAGCAGCTGAGAGGGAAGTTCCCGGACTACGCCAACAGGAAGGTGATGTGCGCCTTCTGCTTGCGCCGCTTCTGGTCCGCTGAGGACCTGCGGCGCCACATGCGCACGCACACGGGCGAGCGGCCGTTCAGCTGCGACATCTGCCGCCGGCGCTTCACGCTCAAGCACTCGATGCTGCGCCACCGCAAGAAGCACAGCGCTGCCGACGCCGGCGCGCTCAGCGGCGACGAGGACAGTTACAAGGTCGAGAAGACTCTCAAGGGATATCTGGCGGCCGCAGTCAAGGACAACGGATTTGTCGAGAACGGGAAGAAAGTCACCAATCACAACAATAACAATATCAAGGTCCCGAGCTCGCGGTACATCATGGAGAACCCGTGGCCCGGCGCGCGCTCTCAGGAAGACCGGAAGGAAGGGGAAGAAGACACGGACCTGATCGGGAACCTGCTGGGCATCCAGGACAAGTCCATCATTGACAAGATGCTTCTGTCCAAGTCGGCCGACGACGCAGCCATGCTCTTGGGCGTCGGCCGACGCGAGTAG
Protein Sequence: MQDMATRVISPDPAPPGQDDCGCGPENEQVCGRQLPVPGSSHLLPWQPNLLLSATAIAVFCSHRPEQFYSASTTGVEMHETSRTDADAPPDSSPTHRSESDQSEDPMEISDERPDSAMRYVCPICDKTLSSQHDFTLHIRSHNNANEVEMASIVAKAGYACKICSKVLSSSSSLDRHVLVHSGERPFKCRVCAVAFTTNGNMHRHMRTHSSPKSNDYESDGSTDSTGSLNHNGKSPSPTNNNNNNNNVSAKKRRVMIFDNDKSPDVSPETNNNNKRKVSDVLGSEMDVGKRRMKNLEFCTPQRYQCPVCEREDFASLNVLETHLESAHPDYKIRCRSCDLEFKNHRVLNLHRFMVHHDRETSDNYNSVLGFKDLTFMDFSSEKFPHIARAMCEQKMHQPAVACASFTCERCGRAFPCGSALNIHRQACPGDEGYPTDLSSQRASSHSDQEEEEERKREDFFAGLDLQNKSIPTSPTTPERRFERAAYLAETKDLADIQSIISVTNAGGLRLQDLTKSPVVNGSLTPSDKSYSDVNEEEQQDCFASEFRKMKLKGEFPCRLCSSVFPNLRALKGHNRAHLVSGTVFRCNMCPYANPDKAILIRHMRSHNGDRPYECALCNYAFTTKANCERHLRNRHSKLAREDVKKSIIYHPSEDPTNDLELQAKISSDVKRSLNFDHSEEHSQSERFEEKYQSKVSLEKSKMINFDRDRFERHSPAVERPWDTHEVATMTSPNCDDSETSESDEDDDVSKNNSHNAAYTPYRRNVNSPLDLTMDVLDLSKKPASKPSGDEPQDLSKKTLEFNNNVTSHLQAQLLARPASPAKQMPKVELNLSSFYPTPPHAIYLNNNTFPFPGQPYMNPYFLPQQHPLGMLPPASLQEFAEMRERSLKELIRGLQMSGGTMLDPIAMATAADKLQQLHQQALVEFTRSKEIKFEMPEERVQIKEEKVKLPPTKMPVKPRERDNSSVKMVIKNGVLMPKQKQRRYRTERPFFCEHCSARFTLRSNMERHIKQQHPEFWTQRQRGNIAGGRRNLGMSQDSSSHGDMKPQSPAIHIPALIPFSQHFDLKPKPIDELYEAKEKLNILNNNNNKVFISNEVKNAIAQQLKSKLSQSKSLDDEGELVIDEEDEDVEDKVEEEAKNLKNVGFKTEPVRIDLKGYLKEAKDREAQRRKEKKEESVDLASVSRMLDNATTQTQTFQQYFRGAQEEEEGHGEEEEEDEEGLVAASDHSGSDENRSDLESNTATGKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPYKCAHCPLLFTTKSNCDRHLLRKHANSTPPSSASPETSPTLSQAQTASYTMRNVPERPYKCNHCPSSTFSTLSNLKKHVSTKHSAAKANEEAASNDESQESEEDEEPEVVEKAEVEVRPPGDAASTTSSTSDLPFKCHLCEGSYGERQEALEHIKENHPTEFMLLVSKGALEAGGEDNNNGNEEATPGEESLEQLRGKFPDYANRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHSAADAGALSGDEDSYKVEKTLKGYLAAAVKDNGFVENGKKVTNHNNNNIKVPSSRYIMENPWPGARSQEDRKEGEEDTDLIGNLLGIQDKSIIDKMLLSKSADDAAMLLGVGRRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -