Lnig001051.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- ZBTB41
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010000079.1:38222-48145[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.57 41 6.1 0.7 2 23 151 173 150 173 0.95 2 21 7.9 5.7e+02 2.5 0.9 1 19 176 194 176 199 0.70 3 21 1.9 1.4e+02 4.4 0.6 3 23 227 248 226 248 0.96 4 21 5 3.6e+02 3.1 0.3 1 12 276 287 276 289 0.82 5 21 0.33 24 6.8 0.1 3 23 381 402 379 402 0.92 6 21 0.72 51 5.8 0.6 1 23 811 837 811 838 0.83 7 21 2 1.4e+02 4.4 0.4 1 23 912 935 912 935 0.96 8 21 0.015 1 11.1 0.8 1 23 943 966 943 966 0.98 9 21 0.28 20 7.1 0.2 1 21 977 997 977 1000 0.90 10 21 0.0013 0.096 14.3 2.4 1 23 1006 1029 1006 1029 0.97 11 21 0.13 9 8.1 0.3 3 23 1039 1060 1038 1060 0.97 12 21 0.016 1.2 10.9 1.2 1 23 1068 1091 1068 1091 0.95 13 21 0.0029 0.21 13.3 1.3 1 23 1097 1119 1097 1119 0.95 14 21 1e-05 0.00074 21.0 1.0 2 23 1126 1147 1125 1147 0.97 15 21 1.7e-07 1.2e-05 26.6 2.5 1 23 1152 1174 1152 1174 0.98 16 21 0.00039 0.028 16.0 4.4 1 23 1180 1202 1180 1202 0.99 17 21 3.3e-05 0.0024 19.4 4.7 2 23 1209 1230 1208 1230 0.96 18 21 0.00014 0.0099 17.5 0.4 3 23 1238 1258 1236 1258 0.96 19 21 0.0039 0.28 12.9 0.7 3 23 1266 1287 1265 1287 0.95 20 21 2.1e-06 0.00015 23.2 1.4 1 23 1293 1315 1293 1315 0.98 21 21 0.0017 0.12 14.0 0.8 2 23 1322 1344 1321 1344 0.94
Sequence Information
- Coding Sequence
- ATGAGCCATAATAGTGCTGTAGAAGAATTTGTCGAGTGCACATCTGTCGAACAGCATGTCGAGGTTGAGACGAGAACGGACTGCGATGAAACAAGAATCCAGGAGAATCTGCAGAAGATATTGGAAGGCGCGGAAGAGGCGGAAGAAATGCTGTCCAAAGAGGCGCTGCCTCTAATCTTCACGCCACCGCAGCTCTCTGCGTATCTCCAACCGCAGATGCAGTCGATCCCAGTCCCAGCGCCAACCATCTTACCCTACACATCAAGGTCGACGGAAGCTAAGATGTTTGCCGCTCAGCAGGCTTGGCTCTTGAGAGCGGCGCCAAATCTTGTGAATTCTGCCAATCTCGACCCTCCGTTTGGGACGATCATTGGCGCACAGTCGCAGATCTCGCTACAGGCCTCGAAGCTGCGATCTAAAGCCAAGGAGGAGTCAGGCTCGGGACCGACCAAGTGTCAGGAGTGCAGGGAATGGTTCTTCTCATACGAGAAGCTGACGATACACATGATCTCGAACCACGGTAAACATCACTGCAGCTACTGCAACGAAATGTTCGAAGCCGACGTCGAAAGAGAAGAGCACGAGAAGGTGAATCACTTCCCACTGGAATGTGACATCTGCAATTTGGCGGTTGATAATATGGATGAACATTACGAGGAGGTTCACGACATGAGGAACTGTCGGTTTTGTGGGGTTTTAGTCAAACCGAAGTCATACTACCAGATCCACGTGAGACGGAAGCACTACGTCAACTGTTTGGAGACGTTGGAAGAGAGGGACGTGCGGCTGGTTGGGAATTGGTCGGAAAACTCTGACGCGTGGAACTTTAACTGCCATTTGTGTGGCAAGGAGAGAAAGAGAGCCGACATCTTCGGTCACTTCTACTCGTACCACCGACTGAGCTTGCTGTGTTTCGTTGTGTTCCTTCGTACCGAGCAGATGTTGTTTACAGTACAGGGTACTCTAGCGCCGGCCGGCGTTCAAAAGCCTCCCGGCGATTCCATCGTAGAAGACTGTTCCAAGTCAGCTCAGTTAGTGACCTCCCACAATGTTCATTCAGATTGCACCGCATGTACAAAGCCCTTCACGTTCCAAGTGCCAAAACCAGCCCACGACATCTTCTGTCTTGGGCTCACGATCTGTCGCTACTGCAGTGCGACGTTCGCAGACGCCAACTCCCGAAACGCTCACATCTTAGCCGAGCACACAAACTTCCCCTGCACTCGGGGCTGTGATTCTACCTTCACGGAACTCGAACTCTCCCTTCACCACTCGGAAACCCACAGTGAGGTGTCGTGTCGATTCTGTGAAACATTTCTTCCCAATAACTTGTCTACTTTAGCCGACCATCTTCAGACGAAACATGCGACCTCGAGCCGAAGCAAGGCTCTGATAGACAAAGACATTGACCTAATCGTACCCAATGGTCACAGCTTCACTTGCTCCCTGTGTTCAGCCAACATTACTTCTTCTATGCATGACCTCCGTGCCTTGTCGAAGCATCTTCAGTACCACAACATCTCCCTAACAGCGATGCTAGCCCTCTTAGAATCACATCAACTCACTGCCACTTTCAAACCTACAAAGATTATTAAAAAAGCTGCCAAGACGCTAGACAGAAGACTTGTAGAGCGTAGTTCTAAGAAACCTGGTCACAAGAAGAGGTTGAAGTCTAAGAAGCTATCGGAAGGTCAGGAGCTTGACAGTTCTCGGACGGAAGAGAACGGATGCAATCGCGGCACCGTCATCATGGGCGTGAAGCCGCTCGACGACTCCGAGAACAACGGAGCTAGTTTCCACAACGCCGACTCTTCAAGCACGACGACCACAGAGGACGAGGAAGACTTCGAATCGTCGGACGACGAGAACAAAGAAGAGACGAAGCTGGACGTTTCCGTGAGCGACATGGGCGACGCGGAGATCGATCCGACGGAGATCGAATGCGTCATCAACGACACCTCCGACGACGAGGAATACGACGTGGAAGACTTGCTGCAAGTGTCGCAATTCGATATGCGAAGAGACGACGATCAGAATGCCGAAATGCAGGCGCTGGATTGTAACATCAAAGACGACTGTTTCCAGCAGAACTTCCGCGAGACGGTGGTGAAGCGAACGGGAGACAAGTGCTTGGACCTGATCGAGAGGACGATGGAGGACATCTTCCAGGACGCACCGAGACTGGGCCGGGTTGCGGTGGAAGTGAGGATCAACGAGGGAGTCGACGACAGTCTCGACCTCGAGCAAGGGGGCTCGGATTCCAAGGAGAACTCAAACGTCATGAATAACCACAGCTATGCGAATAACCATCACATGGAGAAAAACCACAGAGTGAAGTCCAAGAGCGACCGCCACATCCTCGAGGAGAGCGTGCGCAACATGAAGCCGGACCCGGACCAGCTGACCGCGCAGCAGGTGCTGGCGGCCATCTTCAAGTGCGAGCTGTGCGTCCCCGAGCAGAACACCACGCTCACCTCGGCCATCGAGTACGCCCGGCACATGCGCACGCATCACAAGTTCGCCATATCGGCCCACTGCTCGCAGAAGCAGCCCGCCGGCGGGGAGATCGACCTCGGCATTCTGGACCACGTCGACCAGGAGGGGATGCTGGACGAGGTGTTCGAGTGTCCGTTCTGCTCCATCAGGTCGATGTGGAAGACTGCAATCCGCCAGCACGTGTGGCGCACCCACGCGGCCGACTGCAGCAACCAGGCGCCGGTGGAGCGCCTGGCGTACGCCTGCCGCTACTGCGAGCTGCGCTTCTGGCGCGCCACCGAGCGCAACGAGCACCAGATCACCAGCCACGACGACCAGATCTACGACTTCTACAAGTGCTACGTCTGCTCGCAGATTTCCTCCAGCCGGTTGATGCTTCTGCGGCACATGAAGGTGTCCCACCCCGCGGAGCCGCAGTACTCGGCCGTGTCGTACAAGTGCAAGCTGTGTCTGCTGACGTACCCGAGCCTGGGGCTGCTGCGCGAGCACTTTGCCGCCACCCATCCCGCCGCCATGGTGTTCCCCTGCACGCACTGCAGCATCACGCTCAAGAACAAGACGACGCTGCGCTCGCACATCAAGAGCGTGCACGTGGACGGCTCGGACCGGCGGCGCGACTGCACGCTGTGCGGCAAGGTGCTCTACAGCAAGCGCGCGCAGGCGATCCACTACCGCATGAAGCACAGCCAGGCGTCCAAGGTCGGCTTCCGCTGCCGCATCTGTCAGCAGCGCTTCGACACCAAAGACGACCGCAAGATGCACTACGCAGTTGAGCACCAGGGGGAGTCACCGTACCACTGCACCGAGTGCGGCAAGGGATTCGCCTCCAAGTCTGGCATGTACGGACACAAGCAGCTACACACCGGCTCGGGCATCTCCAAGTGCCAGTACTGCGGCAAGGAGTTCACGCGCAAGGACAGCTACAACGAACACCTGCTGATCCACAACGGACCGCGCCACAAGTGTCCGCACTGTCCCAAGGAGTTCGTCCAGCGATCCAACCTCGTGCGGCACATCCGCATTCACACCGGTGAGAAGCCCTACAAGTGCGTGTACTGCGACAAGTGTTTCTCGGACAAGGGCGCGTGCAACTCTCACATCCGCGTGCACACGCGCGAGGAGACCTGCAGCTGTCCGTACTGCGGCCAGTCCTTCTCCAAGAAGCAGAAACTCAAGTACCACATCCGCAAGCACACGGGCGAAGGACTCATCAACTGTGAAGTCTGCAGCAAGTCGTTCACGAACAGCTTCGCGCTGAAGGAGCACCGTCTGATCCACAACCGCGAGACCTCCATCCTCTGCGGCACATGCGGCAAGGGATTCAACAGCGAGAAGTACCTGTCGAGACACCACGCCATCGTTCACGAGCCGCACCACACCTTCGTCTGTCCGCTTTGCTCAAAGACGTTCTCGCAGCAGTCTCGGCTCAAGTCCCACCTGATGACGCACACGGGCGTGAAGCACATGAAGTGCCTGCTGTGCGACAAGGCGTACTCGGTGCGCAAGTCCCTCCGCCGCCACCTGCTGGAGAAGCATCAGGTGGCGCCCGACCATCCGCAGTACCGACGCTGCTTCTACGCCATGACACACCAGGAAGCCGGCCTGCAGATACCCGAGGACATGTCGTTCTTCGCCTCGCTCGACGGCGACTCCAGTCACTCGTCTCCCAAGCACGACGAGGAGGTCGTCAAGCGGTCGCCGAGGAAGTCGGGGAAGAAGCCGGTCTACATCGAGCCGGAGGACGAGGTGGTcgtgaagaagaggaggaagaaggaGGAGAAGCCGTCGACGTCGAAGCCGGAGGACTCGGAATCCAGTTCGGAGACGTCGGAAGAGGAGGTGGTCGTCAAGAAGAAGGGGAAGAAGGGGATCTCGAACATCGTGGACCGGCTGCAGAAGCGGCTGGGGCCCGGGAAGCAGAAGCGACGGGTGGAGGAGATCGCAGAGACGCTGCAGAAGACGTCGCCGGCGGTGTCGAGCGACGACGAACCCGTCATGGCGAGGATGCACGCGCTCAACAGCAGTCCGAAGGGCAACCGACGCACCGAGCGGGCCGGAAGCAAACGGCCCGGCAAAGAGACCAGCTGA
- Protein Sequence
- MSHNSAVEEFVECTSVEQHVEVETRTDCDETRIQENLQKILEGAEEAEEMLSKEALPLIFTPPQLSAYLQPQMQSIPVPAPTILPYTSRSTEAKMFAAQQAWLLRAAPNLVNSANLDPPFGTIIGAQSQISLQASKLRSKAKEESGSGPTKCQECREWFFSYEKLTIHMISNHGKHHCSYCNEMFEADVEREEHEKVNHFPLECDICNLAVDNMDEHYEEVHDMRNCRFCGVLVKPKSYYQIHVRRKHYVNCLETLEERDVRLVGNWSENSDAWNFNCHLCGKERKRADIFGHFYSYHRLSLLCFVVFLRTEQMLFTVQGTLAPAGVQKPPGDSIVEDCSKSAQLVTSHNVHSDCTACTKPFTFQVPKPAHDIFCLGLTICRYCSATFADANSRNAHILAEHTNFPCTRGCDSTFTELELSLHHSETHSEVSCRFCETFLPNNLSTLADHLQTKHATSSRSKALIDKDIDLIVPNGHSFTCSLCSANITSSMHDLRALSKHLQYHNISLTAMLALLESHQLTATFKPTKIIKKAAKTLDRRLVERSSKKPGHKKRLKSKKLSEGQELDSSRTEENGCNRGTVIMGVKPLDDSENNGASFHNADSSSTTTTEDEEDFESSDDENKEETKLDVSVSDMGDAEIDPTEIECVINDTSDDEEYDVEDLLQVSQFDMRRDDDQNAEMQALDCNIKDDCFQQNFRETVVKRTGDKCLDLIERTMEDIFQDAPRLGRVAVEVRINEGVDDSLDLEQGGSDSKENSNVMNNHSYANNHHMEKNHRVKSKSDRHILEESVRNMKPDPDQLTAQQVLAAIFKCELCVPEQNTTLTSAIEYARHMRTHHKFAISAHCSQKQPAGGEIDLGILDHVDQEGMLDEVFECPFCSIRSMWKTAIRQHVWRTHAADCSNQAPVERLAYACRYCELRFWRATERNEHQITSHDDQIYDFYKCYVCSQISSSRLMLLRHMKVSHPAEPQYSAVSYKCKLCLLTYPSLGLLREHFAATHPAAMVFPCTHCSITLKNKTTLRSHIKSVHVDGSDRRRDCTLCGKVLYSKRAQAIHYRMKHSQASKVGFRCRICQQRFDTKDDRKMHYAVEHQGESPYHCTECGKGFASKSGMYGHKQLHTGSGISKCQYCGKEFTRKDSYNEHLLIHNGPRHKCPHCPKEFVQRSNLVRHIRIHTGEKPYKCVYCDKCFSDKGACNSHIRVHTREETCSCPYCGQSFSKKQKLKYHIRKHTGEGLINCEVCSKSFTNSFALKEHRLIHNRETSILCGTCGKGFNSEKYLSRHHAIVHEPHHTFVCPLCSKTFSQQSRLKSHLMTHTGVKHMKCLLCDKAYSVRKSLRRHLLEKHQVAPDHPQYRRCFYAMTHQEAGLQIPEDMSFFASLDGDSSHSSPKHDEEVVKRSPRKSGKKPVYIEPEDEVVVKKRRKKEEKPSTSKPEDSESSSETSEEEVVVKKKGKKGISNIVDRLQKRLGPGKQKRRVEEIAETLQKTSPAVSSDDEPVMARMHALNSSPKGNRRTERAGSKRPGKETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -