Basic Information

Insect: Leuctra nigra
Gene Symbol: Zfpm1
Assembly: GCA_934046545.1
Location: CAKOHC010002142.1:67356-82154[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.17 12 7.8 0.8 1 23 598 621 598 621 0.93

2 15 0.0029 0.21 13.3 1.7 1 23 657 679 657 679 0.96

3 15 0.00017 0.012 17.2 0.9 1 23 714 736 714 736 0.96

4 15 0.048 3.4 9.5 0.7 1 23 744 766 744 767 0.95

5 15 0.38 27 6.6 0.2 1 17 773 789 773 790 0.83

6 15 0.01 0.72 11.6 0.8 1 16 822 837 822 838 0.93

7 15 1.7e-05 0.0012 20.4 1.4 1 23 843 865 843 865 0.98

8 15 1.7e-05 0.0012 20.4 1.4 1 23 914 936 914 936 0.98

9 15 1.7e-05 0.0012 20.4 1.4 1 23 985 1007 985 1007 0.98

10 15 5.1e-06 0.00036 22.0 0.4 2 23 1016 1037 1015 1037 0.97

11 15 0.00014 0.0097 17.5 1.4 1 23 1043 1065 1043 1065 0.99

12 15 2.6e-05 0.0019 19.7 3.1 3 23 1073 1093 1072 1093 0.99

13 15 1.3e-06 9.4e-05 23.8 0.6 1 23 1099 1121 1099 1121 0.98

14 15 2.3e-05 0.0016 19.9 6.7 1 23 1127 1149 1127 1149 0.98

15 15 6.2e-05 0.0044 18.6 2.3 1 21 1155 1175 1155 1176 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.17	12	7.8	0.8	1	23	598	621	598	621	0.93
2	15	0.0029	0.21	13.3	1.7	1	23	657	679	657	679	0.96
3	15	0.00017	0.012	17.2	0.9	1	23	714	736	714	736	0.96
4	15	0.048	3.4	9.5	0.7	1	23	744	766	744	767	0.95
5	15	0.38	27	6.6	0.2	1	17	773	789	773	790	0.83
6	15	0.01	0.72	11.6	0.8	1	16	822	837	822	838	0.93
7	15	1.7e-05	0.0012	20.4	1.4	1	23	843	865	843	865	0.98
8	15	1.7e-05	0.0012	20.4	1.4	1	23	914	936	914	936	0.98
9	15	1.7e-05	0.0012	20.4	1.4	1	23	985	1007	985	1007	0.98
10	15	5.1e-06	0.00036	22.0	0.4	2	23	1016	1037	1015	1037	0.97
11	15	0.00014	0.0097	17.5	1.4	1	23	1043	1065	1043	1065	0.99
12	15	2.6e-05	0.0019	19.7	3.1	3	23	1073	1093	1072	1093	0.99
13	15	1.3e-06	9.4e-05	23.8	0.6	1	23	1099	1121	1099	1121	0.98
14	15	2.3e-05	0.0016	19.9	6.7	1	23	1127	1149	1127	1149	0.98
15	15	6.2e-05	0.0044	18.6	2.3	1	21	1155	1175	1155	1176	0.95

Sequence Information

Coding Sequence: ATGGTTCGCTTCTGTGTGTTGGTACGTCTGACTCGATCTGACAGACAGTTGAAGCTGCTGCTGACGCACCCCAGCGACGACCACGTGACCCTGATCGTCGACGGCGTCCACGCCGAGGACATGGCCGCCATCCTCGTGTTCGCCTACACCGGCCAGGTGTCCGTCGACAAGCGTCGCTTCCCGCGCTTCCTTCGCGCCGCCGCCCTCCTCGACATCGAGATCCTCAACCCGCCGCGGCCGCACGACGAGGACGACTTCAAGACCAAGCTGATGAAGCTCGAACAGGAGGCGACGAACTATCTGGACAGCTGCGCCGATCTGCCGCGCGAGAGCTTCCTGGAGAGCATGCGCCGCGCGAGGGACTACGTCGAGAGGAAGATGACCAAGTACGAGGAGGAGGCGCGGATCAAGTACGACGAGAGACAGACGCGGGGGAAGCGACGCGACGAGGACGACGTCACCGAGATCCTCAACAACCTCCCCGGCATGTCGATCTCCAAGGTCAGAGTCGAGGCGGAGAAGCGGCGAGCCTCGACGAGCTCCCGGCAAGAGGACGTTGCCAAGAGGATGAGAAGCGAGACGGAGAGCGCGTTCCGACCTGTTGAGAAGACGCGAGGCTTGGCGCGAGTCAAGCCGCTGCCGCTGCTCATGCCGATCACGGCCCCGCAGAAGCAGGCGAAACTGTCGCCGCCTCTCCCGCCGGTACCGCGGCCGCAGAAGAACTGGCGCCCCGTCGAGATCCCCTCGGACGACGACGAGGACGACCAGTCGGGGGGCAAACTCTTCGACGAGCAGCCCAGAGATCTGTCCACGAGGAAGGTCGTCGACGACGACGTGGAGATCGTCCAGGAGACGCGCGCGGTACAGAGGGTCGGGTACAACGACGCGTCCGGTGTCGTTCACGACTACTCCAACGCCAAGCTCGTCGACCACAACTCCAACTGTTACAAGTACAACGGGGACGTCGGCAAGCTGAACATCCTGCACCGCATCCTCGAGGAGACGAACCACAAGGCGTCGCTCAGCGCCGCGAGCAAGACGACGCCGATCAACCCGTACCAGATCACGTTCGGCAACCGCCAGAAGGTCGCCGCCAAGGAGGTGGAGAGAGTGAGCGAGGCGCCGGCGAGGAGTCCAAGTGGCAGCGACGCGATGTTTTACGCGGCGGACACGGCCACCAAGAGTCCGGCTCAGGGAAAGACAGCATTAATCTGTTGCAAGAGGTTGTTCCCTCAGACATCGGGTTTCAGCTCACACTTTCAAGCGGCCAACGGGATGATGACGCACGAGAACGGCCTCAAGAACATGCCTCACAGAGAGTTTGTATCGAACTGTCATTTGACGCCGGCTTCTCAGGGAAAGAATTCGACGGAAGTTCCGCAGATCTTCGCTCAGCCCAAGGAGCGTGCTTTGAATCGGCATTTCACGCACGAGGCGTCTTCCAAGGTCACGGAGGCGGAGAAGTGTCTGACGAGCGTGATCGTGGCGGCGCCGTTCCCGAGCTTCGAGCGTCACTTCCTGGCGGAGGCGACGTCGAATAGCGAGCTGAAGTTCTCTGACGTCGCCGTCAAGGGCAATGGGGCGAAGCAGTTCCAAGACGTCGTCGCCAAGGGCAAGGCGGAGCGACTCCACTTCCCCGACGTCCCCGTCAAGAGTGCGGCGAGCAACGGGACGAAGGCGGTCGACGTGAAGGAGGCGGCGTTCTTGTCGGATCCTCCGGCGCCGGCGCAAGAGGGTGCTCCGTCGCTTGGCAACAGCCTGCTGAACCTGGCACTGCGCGGGGCGCCGTCGCACGACTGCGGCGAGTGCGGGCAACAACTGTTCCCTCGGCGTCAGCTCCTCGTGCAGCACCAGCGCTCCCACACTAGCGGCGGCGCCAAGCAGTACTACTACTGTGTCGAGTGCATTGTTATCGAGCTTGTTCCCTCCTTCAGCCTGCTCAACCTGGCACTACGCGGGGCGCCGTCACACGACTGCGGCGAGTGCAGGCAACAGTTCCCTCGGCGTCAGCTCCTCGTGCAGCACCAGCGCTCCCACACTAGCGGCGGCGCCAAGCAGTACTACTGTGTCGAGTGCATTGTTATCGAGCTTGTTCCCTCCTTCAGCCTGCTCAACCTGGCACTGCGCGGGGCGCCGTCACACGACTGCGGCGAGTGCGGGCAACAGTTCCCTCGGCGTCAGCTCCTCGTGCAGCACCAGCGCTCCCACACTAGCGGCGGCGCGAAGCAGTACTACTGTGTCGAGTGCAGCGAGCAGTTCGCCCAGCGCGCACCCTTCGTCGCGCATCGCAAGCTCCACCATCCCGCCAGCACGGAGCACGCCTGCCAACACTGCGACAAGGTGTTCCTCACCAGGGCATCGCTCAAGTCTCTCTGGCGCAACAGGCAAGCCAGTTATGCTATCCCTACTAATGCGTATCTGGTGGCACAGGTGCACGTGCGCGCGCACAGCGGCGTGAAGCCCTACCAGTGTCCCGACTGCAGCAAGGAGTTCTCGCAGCTGCGCAACTTCAACGGCGTGAAGCCCTACCAGTGTCCCGACTGCAGCAAGGAGTTCTCGCAGCTGCGCAACTTCAAGTACCACCTGTCCATCCACGCGGGTGCCAATGTGTTATCTGATACAGGTGCACGTGCGCGCGCACAGCGGGGTGAAGCCCTACCAGTGTCCCGACTGCAGCAAGGAGTTCTCGCAGCTGCGCAACTTCAAGTGCATGTGCGCGCGCACAGCGGCGTGAAGCCCTACCAGTGTCCCGACTGCAGCAAGGAGTTCTCGCAGCTGCGCAACTTCAAGTACCACCTGTCCATCCACGCGGGTACCAATGTGTTATCTGATACAGGTGCACGTGCGCGCGCACAGCGGCGTGAAGCCCTACCAGTGTCCCGACTGCAGCAAGGAGTTCTCGCAGCTGCGCAACTTCAAGTGCACGTGCGCGCGCACAGCGGCGTGAAGCCCTACCAGTGTCCCGACTGCAGCAAGGAGTTCTCGCAGCTGCGCAACTTCAAGTACCACCTGTCGATCCACGCGGGTACCAACGAGTTCAGCACCACGTGTCCGGAGTGCGGCAAGTACTTCAACGACCGCGGCTATCTGTCCTCGCACATGAAGATCCATCTCAACCGCAAGGAGTACAAGTGTCAGTTCTGCGAGAAGAGCTTCAACCAGCGCGTGGCGTACAACATGCATGTGCGCATCCACACTGGCGTGAAGCCGCACGGCTGCGTCCACTGCAGCAAGAGCTTCAGCAGGAAGATGTTGCTCAAGCAGCACATGCGCATACATACGGGCGAGCGGCCGTTCACATGCAACATTTGTAACAAGGCGTTCGCCGACCGGAGCAACatgtctctgcacatgcgcctGCACAGCGGCATCAAGCCGTACACATGCGCAGTGTGCGACAAGAGCTTCACCAAGAAGCACCACCTGAAGACGCACATGAACTTCCACATGGGCGTCAAGCCGTACTCCTGCGACAAGTGCGGCCTCACGTTCAGCCAGTCCAGCAACATGCGCACGCACCACAAGCGCTGCAGCGTCGGCGACCAGTCGGCAGAGCAGTCGGCCAAGTAG
Protein Sequence: MVRFCVLVRLTRSDRQLKLLLTHPSDDHVTLIVDGVHAEDMAAILVFAYTGQVSVDKRRFPRFLRAAALLDIEILNPPRPHDEDDFKTKLMKLEQEATNYLDSCADLPRESFLESMRRARDYVERKMTKYEEEARIKYDERQTRGKRRDEDDVTEILNNLPGMSISKVRVEAEKRRASTSSRQEDVAKRMRSETESAFRPVEKTRGLARVKPLPLLMPITAPQKQAKLSPPLPPVPRPQKNWRPVEIPSDDDEDDQSGGKLFDEQPRDLSTRKVVDDDVEIVQETRAVQRVGYNDASGVVHDYSNAKLVDHNSNCYKYNGDVGKLNILHRILEETNHKASLSAASKTTPINPYQITFGNRQKVAAKEVERVSEAPARSPSGSDAMFYAADTATKSPAQGKTALICCKRLFPQTSGFSSHFQAANGMMTHENGLKNMPHREFVSNCHLTPASQGKNSTEVPQIFAQPKERALNRHFTHEASSKVTEAEKCLTSVIVAAPFPSFERHFLAEATSNSELKFSDVAVKGNGAKQFQDVVAKGKAERLHFPDVPVKSAASNGTKAVDVKEAAFLSDPPAPAQEGAPSLGNSLLNLALRGAPSHDCGECGQQLFPRRQLLVQHQRSHTSGGAKQYYYCVECIVIELVPSFSLLNLALRGAPSHDCGECRQQFPRRQLLVQHQRSHTSGGAKQYYCVECIVIELVPSFSLLNLALRGAPSHDCGECGQQFPRRQLLVQHQRSHTSGGAKQYYCVECSEQFAQRAPFVAHRKLHHPASTEHACQHCDKVFLTRASLKSLWRNRQASYAIPTNAYLVAQVHVRAHSGVKPYQCPDCSKEFSQLRNFNGVKPYQCPDCSKEFSQLRNFKYHLSIHAGANVLSDTGARARAQRGEALPVSRLQQGVLAAAQLQVHVRAHSGVKPYQCPDCSKEFSQLRNFKYHLSIHAGTNVLSDTGARARAQRREALPVSRLQQGVLAAAQLQVHVRAHSGVKPYQCPDCSKEFSQLRNFKYHLSIHAGTNEFSTTCPECGKYFNDRGYLSSHMKIHLNRKEYKCQFCEKSFNQRVAYNMHVRIHTGVKPHGCVHCSKSFSRKMLLKQHMRIHTGERPFTCNICNKAFADRSNMSLHMRLHSGIKPYTCAVCDKSFTKKHHLKTHMNFHMGVKPYSCDKCGLTFSQSSNMRTHHKRCSVGDQSAEQSAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -