Lnig031665.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- -
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010003611.1:42671-43914[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0082 14 7.1 0.0 8 24 20 36 17 37 0.92 2 4 0.004 6.8 8.1 0.0 8 24 113 129 110 130 0.92 3 4 0.0044 7.3 8.0 0.0 8 24 206 222 203 223 0.92 4 4 0.019 32 5.9 0.0 9 24 326 341 323 342 0.91
Sequence Information
- Coding Sequence
- ATGGACGACGAGACAGGCCAGATGGACTTGCCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCGAATACTTATTGTCTTGGTGGACGAATGTGGACGAAGATGGACGACAAGACACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCGAATACCTATTGTCTTGGTGGACGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCGAATACTTATTGTCTTGGTGGACGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCGAATACTTATTGTCTTGGTGGACGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCTAATACTTATTGTCTTGGTGGACGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCGAATACTTATTGTCTTGGTGGACGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGACGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTCAGGATCTAATACTTATTGTCTTGGTGGCCGAATGTGGAGGAAGATGGACGACAAGGCACGCCAGATGTACTACGACTTGGCGGACATTGCCAGGAGGAAGCAAGGTGAGGATCTAA
- Protein Sequence
- MDDETGQMDLPDIARRKQGEDRILIVLVDECGRRWTTRHARCTTTWRTLPGGSKVRIEYLLSWWTNVEEDGRQGTPDVLRLGGHCQEEARKMDDKARQMYYDLADIARRKQGEDRILIVLVDECGGRWTTRHARCTTTWRTLPGGSKVRIEYLLSWWTNVEEDGRQGTPDVLRLGGHCQEEARKMDDKARQMYYDLADIARRKQGEDLILIVLVDECGGRWTTRHARCTTTWRTLPGGSKVRIEYLLSWWTNVEEDGRQGTPDVLRLGGHCQEEARTNVEEDGRQGTPDVLRLGGHCQEEARKMDDKARQMYYDLADIARRKQGQDLILIVLVAECGGRWTTRHARCTTTWRTLPGGSKVRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -