Lnig024497.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- dnajc2
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010002385.1:113072-114823[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-07 0.0013 20.0 0.0 3 41 419 467 417 471 0.81 2 2 9.9e-13 1.7e-09 38.8 0.2 3 44 519 564 518 566 0.92
Sequence Information
- Coding Sequence
- ATGGTCGAGTGTGTGGGTCCATACTTTCTGACTTTCTGGCAAACTCAACCGGGAGTGGCAAATGATTCGCTTGACGTTCAAAGTGAAGCTGAATCGGAGGACGACATCGGAACAACACTATTTGATGATGACGATGTAGAATTCCTTCGTAGTTTAGATCCTAAGGATTGGAAGGAACAAGATCATTATGCCGTAATCGGGCTTGTAAAACTGAGACATAAAGCTACTGAAGAAGACATCAAGAAGGCCTATCGACTGAAGGTTTTGCGTCATCATCCTGACAAGCGCAAGGGCCTGGGAGAAGAGATCCGTACTGATGATGATTACTTCACTTGCATAACTCGAGCCTGGGAGATCCTTGGGAACCCGCGCCTTCGTCGGTCTTACGATTCCGTCGATCCTTTGTTCGACGATGACCTACCAGAGAATAATGAATACTCGCGGAAGAATTTCTATGAAGTCTACGGCAAATGTTTTGAATTGAATTCACGTTGGTCCGAGAAGAAGCCCGTCCCGAAGCTCGGCGGTCCGAACTCGTCCCGCGATCAAGTCGAGAAGTTTTACGCCTTCTGGTACAACTTTGAGTCGTGGCGGGAATATTCTTATAATGACGAGGAGGAGAAGGACAAAGCTTCAGCTCGTGACGAGCGTCGATACATCGACAAGTTGAACAAAGCCGCGAGGATTAAGATGAAGAGACAAGAGATGACTAGAATCCGCACTCTGGTCGATACGGCTTACCAGTTGGACCCTCGCATAGCACAGATCCGGCAAGACGAGAAGGACCGTAAGTTGGCAATCAAACAAGCGAAGAAAGACACAGCGAGAGCTCGGCAAGAGGAGATCGAAAGAAAGCAGCAGGAAGTGGAAGCGATCGCTCGCAAAGCCAAAGAAGAAGCGGAAGCAGAGGAGAAGGCAAAACAGGAGGTGATAAAAGCAGAACAAAACGCTCAGAAACGCGCAATGAAATCTACGAGAATGGCTTTAAGGAAGATCGTGAAGAGTAACGAGTATTACGCGTCAGAGCCCAATGAAACTATTCGGCACATGTCAAGTCTCGAGAAGATCTGCGAATCTTTCCGCATCGAAGAGCTGTCTACTCTCGTGGCCTCACTTCAAGCCGACGGACGGGAAGCCTTCATAGCCGGAATGGTCGAAGCAGAGCGTCGTATCGAAGAGGAACGTCAACAGCTGATGGAGAAAGCAACGATGTCGAAACCGTCCTCGCTGGAGAAAGTGAAGGCTGGTACTGCCCCCTGGTCTCAAGAGCAACACCAAACGTTGATAAAAGCCGTGAATCTCTTCCCGGCCGGCACTAACCAACGCTGGGACGTCGTCGCTAACTTCATCAACCAACATCATCCGGAGGTGACGAGGACTTGTAAAGAAGTTCTGAGTCGAGCGAAAGACCTTCAGAGCGGCGGCGATCACTCGATGAAAGCAGCCGTCAACCGAAACGCTTATGGCAACTTCGAGAAGGACCAGAAGGGCATGACGGTGATGGCGACGACGTCGGAACGGTTCGATAGCGCGGCGGAACAACAGGGACTGGTGCCGTGGACCGCGGAGGAGCAGAAGCTGCTGGAGCAAGCGTTGAAGACGTATCCCGTGACGACGGAAGAGCGATGGGAAAAGATAGCGTCATGCGTCACGGGAAGAACCAAGCGGGACTGTATGAAGCGGTACAAGGAGCTAGCGGAGATGGTCAAGGCAAAGAAAGCGGCTCAGGCAGCGGTCACGACTAAGAAATAA
- Protein Sequence
- MVECVGPYFLTFWQTQPGVANDSLDVQSEAESEDDIGTTLFDDDDVEFLRSLDPKDWKEQDHYAVIGLVKLRHKATEEDIKKAYRLKVLRHHPDKRKGLGEEIRTDDDYFTCITRAWEILGNPRLRRSYDSVDPLFDDDLPENNEYSRKNFYEVYGKCFELNSRWSEKKPVPKLGGPNSSRDQVEKFYAFWYNFESWREYSYNDEEEKDKASARDERRYIDKLNKAARIKMKRQEMTRIRTLVDTAYQLDPRIAQIRQDEKDRKLAIKQAKKDTARARQEEIERKQQEVEAIARKAKEEAEAEEKAKQEVIKAEQNAQKRAMKSTRMALRKIVKSNEYYASEPNETIRHMSSLEKICESFRIEELSTLVASLQADGREAFIAGMVEAERRIEEERQQLMEKATMSKPSSLEKVKAGTAPWSQEQHQTLIKAVNLFPAGTNQRWDVVANFINQHHPEVTRTCKEVLSRAKDLQSGGDHSMKAAVNRNAYGNFEKDQKGMTVMATTSERFDSAAEQQGLVPWTAEEQKLLEQALKTYPVTTEERWEKIASCVTGRTKRDCMKRYKELAEMVKAKKAAQAAVTTKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -