Lnig029047.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- Mblk-1
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010003113.1:11791-27802[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 9.2e-15 55.3 0.1 1 45 231 276 231 276 0.96 2 2 4.3e-18 3.4e-15 56.7 0.0 1 43 559 602 559 604 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGTTCGTTTTCACGTTGCGTGCAGGAGCGCAGACATATCAAAAAAGAGCTGCAAAGATGGACGAAGAATATGACATTCGTAGTAGGCTTGGAACGCGTAGCTGAGGAGTTGATGGGCCGTCGGAAGTGGAAGCAATGTCAACATGTCGCATCGAGCCGCCTAGATCTTCCGCAGCTCTCCGTGGACATCGAGACCAAAGACTGGACGCCCGTGGACAAGTGCTGCCTGTGCAATGAGCCCACGTTCCTAGACCGACCGCCGAGTCCCGGTTCGGATCAGGATAGTACTAGCAACGAGAGTGCATACCGAGAGTCTCCCCCCTCCACCCCGCCCCCCGCCCCCGCGATGACCACCTTCGAGTCCGTGAAGCTGGCCGCGCTGGCGGCGCTCACTCACGGGGACGCGCCGCCACCGCCTCCGCCCAACATGTTCTACCCGCCCGGCCACTTCTCCCCGTGGTACCTGGCGCCCTCGTTGCCGCCACACCACATCGTGCAGCGGCAGCGGCCGCCGGAGGTCGCGCCGCCGGAAGTCGTCAGCGCGGAGATGCCGCTCGACCTGAGCAGCGCGAGCAGACAGCCGGCGCGACCCGCGCTGCCCGGCTTGCCGCAAAGCATGGACCACAAACAAATATACAAGGCGAAGCCGCGCATGTCCGCGGTGTCTGGCCGCCGCACGTACACCGAGGACGAACTCCAAGCCGCTCTGCGCGACATCCAGTCCGGGAAGTTAGGCACTCGCCGCGCGGCCGTCATCTACGGCATCCCGCGCTCGACGCTGCGCAACAAGGTCTACAAGCTCGCAATGGAGCGCGAACGAGACGCGCAACTCCTCCTCAATGCGCCGCCGGTGGTCAAAGTCGACGACGACGACAAAGACAACTCGGGAGCGGAGGAGGAGCGGGAAGTGGAGAAGGCGTTGCAAAAGCCGCTCCTCTCCATGGAGGATTTGGTGAGGTTCTCCATGCTGGAATCCAACGGACTTGCGAATACGGAGGCGATGAGAACGCTGCTGCAGCAGCAGGGGAAGCCGTTCCCCCCCGGGGATGTGTGGGGCGGGTTGGAGCACAGCGCGCTGGGCCCCTACATCTCCACGCTGCTCGCCGCCAAGTCACAGGAGCAGGCCGACTTCCTCCCGAAGCCTCCTCCGCTCCTCCCCGACCTTGTCCGGCGCATGATGGCGGAGGAGAAGATGATGGAGGAGCACTTGAAGCGGACAAACAACAACGGGCCGGAGTTACGAGAAGAACCTTCGTCCGACGCCGAAGCAACGACATCCAATGTGATACTGAAGATTCCGTCCTTTAAGCCGACGTCGAAGAACGGAGAGCCGAGTCCGTCTGAGTCGTCTAGTCAGCCGTTCAACGGGGACTCGAGATCTCCACCAAGCATGACGGGGAAGGGCATCGGAGTGAGTCTCAGAGACGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGACGGAGGGTCCAATGCCGCTGGCGCAGAAGCTGCTCATGTCCCCGGAAGCAGACTCGCAACACAAGCGGGGCCGCTTCAGTCCGCCCCACTCTGTCATcaaacacaacaacaacaaccacCACATGGACGACCGCAATGCGCAGAAGACAATGTCGATGTCGGGCGGCAAGGGGACGCGGCCCAAGCGCGGGAAGTATCGGAACTACGACCGTGACAGCCTGGTAGAGGCGGTACGCGCCGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCTGGCTCGTATTATGGCGTACCCCATTCCACGCTGGAGTACAAGGTCAAGGAGCGGCATCTCATGCGACCGAGGAAGCGGGACCCCAAGCCGCAACCGGACGACCTCATGCGAAAAGACGAGAGACCCGGTCTTGGACCGCCCAAGATGATGAAGCCTCAGTACCCGACGAGTCCGATGCAGAACCCGCCCAACGGCTTGAAGATCCCGCCGATGTTCGATCCAGCGATGTCGCCACTGGCATACTCCACGACGCCGCCCTTCCCCTTCTGGCCTCCGAATCCCTTCCACTCCATGCCCATGCCGGACTTCCCTCGGCCCAACCCTCACGAGCAGTTCATTGCCTCGCAGATGATGCAAAGACTTCACGAAGAGTCTTCTCGCGTCCCGCCCCACCCACCCGAGCCACCTCTAGGCAAGAGCGCTCGCAAGATCGCCGAGAGCTTGTACGACGGGACCGGAACCAACGGCACCTTCTTGGACGGCATCATCCGGTCGAGCCTCGACATGGGTCTGCCGAAAGACAGCACGGCGCCTGAGAACCTGTCCAACAAGGCGCTGCTCGACCAGCTGTGTCGGAACAGTCGCATAACGCCGCTCCCCGTGCACGACGGCTCGAGTTCGGACGAGGACTCTGTCAAGCGGTCGTCCACGTTCGGCAAAGACGACTCCGAGCGAAACATGGACTTCTCGCCGTCTTCTGAAGAGTCAAACAGCAGGCGGAGAAAACTCACCGACAACCCGGACGATGATTTCTACGCGAAATCACCGAAACAAAACTTTTCGGACAATGATTCTCCGTCGAAGGATTCCAACGATGAATCCTCTGACAACGAGGAAGATCGAATTGACGAGGAAAGTGCCTGTGATAGTAAACAAGATTTACAGAAGAGAGACGATGAAACTGCCAAAGACAGAGACGAGAAAGAACCGGAAGAGAAGGAAGATCAGGCGACGGATACCAAATCAAACTTAAACTCATAA
- Protein Sequence
- MAECSFSRCVQERRHIKKELQRWTKNMTFVVGLERVAEELMGRRKWKQCQHVASSRLDLPQLSVDIETKDWTPVDKCCLCNEPTFLDRPPSPGSDQDSTSNESAYRESPPSTPPPAPAMTTFESVKLAALAALTHGDAPPPPPPNMFYPPGHFSPWYLAPSLPPHHIVQRQRPPEVAPPEVVSAEMPLDLSSASRQPARPALPGLPQSMDHKQIYKAKPRMSAVSGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDAQLLLNAPPVVKVDDDDKDNSGAEEEREVEKALQKPLLSMEDLVRFSMLESNGLANTEAMRTLLQQQGKPFPPGDVWGGLEHSALGPYISTLLAAKSQEQADFLPKPPPLLPDLVRRMMAEEKMMEEHLKRTNNNGPELREEPSSDAEATTSNVILKIPSFKPTSKNGEPSPSESSSQPFNGDSRSPPSMTGKGIGVSLRDVIAKSISQKFQTEGPMPLAQKLLMSPEADSQHKRGRFSPPHSVIKHNNNNHHMDDRNAQKTMSMSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPQPDDLMRKDERPGLGPPKMMKPQYPTSPMQNPPNGLKIPPMFDPAMSPLAYSTTPPFPFWPPNPFHSMPMPDFPRPNPHEQFIASQMMQRLHEESSRVPPHPPEPPLGKSARKIAESLYDGTGTNGTFLDGIIRSSLDMGLPKDSTAPENLSNKALLDQLCRNSRITPLPVHDGSSSDEDSVKRSSTFGKDDSERNMDFSPSSEESNSRRRKLTDNPDDDFYAKSPKQNFSDNDSPSKDSNDESSDNEEDRIDEESACDSKQDLQKRDDETAKDRDEKEPEEKEDQATDTKSNLNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -