Lnig034942.2
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- ct
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010004424.1:5613-22817[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.4e-27 8.8e-23 81.3 0.0 2 71 378 448 377 454 0.94 2 3 2.7e-31 2.8e-27 95.7 0.0 3 77 785 860 783 862 0.96 3 3 5e-31 5.3e-27 94.8 0.0 3 75 991 1064 989 1068 0.95
Sequence Information
- Coding Sequence
- ATGCTTCTCGAGACTAAAGTGTTTCTCCTGATGTTGTTCCCCTGGACTAACGTGTGCTGTCTCTTGCGGTTGCAGATCTGTCAGCTGGTGGAGGACGTGCAGCGGCTGCAGTCGAGCGTCAGCAAGCTTCAGGAGAACTCCGCCACGCAGATCGCCCGGCTCGAGGAGCAGCTAGACCACAAGCGACAGCACATCACCCGGATAGAGCAGCGACTGGACGCTCAGCGCGACTACGACGACCTCAAGCGGGAGCTAGCgaTCCTGCGCTCGCTGGACTTCGCCTCCATGGGCGCAGCAGTGAACAGCGCCGACGCCCCGGCCAAGGCGCTGGACTTGCTGCTCATAGAGCGCAGCAAAGCGCTGCAGCAGCAACACGCCGAGTCCAACGGACCCAAGTCCGTCTCCAGTTGCTCAGATCTTCCAGGTGTAACCACAACAACCACGACCACCACAACAACCCCATCTCTCCACCACCTCACCGACACCCCGACCCCCATCGACCACCCCCCGCCGCCGCCACCGCCCCCACTGCCTCCACCCCTGTTCCCCGCCCCCCTGCAGAACGTGGAGACCTTCGGCTCGTTCCTCGGTGAGGAGATCGTCGCCAACTGGCGTCGCTCTCTCGAGCGTTCGATCCTGAGTCAGAACCACGCGCTCCAAGCGAATCACTTACAAGCAATGCCCTCCCCCACAGAGGAGGCGTCGACGCCCCACGACGACGCCGTCAAGGAGGTGACCTCGCCGTGCACGACCTCGTCGCCGACGTCGTTCATCAACACGACGCCCACCATATCATCTCCGCTCGCCGGCAACGGAGACATCTACAACCATCACCTCATGAACGGCAACCCGAAGACGCCGGAAGATtccaatgttttgtgcaacaacaacaataaccacttgaacaataacaatatgtcgacgccgccgacgccagTGCCGGGACCTTTAAGTTTCTTCCGCGACGTCGACATCAAATCCCCTTTCCGTTTCGACGACCCGCGATCCCCGTTTCGGTTCGCGGACGAAGGCGTGATGGTGGGCCGCCTGGGGGACTCGTTGATACCGAAGGGCGATCCTATGGAGGCGCGGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCGTCGCAGAACCTCGACACGCTGCACATATCGCGACGCGTGCGCGAGCTCTTGTCCATCAACAACATCGGACAGCGGCTGTTCGCCAAGTACGTGTTGGGCCTCTCGCAGGGCACCGTGTCCGAGCTCCTCTCCAAGCCCAAGCCCTGGGACAAGTTGACGGAGAAGGGCAGGGATAGTTACCGCAAGATGCACGCGTGGGGATGTGACGAGAACGCCGTCATGCTGCTCAAGTCGCTCATTCCGAAGAAGGGCAAGGACACGGGCATCCCGGCGTTCGGCAGGGACCCGGACAACATGTCCGAGGAGAGGATCGCGCACATCCTGAACGAGGCGAGTCATCTGATGAAGAACCAAGTGGAGGACAGTCGCAGCAACGACAGCAAGTCTCCGTCGCACAACCAGTGTCCCTCGCCGATGGGCAAGGACGGATCTCAGAACCGGCGTCTGAAGAAGTACGAGAACGATGACATTCCACAGGAGAAGGTCGTGCGCATCTACCAAGAGGAGCTCGCCAAGCTCATGGGGAGGCGGATGGAGGATTCGATCCGGGGACCTCGGGAACACTTCCCCAGTAGTCTGTTGTTTCCCCACTTCTTCGGTAGCGGCGGCGGAAACGTACCGCTCGGCGTCGGCCGGGAGGACGAGATCCGAGTCGCGTTGGACGCTTACCACCGAGAGTTGGCCAAGCTCAACACTTGTCCGACCAGGGCCGTCATGCCCGCGGGCCTTCCGGGGCTGCCCGGGGGCTTACCGGGGCTGCTGGCATTGCAGCAACAGCATAATGTGCAGATGAACGGAGTGGACCTGTCGCTGCCGAAGGAGCGACGAGACTCCTCGGCCAGTAAGATGTGCAACGGAGACCTCGACGACGAGAGATGCAAGAAGGATCCGACGCCGTCAGGTCTGGAAGCAGTCGCGGACGTGTTGCGACACGTCGGCAGTGCTTTCTCACTTGTCAGACCAAAGATTGAGCCAGGTGTTGGCGTTCCTACATCCACCACCGGCAGCAGCGGCAGCAGTCCCCTCGGCAACACGATACTTCCGCCGGCGCTGGAAGACTTCACCTCGTCGGGCCCCGCTTCCGCTTCCCCCCTCCAACGCATGGCGTCCATTACCAACTCCCTGATCTCACAGCCCAGTTCCACTCCCCACCACTCCCCCTCGCAGCGGCCGCTGAAAGCAGTGCTGCCGCCCATCACGCAGCAACAGTTTGACAACTTCAACAACCTCAACACGGAAGATATCGTGAAAAAGGTGAAGGAATCGCTAAGTCAATACTCGATCAGCCAGCGTCTGTTTGGCGAATCGGTTCTCGGCTTATCTCAGGGCTCCGTGTCTGACTTGCTGGCTCGGCCGAAGCCGTGGCACATGTTGACGCAGAAGGGTCGCGAGCCGTTCATCCGCATGAAGATGTACCTCGAGGACGACAACGCGGTGCACAAACTCGTCGCGTCGCAGTACAAGATCGCGCCCGAGAAGCTCATGCGGACGGGCAGCTACGCGGGTGGACCAGCGTGCCCGGTCCAGCTGCCGAAGCAAAACCAACAGCAACCTCAGCAGAAGTTTCCCTCCTGTAACGATCTACCTCGTTCCGACAAGTTCGAGAACTCCCTCCTCCCTCCCTCGCTACAACTCCCCTGCCCGCCCCCCGTCCCGCACCACCACCCCCAGACCTCCCCGCTGTCTTCACAGTCCGCGCCGCCCCACCTCACCCACACGCCGCACTCGCAAGAGAAGAAACCCACCAATCAGCTGCTGCACACGCATCAACAGTCCGCGGCGCTTCGGGCGCTGCAACAACATGTGGCGCCGAGCGTCTACGAGATGGCGGCGCTCACGCAAGATCTCGACACACAGACCATCACTACCAAGATCAAAGAGGCGCTGCTGGCAAACAACATTGGGCAAAAGATCTTCGGCGAGGCCGTACTCGGCTTGTCTCAGGGCTCTGTGAGCGAGCTGCTCTCCAAGCCGAAGCCGTGGCACATGCTGAGCATCAAGGGCCGAGAGCCGTTCATCCGCATGCAGCTGTGGCTCAGCGACAGTCACAACATCGACCGTCTGCAGGCGTTGAAGAACGAACGTCGCGAGGCGAACAAACGTCGTCGAAGTCACCAAGACAACGGCAGCGACACTTCTTCCAACGACACCTCCGAGTTCTACCACAGTCCGAGTCCGGGTCCGCCTTCCGCCAAGAAGCAACGAGTTCTCTTCTCCGAAGAGCAGAAAGAAGCGTTGCGACTCGCGTTTGCGCTTGACTCTTATCCGAACGTCGCAACCATCGAGTTCCTCGGTTCCGAGCTCGCTTTGTCGTCGCGAACGATCACAAACTGGTTCCACAACCATCGTATGCGATTAAAACAGCAAACCCCTCACGACAGCACACCTGGAAGTCGCGACGGCAGCACCGGAGGTCAGCCCTTCGACCCAGTGCAGTTCCGTATGTTGCTCAACCAGCGGTTGCTTGAGCTGCAGAAAGAGCGCATGGGTCTCGGCGCCGTACCACTTCCGTATCCTCCGTACTTCAACAACAACCTCGCTGCCCTGATCGCGAGTCGAGGCATGTTGCCCGACATGAAGGAGCAGTTCTCCGGGTTGGATCTCAGCATGGGCGGCCTGAAGCGCGAGCCCGActacgacgacgacgacgacgacatgGTGAGCGACGGCGAGGACTCCAACATGTCCGTCGCGAGTCTCGGCGACGTCGGCGACACGAGCGACGCGGGCGAGGAGAAGAAGACTCCGATGCCGGCGTCGGGCGGCGGACGGTCGAGACGGAAACCCGCCGCACCGCAGTGGGTCAATCCCGAGTGGCAGGACAAGACCACCGACAAAGAGGTCATCATCAACGGCGTCTGCGTCATGCGATCTGAAGATTACGGCATCGAGGAGAAAGAAGACGAGGAAACGGTTCGTGTGGAGCCGACTCCCGTCACCGAGGATCCTTATGACAGCGACGATTCGGAGGAGCGGCCCAAGTCGGAAGCGGGATCTGTGGCGGAGGAAGCGGGCCTCGAGGAAGAGGAAACGGAAGTTCAGGGAGCGGTGCAAGTTAGACACAGCGGGTATTTGAAGCAGGACAGCGATGCAGCGATAGAAGAGGAAGATCAGGGAAAGGAAACGTCTGAAGAGTGGCAGAAGGAGAATAAGAGGATAAAAGTAGAGGACCATGAAGAAAGATGGGAATATTAA
- Protein Sequence
- MLLETKVFLLMLFPWTNVCCLLRLQICQLVEDVQRLQSSVSKLQENSATQIARLEEQLDHKRQHITRIEQRLDAQRDYDDLKRELAILRSLDFASMGAAVNSADAPAKALDLLLIERSKALQQQHAESNGPKSVSSCSDLPGVTTTTTTTTTTPSLHHLTDTPTPIDHPPPPPPPPLPPPLFPAPLQNVETFGSFLGEEIVANWRRSLERSILSQNHALQANHLQAMPSPTEEASTPHDDAVKEVTSPCTTSSPTSFINTTPTISSPLAGNGDIYNHHLMNGNPKTPEDSNVLCNNNNNHLNNNNMSTPPTPVPGPLSFFRDVDIKSPFRFDDPRSPFRFADEGVMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHISRRVRELLSINNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDENAVMLLKSLIPKKGKDTGIPAFGRDPDNMSEERIAHILNEASHLMKNQVEDSRSNDSKSPSHNQCPSPMGKDGSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMEDSIRGPREHFPSSLLFPHFFGSGGGNVPLGVGREDEIRVALDAYHRELAKLNTCPTRAVMPAGLPGLPGGLPGLLALQQQHNVQMNGVDLSLPKERRDSSASKMCNGDLDDERCKKDPTPSGLEAVADVLRHVGSAFSLVRPKIEPGVGVPTSTTGSSGSSPLGNTILPPALEDFTSSGPASASPLQRMASITNSLISQPSSTPHHSPSQRPLKAVLPPITQQQFDNFNNLNTEDIVKKVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMYLEDDNAVHKLVASQYKIAPEKLMRTGSYAGGPACPVQLPKQNQQQPQQKFPSCNDLPRSDKFENSLLPPSLQLPCPPPVPHHHPQTSPLSSQSAPPHLTHTPHSQEKKPTNQLLHTHQQSAALRALQQHVAPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSHNIDRLQALKNERREANKRRRSHQDNGSDTSSNDTSEFYHSPSPGPPSAKKQRVLFSEEQKEALRLAFALDSYPNVATIEFLGSELALSSRTITNWFHNHRMRLKQQTPHDSTPGSRDGSTGGQPFDPVQFRMLLNQRLLELQKERMGLGAVPLPYPPYFNNNLAALIASRGMLPDMKEQFSGLDLSMGGLKREPDYDDDDDDMVSDGEDSNMSVASLGDVGDTSDAGEEKKTPMPASGGGRSRRKPAAPQWVNPEWQDKTTDKEVIINGVCVMRSEDYGIEEKEDEETVRVEPTPVTEDPYDSDDSEERPKSEAGSVAEEAGLEEEETEVQGAVQVRHSGYLKQDSDAAIEEEDQGKETSEEWQKENKRIKVEDHEERWEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00894641; iTF_00241953; iTF_00242059; iTF_00243039; iTF_00242942;
- 90% Identity
- iTF_00894641;
- 80% Identity
- iTF_00894641;