Lnig001681.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- kn
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010000134.1:1-13339[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 1.7e+03 -1.8 0.1 541 573 26 58 6 65 0.80 2 2 1.7e-34 2.4e-30 106.6 0.0 10 94 213 291 204 291 0.92
Sequence Information
- Coding Sequence
- ATGCTGGAAGGCCCCTCCACAAGTGCCGGCGTCTCGCGGGTTGCCTACCTCCGCCGTCCGCCGCCGGAGCTCGCCACTGATGCTGTACGGCTCCAGTCCACCCCCGCGGCCCGCGCACCCCCCGACACTCATCCCCCCACCACGCCAACACAAACAGATGATAATGCTATGACACCACTGGGTCGGCCTTTAACTGACGTCATCTCTCTCCCATTGGTCGATATACCGTGTTTCAGCAGGGGTTGTTGTCAGTCGGTGGTTCTGTGTCACGAGCGGTGGTCCACCTTCTTCACGCACTCCACATTGAACGAGCACGTGTCAGATATCAGTGAACACTTAACCGTTTCATCGACGCTGTCCTACGACGACTGCACGACGCGGTCCGACGACTTCCCCTCTGTCGAGCGCGGATATACGACGGCTTCCCCGTGGCCGGCGTTGTCCCTGCCGTGTTCGGCGCCAGTTGAACTGGACCCCGTCGCCGCGGCATGGGGGCGTAAGTTGTACCCTCCGCCCGGAGCGGGACCGACGAGAGTGGGCGCCGGGGGGCTGATGTTCGGACTCCATCATCATCAGGATCCCACCGCCGGAGGgttgcatcatcatcatcatcatcatcaaccgCGGGGGCCGGTGACGAGTCTCAAGGAGGAACCTCTGGCGACGACGCAGCTCTCGGCGAGGTCATGGATGCAGCCGACGGTCGTCGATCAGAGCAGTGTCGGGGTTGGACGAGCACATTTCGAAAAACAACCGCCGAGCAATTTACGAAAATCCAATTTCTTCCATTTTGTAATTGCGCTCTACGACCGTGCTGGGCAGCCCGTCGAGATCGAGCGGACCGCGTTCATCGGGTTCATCGAGAAAGACCAG
- Protein Sequence
- MLEGPSTSAGVSRVAYLRRPPPELATDAVRLQSTPAARAPPDTHPPTTPTQTDDNAMTPLGRPLTDVISLPLVDIPCFSRGCCQSVVLCHERWSTFFTHSTLNEHVSDISEHLTVSSTLSYDDCTTRSDDFPSVERGYTTASPWPALSLPCSAPVELDPVAAAWGRKLYPPPGAGPTRVGAGGLMFGLHHHQDPTAGGLHHHHHHHQPRGPVTSLKEEPLATTQLSARSWMQPTVVDQSSVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -