Basic Information

Insect: Leucozona laternaria
Gene Symbol: -
Assembly: GCA_932273905.1
Location: CAKNZR010000271.1:1051056-1055764[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0079 1.4 10.8 0.0 2 23 207 229 206 229 0.95

2 8 0.49 88 5.2 0.9 2 20 822 841 821 845 0.92

3 8 1.3e-06 0.00023 22.7 2.6 1 23 881 903 881 903 0.98

4 8 0.023 4.2 9.3 4.1 1 20 915 934 915 936 0.93

5 8 1.3e-06 0.00023 22.8 2.4 1 23 941 963 941 963 0.98

6 8 0.016 2.9 9.8 3.4 1 23 969 991 969 991 0.99

7 8 0.0014 0.26 13.1 0.3 1 23 997 1020 997 1020 0.96

8 8 0.059 11 8.1 0.4 1 23 1029 1051 1029 1051 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0079	1.4	10.8	0.0	2	23	207	229	206	229	0.95
2	8	0.49	88	5.2	0.9	2	20	822	841	821	845	0.92
3	8	1.3e-06	0.00023	22.7	2.6	1	23	881	903	881	903	0.98
4	8	0.023	4.2	9.3	4.1	1	20	915	934	915	936	0.93
5	8	1.3e-06	0.00023	22.8	2.4	1	23	941	963	941	963	0.98
6	8	0.016	2.9	9.8	3.4	1	23	969	991	969	991	0.99
7	8	0.0014	0.26	13.1	0.3	1	23	997	1020	997	1020	0.96
8	8	0.059	11	8.1	0.4	1	23	1029	1051	1029	1051	0.97

Sequence Information

Coding Sequence: ATGAACGAAAACAACAATAGTTTTTCAAGCTATGATGGTTACTATTGCAATAATAACTTTCAGTTTACAGATTTAACAACACCATTGGATGTGCACTCTTCGAATCATTACTTCAGTTCAATAACAGAAGGGTTTTCATCACCACAACCATTCTTATCTGCATCGTCAGTGGAACCAACACCCCCCGCTCCTCTGATAAATTTACATTCCAATAATCTACTCCCCTTTGTACAAATTCACACCACAAATGCCCAACCAACAAACAATAATTTCGGAAATATTTTCCGCCGACAGCAGAATCATGAAGAAATCAAATCCGAAGAGCCCATCAAGTCAGAACAATCAGATGCTTCGGCAACGATTAGTGCCGCTCAACAACAAAATCCAACCAACAGCACACCACCAAATTGCCATCAGGCTAGTACAGGGCACGTGACACCACCAACTATTCCGACTGCCCAATCACAACAGCCACAGTCTATTCCGCAAATAACTGCTCTGGTGCTAAGGTGCACTCAGTGTCCGTATTTGTGCCTGCAGGCGGAGACTTTAGAAAAGCATAATGGTTCGGTACATTTTAGAAACGAGGAACCATCGGATTATCAGAGTAGAAAAATCACCTGTCCAGGTTGTGATAATATATTCTATGCCAAGGAATCACTGGAGGTTCACCTCATCAGTGACCATTTAATGTGCAAAGAAGAAGCAAAGCAACTGCTTCCAGATCTGTCGGAAGACCAACCAAGAAAAAGCAGAATCTACTTGAAAAATGTCGAATTTTTGCGTGAGCCACAACGACAGCAAGAATCCGTTCTTAGCCTAGACGAACAGGGCTTTTGCAATGCCTTCCAAAACACCAGCGACAATAATTTGATGAATCTTATCTGCGATGAAAATAATGTGATGCCGGAAAATCCTTCAACAGTTGCAGAAACACAATCAGATAAGCAAAAGATTTCTATCAAAAGTGTCGATGTGCTGAGGGAGCCAGCTTTGATGCGAAGAGACGAACAAAATAGTTTCGATTTCCTGCCACCAGCACCAAACAATCAAAGTGATATTCTCTGTTTAGATGATGGGGGCATCAATCGCTATCCTTGCTTTGTTCCACAATCCGATCTAGCAGATATCTGCCCAGAACACCAGCAACACCAAGAAGAACAGCTGCAAGAAAGTCAACCTTCCGGAAAACCCCGTCGACCCAAAATTTACATTAAAAATGTTGATATCCTAAAGGAACCCATATTTCTACCACCAGACAATCTAACGAATGTTTTGAATGTACACGATGATTTACATTTTAATTTGCTGCACACAAATGAAGATGAATTTCAAGGAACCAAGTTCATAGAAGGCATCAATAATGAGTATTCCTTTGACTGTGGTGGTAATAATTTTGTCGACTGCGCTAACTTTCTGCTTCCATCCGAAGATTCAAGCTTTATGCAGCAAGAACTACCGAAGAGTAAAATCTATATAAAAAATGTAGACATTTTGAAGCAACCCCAGTTTCAGGAGCATCCGCGAAGATCGACAAATTTCCTTCACCTCCGTACTGTAGACGAATTGAATCTGATGAATAAAAATGAGGTAGAGAATCTCATTGCTCCGAATCTCGAGCAAAACATGACCAATGCACAGCACTTGGTCACAAATTCATCCGAGAATTCCAAAAACTCTGAAGAGGTTTGTGGCTTTCGAATGATGAATCAGGATTCGAATTCTTTTAACAAACCCACAGATTTTCAGACACAACCGACTATTAGTTGGACAAGCGACTATGTGTTGGATGGGTTGGACGCCATCATTGATTCGAATTCGGGCAGTGAACAGAAGAACCGACACTACGATCTTAATACTCCTCAGATATCTATCATAGATGAGGTCAATGACGTGGCTGCTGATGCGCATGATCCAGAAATCTTGTTCGTTTGTGCTGAGGAGTTAATCAACGACAATCGCGACCAGGAAGATGGTATCAACACTGATCCAAAAGAAAGAGAACAAAGGTCTTTTGAAATCGTTGAGATCATGGATGACCTGGAGCGAGATCAACCCAGTCGGGAGTCGCAGCCAGAACCGGTTGCTTTAAATTCAAAAGAATCAGCAGCAGATGATAAGGAAGAGGATGTGCTAGCACTAGACGAAGATTCGGTAGTAGTGGCTCACGAAAAAGGCAGGATCTATGTTTCGGATAATTTGATGGAAGTCGACAAGGACGGCGTTTGCGAAGAACCAAGTGAAATAGTCGATGATGTTAATACAACCAAACCAAAACCACGTGGACGGCCGTTTGGATCGAATCGAACGGGCATAACAAAACTGCGAAAGATATATGGGAATACACAGTTAGCGGAAACCGGTACGAAATGTAATTTCGAAGGTTGTTCGTTTCGTTTTAAAAAGCCAGATGTCTCAAACTACCACAAACGATGTCATAATACGGAAGGATCCCGTCCCATGGTTTGTCCCGAGTGTAAATCTACAAATTTTTCCAACTGGAACACTCTGCACACACATCTCTGGCGTTCTCACAAAATCGATATGGAACTGCATAGCTGTAAGGAGTGTACTTTCAAAACACCCATTTATTCGAGGCTAGTGAACACTCACAGCAAGATACATTCCGAAGAACGCAACTATAAGTGCGATCAATGTGAAAAAGCGTTCAAAAACAGCAAACAATTGAAGAACCACCGCAGGTGGCATCGAACAATTGCCATAGCGCCACCTCCCGATGTGCACCGGTGCGAAGAATGTGGCTCTGCATTTTCACATTTGAAATCTTTGCGAGAACACTTTTGCAAGGGTGGTGATTTGTTTTGTTGTGAAATATGCGGCAAGACGTTATCTTCAAAGTCATCCTTGAAGCTGCATATGCTGACACATGCATCGGCAAAGAAGTTCAAGTGCAATTCATGTGATTACATGGCAAATGATCATAATGCCTTTCGGAGGCATCGTATGACTCATGACAAGAGCAAAATGTACATTTGCCCACTGTGTGACTACAAGTCGATTCAAAGTGTCGCATTTCAGAAACACATTAAACTGAAGCATCCAGAGTCGGCCGATGCTATTGTGCATACGTGTAAATTTTGTCCATTTGCCACAATCAATATTGGGCTATTAACAGTTCATTTAGCCAAGCACAAGCTAAGAGATGAACACGAAGGACAAAAGGAAAGAACAAAATCAGCAACTAAAATCAATGCTGAATCATCATTAATGACAATGGCTGAAGAATTTTTCTATAATTCCGATAGTAATAATGTTAGTAGTTCGAATTCGATTGCTTCGACTACATCAGCCACAAGTGCAATTCTTCTTACCACTTGCACAACAAATAAAACAGAGCAAGAAAACTACAAGACCATTGAAAGTTCAACTATAGAGACTGATAATAACCAGCAACCTAGAAATAAAATTAAAGTTAAGAGCGATTTAGTATTAACAGATCCGGCGAAATTCTCATCGAATGTTGTGAGCCCATTGTTATTGCATTGTTTTGATGGTGCTGTTAGATGA
Protein Sequence: MNENNNSFSSYDGYYCNNNFQFTDLTTPLDVHSSNHYFSSITEGFSSPQPFLSASSVEPTPPAPLINLHSNNLLPFVQIHTTNAQPTNNNFGNIFRRQQNHEEIKSEEPIKSEQSDASATISAAQQQNPTNSTPPNCHQASTGHVTPPTIPTAQSQQPQSIPQITALVLRCTQCPYLCLQAETLEKHNGSVHFRNEEPSDYQSRKITCPGCDNIFYAKESLEVHLISDHLMCKEEAKQLLPDLSEDQPRKSRIYLKNVEFLREPQRQQESVLSLDEQGFCNAFQNTSDNNLMNLICDENNVMPENPSTVAETQSDKQKISIKSVDVLREPALMRRDEQNSFDFLPPAPNNQSDILCLDDGGINRYPCFVPQSDLADICPEHQQHQEEQLQESQPSGKPRRPKIYIKNVDILKEPIFLPPDNLTNVLNVHDDLHFNLLHTNEDEFQGTKFIEGINNEYSFDCGGNNFVDCANFLLPSEDSSFMQQELPKSKIYIKNVDILKQPQFQEHPRRSTNFLHLRTVDELNLMNKNEVENLIAPNLEQNMTNAQHLVTNSSENSKNSEEVCGFRMMNQDSNSFNKPTDFQTQPTISWTSDYVLDGLDAIIDSNSGSEQKNRHYDLNTPQISIIDEVNDVAADAHDPEILFVCAEELINDNRDQEDGINTDPKEREQRSFEIVEIMDDLERDQPSRESQPEPVALNSKESAADDKEEDVLALDEDSVVVAHEKGRIYVSDNLMEVDKDGVCEEPSEIVDDVNTTKPKPRGRPFGSNRTGITKLRKIYGNTQLAETGTKCNFEGCSFRFKKPDVSNYHKRCHNTEGSRPMVCPECKSTNFSNWNTLHTHLWRSHKIDMELHSCKECTFKTPIYSRLVNTHSKIHSEERNYKCDQCEKAFKNSKQLKNHRRWHRTIAIAPPPDVHRCEECGSAFSHLKSLREHFCKGGDLFCCEICGKTLSSKSSLKLHMLTHASAKKFKCNSCDYMANDHNAFRRHRMTHDKSKMYICPLCDYKSIQSVAFQKHIKLKHPESADAIVHTCKFCPFATINIGLLTVHLAKHKLRDEHEGQKERTKSATKINAESSLMTMAEEFFYNSDSNNVSSSNSIASTTSATSAILLTTCTTNKTEQENYKTIESSTIETDNNQQPRNKIKVKSDLVLTDPAKFSSNVVSPLLLHCFDGAVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00335448;
90% Identity: iTF_00665220;
80% Identity: -