Basic Information

Insect: Leucozona laternaria
Gene Symbol: zfh1
Assembly: GCA_932273905.1
Location: CAKNZR010000121.1:597226-606859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.9e-05 0.0052 18.5 1.6 2 23 74 95 73 95 0.97

2 7 1.2e-05 0.0021 19.7 6.6 1 23 104 126 104 126 0.99

3 7 0.00025 0.044 15.5 1.2 3 21 134 152 132 153 0.94

4 7 0.0014 0.24 13.2 0.7 2 21 405 424 404 425 0.92

5 7 1.9e-05 0.0035 19.0 0.5 1 23 791 813 791 813 0.94

6 7 3.2e-05 0.0057 18.3 7.3 1 23 819 841 819 841 0.98

7 7 0.0021 0.37 12.6 4.3 1 21 847 867 847 868 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.9e-05	0.0052	18.5	1.6	2	23	74	95	73	95	0.97
2	7	1.2e-05	0.0021	19.7	6.6	1	23	104	126	104	126	0.99
3	7	0.00025	0.044	15.5	1.2	3	21	134	152	132	153	0.94
4	7	0.0014	0.24	13.2	0.7	2	21	405	424	404	425	0.92
5	7	1.9e-05	0.0035	19.0	0.5	1	23	791	813	791	813	0.94
6	7	3.2e-05	0.0057	18.3	7.3	1	23	819	841	819	841	0.98
7	7	0.0021	0.37	12.6	4.3	1	21	847	867	847	868	0.96

Sequence Information

Coding Sequence: ATGATGGATAAGAGGAACACATTAGCCGTGATGTACATAGCACATCCAACCAAACCGTTTCTAGTGCTGCTGGCTGCTCGATCAACTAAACTCTCTAGGCATGTACTTGTACATCTAGGTGGTGTATCTATCTCCCTCCGCCAACCGCACAATCACGATGACGGCGATCGTGTCGCTGTCGATCGACCTAAACGAGCGCGCATCTGCAACCACACCTCAAGTTGTAAAATCTGCCACAAAGCATTCGCCAATGTGTATCGCTTACAACGGCACATGATCAGCCATGATGAATCGGCACTGCTGCGCAAATTCAAATGTACTCAATGCGATAAGGCCTTTAAGTTTAAACATCATCTCAAAGAGCATGTACGCATCCATTCCGGCGAAAAACCATTCGGTTGTGATAATTGCGGTAAACGTTTCTCACATTCCGGTTCATTTTCGAGTCACATGACTTCGAAGAAATGCATCAGTATGGGCCTCAAATTGAACAATAACCGAGCGATGTTAAAGAGTTTGGAGAAGAGCGGGATATTAGGTGGCAGTCCGAATGGAAAGCGTCCTGGGGGCGCACAAGCTCCAGTTGGAACGAATCCTATGAATTACTTCCCGCATGGTTTGGGTGTGGGTGGAGTTGGTGGCGATGTGGGTCCGGCGAATCCATCGAATGGAAACAATTCGTTTTACCAAATGCTGCCGAAATATAGTGACTATGGGGCAATGAATGCCGCTTTATTAGCTACATTCCAGAATCCATTTTACAATATGGCCGCACTGAATCCGAATATCCATCCATATAGTATACATCGGTTGCTGGAGCTAACTGCAGCTGGTAACCAAAGACTACAGTCGGATCCGGAAGATCTGATCGAAGAAGTGACAGAGGATGTGGCCGACGAGCCGAAACTTGTGATGGACTTGGATGATTGTGAAAAGGATATCGAAGAAGATCACACTCGTACTTATAATCGCAGTGACGACGAAGATGATGGTGAGGATAGTCGCAATAGTAATAATAGCACGCCACCAAAGCAAACCTATGAAGAGTCGAATGCCGAAGATGAGAAAATGGAGAGAGTTCGGAGTCCTAGTCCGGCGCCGGAAGATCGTCCCCATTCACCGGAAATCAAAGTCGAAGAAGAAGAGGAAGAAGAAGATCAGGAGAAGGCTCCTCAGGAAGAAATTGAGCAGTCTGAACCGGTAATTGAGTTGCGCTGCAGTCGTTGTGATAAACAATTTAACCACCCAACCGAATTGGTCCAACACGAAAAGATGCTTTGTGGGTTGATCAAGCAAGAGCTTGAGCAACAGCAACATCACCACCAACAACAACAACAACAACAACAGCAACAACAACAACAAATGCAACAGCAGTTTCAATCAAATGAATCCGATGCCGGTAATTCGTCTTATCTTCATTCTGGCAGTGAAGAAGAATTAGAGGATCGAGAATCAAAGACCGGCAGTGAAGCGGGTGAGCGGAAGGTTCGTGTTCGAACAGCAATTACAGAAGAACAGCAAGCCGTGCTGAAGCAACACTATGCGATAAATCCACGACCAAGTCGAGAGGAATTCCGAGTGATTGCCCATCAACTGTCATTAGACGCCCGCGTAGTACAAGTGTGGTTCCAAAACAACCGATCTCGCGAAAGAAAGATGAATAATGGTTTCAATGGAATTAGTAAATGCTATCCGCCAATGATGCCCGAACCCATCCAAGCCAATAGCCCACCACCAGCTGTGGTGGATTCAGTTAAACTCCCTAATGGAGAAGATCAACCTCTGGACTTGTCGCTCAAAAAGGAATCTCCTCAACAACCGGCTCATTCCCCGCTCTATGGGAGTGTTCCCATGCAGGTGGACACCAACGAAGCAATCAACCTGAGTCAAAAGCTCTCACCGAGTCCGACATTGTACAAACAACCCTTCTACTATGGTGCTGCCATGCCCAGTCAACGTCCCTCAGACATTCCACTGCTATCACATCACATTCGTCAAACTCCATCGCCAAATGAAGCAATGCCACCGATGCCACGATATCCCACTAACACTCATCCCTACATGATGCCCAATGGCACTGGACCCCGGGGATCAATGGTCCCCATGGAGTGTCTCTTTCAAATGGCTCCTGAATATGCCCGTAGCCATCTAATGGGAGGTATTAAAATGAGCGGAAGCAGTGATCGTGGTACTAGTTTGAGTCCTGGATCGGAGAAACGATCATGGCGTGACGATGAATCGAGAATTTCACATGAAGATGAATACATTGCGGCTGCAGCTGCTGCAGCAGCAGTTTCGAATCTAATGCCACCACATCAAAAGCGACACAAGGTCGAAACACATGGGCATGCTGGTGATCCAGACCTGCCGTTCATTTGTGATCAGTGCGATAAGGCCTTCGCAAAACAGAGCTCGCTGGCGAGACATAAATATGAACATTCTGGTCAACGTCCTTACAAATGCGTCGACTGCCCCAAAGCATTCAAACACAAACACCATCTCACCGAACATAAACGTTTGCACAGTGGTGAAAAACCCTTCCAGTGCTCCAAATGCCTGAAACGTTTCTCACATTCCGGCTCCTATAGCCAGCACATGAACCATCGGTACTCATATTGCAAACCGTACAGGGAATAG
Protein Sequence: MMDKRNTLAVMYIAHPTKPFLVLLAARSTKLSRHVLVHLGGVSISLRQPHNHDDGDRVAVDRPKRARICNHTSSCKICHKAFANVYRLQRHMISHDESALLRKFKCTQCDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKCISMGLKLNNNRAMLKSLEKSGILGGSPNGKRPGGAQAPVGTNPMNYFPHGLGVGGVGGDVGPANPSNGNNSFYQMLPKYSDYGAMNAALLATFQNPFYNMAALNPNIHPYSIHRLLELTAAGNQRLQSDPEDLIEEVTEDVADEPKLVMDLDDCEKDIEEDHTRTYNRSDDEDDGEDSRNSNNSTPPKQTYEESNAEDEKMERVRSPSPAPEDRPHSPEIKVEEEEEEEDQEKAPQEEIEQSEPVIELRCSRCDKQFNHPTELVQHEKMLCGLIKQELEQQQHHHQQQQQQQQQQQQQMQQQFQSNESDAGNSSYLHSGSEEELEDRESKTGSEAGERKVRVRTAITEEQQAVLKQHYAINPRPSREEFRVIAHQLSLDARVVQVWFQNNRSRERKMNNGFNGISKCYPPMMPEPIQANSPPPAVVDSVKLPNGEDQPLDLSLKKESPQQPAHSPLYGSVPMQVDTNEAINLSQKLSPSPTLYKQPFYYGAAMPSQRPSDIPLLSHHIRQTPSPNEAMPPMPRYPTNTHPYMMPNGTGPRGSMVPMECLFQMAPEYARSHLMGGIKMSGSSDRGTSLSPGSEKRSWRDDESRISHEDEYIAAAAAAAAVSNLMPPHQKRHKVETHGHAGDPDLPFICDQCDKAFAKQSSLARHKYEHSGQRPYKCVDCPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223773;
90% Identity: iTF_00334865;
80% Identity: iTF_00893743;