Basic Information

Insect: Leucozona laternaria
Gene Symbol: RREB1
Assembly: GCA_932273905.1
Location: CAKNZR010000539.1:126439-133068[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.035 6.2 8.8 0.8 1 21 239 259 239 261 0.93

2 14 0.00032 0.058 15.2 0.2 1 23 271 293 271 293 0.98

3 14 9.2e-06 0.0017 20.0 5.2 1 23 299 321 299 321 0.98

4 14 0.023 4.2 9.3 5.5 2 22 523 543 523 543 0.95

5 14 0.022 3.9 9.4 0.1 1 20 586 605 586 607 0.93

6 14 0.0086 1.5 10.7 0.1 1 23 755 777 755 777 0.97

7 14 0.00017 0.031 16.0 1.7 1 23 786 808 786 808 0.99

8 14 0.00045 0.08 14.7 2.0 1 23 814 837 814 837 0.97

9 14 0.00092 0.16 13.8 2.1 1 23 1183 1206 1183 1206 0.95

10 14 8.3e-05 0.015 17.0 0.3 2 23 1514 1535 1513 1535 0.97

11 14 0.14 25 6.9 6.3 1 23 1541 1564 1541 1564 0.97

12 14 0.51 92 5.1 6.4 1 23 1661 1683 1661 1684 0.96

13 14 0.081 15 7.6 1.1 3 23 1733 1753 1732 1753 0.91

14 14 0.0013 0.24 13.2 4.8 1 23 1759 1781 1759 1781 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.035	6.2	8.8	0.8	1	21	239	259	239	261	0.93
2	14	0.00032	0.058	15.2	0.2	1	23	271	293	271	293	0.98
3	14	9.2e-06	0.0017	20.0	5.2	1	23	299	321	299	321	0.98
4	14	0.023	4.2	9.3	5.5	2	22	523	543	523	543	0.95
5	14	0.022	3.9	9.4	0.1	1	20	586	605	586	607	0.93
6	14	0.0086	1.5	10.7	0.1	1	23	755	777	755	777	0.97
7	14	0.00017	0.031	16.0	1.7	1	23	786	808	786	808	0.99
8	14	0.00045	0.08	14.7	2.0	1	23	814	837	814	837	0.97
9	14	0.00092	0.16	13.8	2.1	1	23	1183	1206	1183	1206	0.95
10	14	8.3e-05	0.015	17.0	0.3	2	23	1514	1535	1513	1535	0.97
11	14	0.14	25	6.9	6.3	1	23	1541	1564	1541	1564	0.97
12	14	0.51	92	5.1	6.4	1	23	1661	1683	1661	1684	0.96
13	14	0.081	15	7.6	1.1	3	23	1733	1753	1732	1753	0.91
14	14	0.0013	0.24	13.2	4.8	1	23	1759	1781	1759	1781	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACATCGATTAAGAAGGAATTAACTGATATTTCATTACGAAAAATGGATCGACGCCAATCAACAACATCAGATTCATCTATCGAGCCCATGGACTTGGGTCGATCTAATTCGAAAATATCCACAGATATGACAGATCATAGCAGCAGCACAACATTGCCAACATCAACACAAATTAAAGATGCCATTTTATCAGATGCCAATAATAAGTATCGCTATGAGTCCGATGCCGACGAATCCGCCGATGATAGAGATAGAGATCAACAAAGAAGATCCCACAGTCAGACTCATCACTACCATCATCGTCGGCGTGGCAATACGGGGGGAGGACGCGACAAACGCACTGTCCTCATGGAATGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGCTTCAGCAGTAGCAATCATCATAATGCTGTGCCTGATACTGTGATCAATTTGAAATCAAAAACATCGAATAATAATGATTCAACAAAATCAACAACTACAGCTCCAGCAAATCTTACAGCAACAACAAACAACGAATCAGGATTTGTGGATGCTAGCATAAGTCATGTTTTAAATACATCTGGTTCGTCGGCGACATCATCCACATCATCATCGTCGCCGACTTCATCATCATCCGCCTCGCCATCTGCAAGTAATGTAGCGTCGGCCATATCGAGCCCAGAGTCGGGCATGGGTGAACGTGACGATATGAAGTACCTTTGCCCAATTTGTGAAGTGGTGTCGGCGACGCCGCATGAATTCACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTCTTTCATCGGCCTCTTCATTGGATCGGCATGTTTTGGTGCACACTGGTGAGCGGCCCTTTAACTGCAAGTATTGCCAATTGACATTCACTACAAATGGTAATATGCACCGTCACATGCGAACCCACAAACAACACCAGCAACATTATCATCGCAATTCAAATGGTACAAAAGGTGCAAATGGTAGTACAGCAAGCTTATTGCCAGCCCTACCACTAACTGATCCATCGCCAGCAACTCAAACATCAGCCGCTGTTAGTGATTTACCTTCGAAAACGGCGACAAACATAGGCAATGGAGCTGTGTGTAATAGCAATGGTGACACAATTGCGGGTGGAGGAGATGGTTGTGGTGGCGAAAGCTATGACAGTGATGGTGGTTGCTCAACAGATTCATCGAGTGGCATCAGCCAAAGTTCCAATAACAACAATAACAGCAATACAAACAACAACAACATAAGCAATTTTAAACGCAAGAGCACCGACAGCCTGGATGACTTGGCCATTATGAAACGACGCGTGAAGACCACAATTAACAACAACAACATTATCGATAACACGATTCATGCCATCCCAGAGAAGAGTACAATCGAATTAACAGGTGTCATCGAAGCTGTTAAACAACAACAACAACAACAGAAGCTCTTTTGCCCGGTGTGCAATCGTGATGATTTCGGGGGGATGCTTGCATTGGGAGATCACATGGACAGCGATCATTCTGACATTCCAGCCAAATGTCGTCATTGTGATGTAGTTTTTAGAACCCACAAACAGCTCAATGTACATCGATGTACCAGTAAATTTCAAATTACACAAGGTTTTAAGGACCTGACATTTGTTGACTGCCCCAGCGAGAAATTCCCGCTAATTGCAAAGACTCTGTGCGAGCAGAGTACAAGGGCGCCAATTGGAGGTGAAAAGTTCGAGTGTTCGAAGTGTTACCGAGCATTTCCATCTGCAAGTTCAGTTGAAATTCACGAGAAAGACTGTACGGCATCAGGTTTGAATCTCTTCGTAGACTCTCCCAATCGAAAGCAAAGAGCTTACAGCGAAAGCTCAGCAAATGCAGATGATGATGACAATCGACGAGAGGAGTTCTTTAATCGGCTGTACTTAACAAACAAATCCACAGCACAAAGCATGACAAGTTTATCAGTTTCCTCACCATCTCTGTCCGATGTTAAATCCTCCGAACTTGAAAAGACACCTGTTAAGAACTCCCAATTAGAACAGTTCCAGGACACCAAGGAACTTGCTGATATTCAATCGATCCTCAATATAACTTCGTCGTCGTCAACATGCAATTTTCTGCGCAACTTTGAAAATTCAGTAAATGCGCCAATTAGTAATTATGGTGCCGAAAATGGAGAAGAAGAAGCCCAAGATGCGTTCACTTCGGAGTTTCGAAAAATGAAACTGCGTGGGGAATTTCCATGCAAGCTCTGTACAGCTGTGTTTCCCAATTTGCGAGCACTCAAAGGCCATAACAGAATCCATCTTAGTGCTGCTGGTCCAGGCCCTTACCGATGCAATATGTGCACATATTCCATTCATGATAAAGCAGCTCTTGTCCGACACATGCGCACACACAACGGCGATAGACCTTACGAGTGTGCCATCTGTAATTATGCATTCACAACAAAGGCCAATTGTGAAAGGCACTTACGAAACCGTCACGCGAAGACCACACGCGACGATGTAAAGCGTGCCATTATTTATCATCCATCAGAAGACTCAAACTGCGACGATGCCATGAAAAAGTTGCACATGTTTTCATCACCCGAATTCGATCAAGACGATATGGAGCAACATCATCCGCCCAAAGATCGATCAACTCCGGTTTCTCATCTTAAGGAAATGCTTCAAGCCGAATCTAAGCCAATGAAAATTCAAGTGAAGAGCCTTGAAAAGTTGATTGATAAGCCATCGTTCAATCAACCTGATGAACTCGAAAAGGAGCATGAGCCAATAATACCCGAACAAGAGAAAGAGATAAGCAGACCTATTGATCTCAGCATGGATGCATTGGATTTGAGCAAAAAATCTGTGAAAACTGAAAAAATCGAAGAGAAAAGACCTCAAACTCCTCCACCACCAGCGCCACGTATAAATCCAAGCCGTCCACTGACCGACGAGCCGAATATCGACATGCGATTACTTGAGAAAAACCAACAGCTCCTGCTGGCTCAGCAGAGACTTCTTAATGAAGCAATGCCAAAAATGGATCCCGCACACTATTTCCAATTGTCGCAGCTGTACAATAACTTGGTGTTCCAGCCGCTTAGTCCGTTTTTACTGCAAAATTCGTTTCTTTCAAATAACATCAGTGATTTGAATAAATTTGCTCCCATGGTGAATCCCCTATATAGTGGAGCACCTGTAGAGAGCCCGATCTCACGCGCTGAAAAACAAAATCATCAAAGTTCACTACCAAAACCCGTCCAAGACGAGGTCCATTCATCAATGAAGCAAGTTAATTCCCAAACTCAATCACCAGTGCCTGCTCAAAGTCAGCCATTACAACGGAATCCAACACCGTCTCTATCGCAAATGCCAGCTTTGCCAAGAAGTCATCAGCATCTTATGAGTGGAACTCATCCTTCGGGAATGCTGCCTTCTTCTTTGCCCAGTTCAGGACCTGTGAAAATGGTCATCAAAAACGGAGTTCTAATGCCCAAACAAAAACAACGACGCTACCGCACAGAACGTCCATTTGCATGTGAACATTGCTCTGCACGTTTCACCCTCCGTTCCAACATGGAACGCCATATCAAACAACAGCATCCTCAATACTGGGCTCAACGACAACGCAGTGGCCATCAAATAATGCGTGGGCGTGCCAACAGTTCCTCGATACACTCTCACTTACAATCAGCTCACTCGCCCCTTGAATCGCCACATCCAATTGGTCCTAGTGGCATGATGACAAATCCCCTGAGTGCCATTTCAGATCAAGTTAAATATGCTATACTTGCCCAACAACTGAAAGCCCGCAAGGAAACAGATATCCTGCAACAGGCATTATCACAAGGATCCAGCAGTGTGCTCACGCCGAACCCCACAACAGGTATGAACACTATTCGCCAATCGCTCAGTGCATCGTCGAATACCAACAATGGTAGCACTGAAGATGATGATCCAAAACTAGTGATCGACGAAGACGACGACGAGCAAGACGAAGAAGAAGAAGATGACGAAGAAGAGGATTGCGAAGATCGGAAGCCAGAAAACTTGACCAAATTTCAAGACTTCCCAGACCAAACAACAAATGAAGCAGCAAAGAAAGTTGCCGAATCCATCCTTGAGCAAGCAATGAAAGCTGGAAGCACCAAGACTTCATACTCCAACGATGAAGATCATGATCAAGCAGCTGGTAAGGACTTCGGCCTCAAGCTGTCGAAAAATATGATTGCTCAAGCGGAGTCAGTTGGCAAATTTCTCAAAGAGGTCGCTAGCTCTCCATTTAAAGATGATTCAAACGATTTGGTATCAGTCTCCAGGTTAGTTGATAACGCAACGAATTCTTTGTCCTTTAATCCCTACTTTCGACCCAGTGATGTTGTCAATCAAATGGAACAAAGTGACGAGGAGGGACTTGTCGCATCAGGCAGTGCATCGGAGAGTAATAACTCTGGTCCAGAAGACATGGTGAGCTCACAAGAGCCGAAGAAAAAATCCGCATACAGTTCAGCACCTAATCGTGTCTCCTGTCCATATTGCCAGCGAATGTTCCCATGGTCCAGTTCATTGCGAAGACACATTCTCACCCATACCGGCCAAAAACCATTCAAATGCTCACATTGCCCGCTGCTTTTCACAACCAAAAGCAATTGCGACCGCCATCTGTTGCGCAAACATGGAAACGTTGAATCAGCTGTTTCATTATATGTTCCAATTGAGGACGTAAATGAGCCATTGCCAGTGCCCAAATCTGTCGAGGAAATCGAGCTACAACAACAACAGCTTCTTCTTCAACAAAAAAAACAAAAACGGTTAGAAGAACTAAAAGAGATGGAGAAAATCCAACCACCACTTCAAAAGCCATTCGAAGGGAATCAGGAGCCGACAACGAGCATAAATTCAACGCCCACAAGCTCAACAAACCCCATTCCATCCTCTCCAATGATTTCGTCTTCAGAGTTGCCATTCAAGTGTCATCTGTGTGACAGTTCGTTTGCGGATCGATTCCAATGCCTTGATCACATTAAAATCCATCATGCTCAAGAATTTTCACTTCTTCTGTCCAAAGGCGCTATTGATAATGACGCCGATATTAACATGCAAGTCCAGTCCACCGAAGATGATGAAAGACGCGACGAAAGCCGAGGCAAATATCCAGACTACACCAACCGTAAGGTAATTTGCGCTTTCTGCATGCGGCGTTTCTGGTCCACTGAGGACTTGCGTCGCCACATGCGAACACATTCTGGCGAAAGACCATTTCAATGCGATATATGCCTCCGTAAATTCACCCTGAAGCATAGTATGCTGCGACACATGAAAAAACATAGCGGTGGCAGCCATTCCAGCAACGGAGTCACCAATGCCGGCAACAGCGGGTCTGACGTCTCCGACGATGAACAACCACCATCTAGTGTTATGCTTGCCAATGCCTTGCGTTCTCACAAAATCCAAGAACTTTTCTCAAAAGTCAATAGTCGTATCTCGGGTGAGCACAAAGAGAACATCGAAGAGCACAACAACCAGTCTGATCTTATTGGCAACTTGCTGGGCATCCACGATCAAGGCATTCTTAACAAACTGCTCTCGTCCTCGTCGGCTGATGAAGCGGCCAAGTTTCTTGGCGTTGAAAAATAA
Protein Sequence: MLKTSIKKELTDISLRKMDRRQSTTSDSSIEPMDLGRSNSKISTDMTDHSSSTTLPTSTQIKDAILSDANNKYRYESDADESADDRDRDQQRRSHSQTHHYHHRRRGNTGGGRDKRTVLMECTDSPHSLRKKFRFSSSNHHNAVPDTVINLKSKTSNNNDSTKSTTTAPANLTATTNNESGFVDASISHVLNTSGSSATSSTSSSSPTSSSSASPSASNVASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGSTASLLPALPLTDPSPATQTSAAVSDLPSKTATNIGNGAVCNSNGDTIAGGGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNNNISNFKRKSTDSLDDLAIMKRRVKTTINNNNIIDNTIHAIPEKSTIELTGVIEAVKQQQQQQKLFCPVCNRDDFGGMLALGDHMDSDHSDIPAKCRHCDVVFRTHKQLNVHRCTSKFQITQGFKDLTFVDCPSEKFPLIAKTLCEQSTRAPIGGEKFECSKCYRAFPSASSVEIHEKDCTASGLNLFVDSPNRKQRAYSESSANADDDDNRREEFFNRLYLTNKSTAQSMTSLSVSSPSLSDVKSSELEKTPVKNSQLEQFQDTKELADIQSILNITSSSSTCNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDELEKEHEPIIPEQEKEISRPIDLSMDALDLSKKSVKTEKIEEKRPQTPPPPAPRINPSRPLTDEPNIDMRLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLSPFLLQNSFLSNNISDLNKFAPMVNPLYSGAPVESPISRAEKQNHQSSLPKPVQDEVHSSMKQVNSQTQSPVPAQSQPLQRNPTPSLSQMPALPRSHQHLMSGTHPSGMLPSSLPSSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHQIMRGRANSSSIHSHLQSAHSPLESPHPIGPSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTPNPTTGMNTIRQSLSASSNTNNGSTEDDDPKLVIDEDDDEQDEEEEDDEEEDCEDRKPENLTKFQDFPDQTTNEAAKKVAESILEQAMKAGSTKTSYSNDEDHDQAAGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDDSNDLVSVSRLVDNATNSLSFNPYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQLLLQQKKQKRLEELKEMEKIQPPLQKPFEGNQEPTTSINSTPTSSTNPIPSSPMISSSELPFKCHLCDSSFADRFQCLDHIKIHHAQEFSLLLSKGAIDNDADINMQVQSTEDDERRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGVTNAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVNSRISGEHKENIEEHNNQSDLIGNLLGIHDQGILNKLLSSSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -