Llat028225.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucozona laternaria
Gene Symbol
Znf296
Assembly
GCA_932273905.1
Location
CAKNZR010000706.1:367144-376448[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1.9 3.4e+02 3.3 0.4 1 14 6 19 6 21 0.83
2 26 0.73 1.3e+02 4.6 0.6 8 23 195 211 186 211 0.82
3 26 0.0025 0.44 12.4 2.7 1 23 217 239 217 239 0.95
4 26 4.4 7.9e+02 2.2 0.2 2 10 245 253 244 255 0.85
5 26 2.3 4.1e+02 3.1 0.3 2 13 274 285 274 297 0.74
6 26 0.001 0.18 13.6 4.8 1 23 303 325 303 325 0.98
7 26 0.0033 0.59 12.0 0.1 1 21 331 351 331 355 0.91
8 26 0.00016 0.029 16.1 1.3 2 23 382 404 381 404 0.91
9 26 0.028 5 9.1 1.6 1 23 428 450 428 450 0.98
10 26 0.013 2.3 10.2 4.4 1 23 456 479 456 479 0.96
11 26 5.2e-05 0.0093 17.7 0.1 1 23 485 508 485 508 0.95
12 26 5.6e-06 0.001 20.7 0.4 1 23 514 536 514 536 0.99
13 26 0.041 7.3 8.6 1.6 1 17 542 558 542 559 0.90
14 26 1.3 2.4e+02 3.8 0.1 2 23 788 812 787 812 0.78
15 26 7.7e-05 0.014 17.1 3.0 1 23 818 840 818 840 0.98
16 26 7.9 1.4e+03 1.4 0.1 3 10 847 854 845 864 0.88
17 26 0.11 20 7.2 0.4 2 13 875 886 875 898 0.75
18 26 4.3e-05 0.0076 17.9 6.8 1 23 904 926 904 926 0.98
19 26 1.7e-06 0.0003 22.4 0.5 1 23 932 954 932 954 0.99
20 26 0.00043 0.076 14.8 4.7 2 23 960 981 959 981 0.97
21 26 0.092 17 7.5 1.1 3 23 990 1011 989 1011 0.90
22 26 0.00014 0.026 16.3 2.1 1 23 1036 1058 1036 1058 0.99
23 26 2.7e-05 0.0049 18.6 1.8 1 23 1064 1087 1064 1087 0.96
24 26 7.4e-06 0.0013 20.3 0.3 1 23 1093 1116 1093 1116 0.93
25 26 1.4e-05 0.0024 19.5 1.2 1 23 1122 1144 1122 1144 0.98
26 26 0.00012 0.021 16.6 1.5 1 23 1150 1172 1150 1172 0.97

Sequence Information

Coding Sequence
ATGGGCGATGCAGAACATACCTGCCGAACTTGTGGTAAAAGTTCTGAACAAGAAGACAACACCGACCTGTTTCCTTTGTTCACATCCACCGAATATAAAAATGAGCTTAAAATGATTTTATCAGAATTCGAAATATGGAATTTAAATATATCAGAAAATGACGGCTTACCGCAAAAAATATGCTTAACATGCTTCGATAGTTTTTGTCAAATTCACAACTTCCGCATTATGTGTGAAGAGGCTCAAACGAATTTTGGAGAATTATGTACTGGTTTGGATATAATAATCAAAATGGAACCACAATTCAATGGAGATATTGATAGCGATATCCCGGAGGACTTTGAAGGCGAACAAACTATAACAATACAAGAACACTATCGATTTCCTCGTCATATACGTTCAAAATTAGCAACACCCCTTGCCGAATCAACACAAAGATTAGAAAAGATAAACTCTGGCAATGAAGACGGACAAAGTATGGACATAAATGACAAAGAAAAGGCTCGACAAGAGGAGATTGATGAAATGAATGCAGAAGTTCCCGCATTCAAACAGCATCGATGTGAATTTTGCATGGATGTAGTGAGTTTCGATGATCCAGACCACTTAAATGATCATTACAATGTCTTACACAGCACCGATTTACCTTATTTATGTCCCAAATGTGATAAATGCTTTGAAAGTAAAGTAAAGAGAAACATTCATGCCAAATCGCATTATCGTATATTGGTTGAGTGTGATATTTGTGGAAAAAAAGTAAGAGGTGGTAAGCCAATGATGGCTCAGCACAATGAGTTGCATCACATTGAGATTGACCGTGAATGCCTTACATGTGGCAAGATATTTCCGAAAGCAACTCTGAAAACATTCAACTATCACATGAGTTGGCATGATGATGCTAAGTTGCACAAATGCAAGTATTGTGAAAAGAAATTCGTCCAAATAACGCATTTAGTAGTGCACGAGAAATCACATACGGGAGCCTGCGTCTATCAGTGTTATGAGTGTGGAATTGGATTTGCGAATGAAACTCTACTTAACGAACACAATAAAAACCTAGAACACAAAACTGTGAATGTTCCAGATGAAACTATGGAAACACCTGAGGCAGTTCCAAAAAGTAACTCGAATAAAAGATCAACCCGTTGCGAAATTTGTGACAAATCTTTTCGATCATTAATAAATCTACGTTTGCACAGTTACAAAAAACATGGAGCTAAACCTACACCAGGAGTCAAAGAAATAATAAAGCAGAGACAACATCTCGTGATCATTAAGCCATTTAAATGCAGCAAATGTCCAGAAGCGTTTCTCATGCACACGCAGTTAGTGATCCATTTAAAAAAACACGACGAGAACAAGCCTTTCAAATGCCCCACATGCTCAAAGAGTTTCAAAAAGGATAAATATTTAAAATGTCACATAGATACTGTGCACTTGAAGAAAAAAGAACATGTTTGCTCGATTTGTGGGTGGGCATTTGTATATAAGCAAAGTCTGGAAGAACACATTGCTGTAAAGCACAGCAACACAAAAGATTTTAAATGCGAAGTTTGTGAAAAAGCATTTGCATTTGAGAAGGCATTGAAGAATCATATGCTAACACATAAAGAAGAAAAGCCGTTTGCGTGTACAGTGTGCAGCAAGAGCTTCCGACAATCGTGTGCCCTTAAAGATATACCGAATTTGCAATCAGTGAATATAAAGAACAAGGCTTGCTATTGGAACTATATTGCCAAGCTAGCTGGCATAAAAATCGATTTGATAATAGTTCTTATTATACTTTATTACAATATGTTAAGGAAGTCGCATTTGGAGGCCCAGAAAATGAGTATTGCAGAAAGAACGTGCAGAACCTGTGGCAAGGCATCAGAGTTGACTGACGAATCACTTCTCTTTCCACTCTTTAACCCAGTCGCTTATGAGTCTGAACTAAAAATTATATTAGAAGAATTTGAGATATGGAATTTAAATATATCCAAAAACGATGGACTGCCACAAAAAATTTGCCTAACATGTTTTGATAGTTTTTGCCAAATTCATAATTTCCGTATATTGTGTATCGAAACACAAATGAATTTTGGAGAAATGTGTACAGGCTTGGATATAATTATTCAAGATAAAATAACCGACGAAGCTTATGATTTTTCTGAAAATTTTGATGGGGAAGAGTCGGTAATTGTTCAAGAGCACTACACATTTCCGGGTGATGAACGTTTGAAAACATCTTTTTTCACTATTTCACCAGAGTTGCCTGAAAATATAAAAAAGTCTATTGATTCTGACGAAGAAGATACAACAAAACAAGAGCTTAACGAATCAGAGGAAACAAACACTGTTATTCCCGAATTCAAAGAATATAGATGTGAATTCTGCATGGAAATTGTAAGTTTCGATGACCCAGACCAGCTCAATGAGCATTACAATGAACTGCATTTAACAAATTTACCTTATACGTGTCCAAAATGTGACAAGTGCTTTGATACAAAAGCAAAGCGAAACAGTCATGCACGAATTCATTACCGAATAGTTATTGATTGTGAAAAATGTGGCAAAAAGGTGAGAGGTGGCAAAAGAATGTTGATGCAGCATAATGAATACAATCACGTTGACAAAGACCGTGAATGCCCGACCTGTGGGAAAAAATTTAAAATGACCTCTTTGAAAAGACTCAATTACCACATGAGTTGGCATGATGATTCGAAGCTGCACAAATGCAAATATTGCGATAAAAAATTCATTCAAACCACACATTTAACAGTCCACGAAAGAACTCATACTGGAGAATGTCCATTTAAATGCAATGAATGTGGATTGGCATTTAAAAACTCAAATCTTCTGAGCAACCATATTCAAATGCATGGAAAAAAAGAAATGCAATGTACCCAGTGTCCTAAAAAATTTTTCCATCTCCATGCTTTGAAATTGCATATGAAAATTCATAACCCAGATAGGAAACATCCCCATTGTGAGATTTGTAATATAACATATGGATCTGCAATGAATTTGCGGTTGCACAATTACAAAAAGCACGATGGACCTGCAACACCGTCAATACTTAACATATTAAAAAAACGAGAAATAAAGCATCCGGTTATTAAACCATATAAATGTACTCAGTGCCCGCAGAGTTTTGTGTTGCACACGCAGTTAGTAAAACATTTAAAAGTTCACGATGAGGACAGGCCGTTCTCCTGCAAAATCTGTTTAAAGGCTTTCAAACGATTGGCACATTTGAAACTACACATGGACTCACTGCACTTAAACAAAAAACCACATAAGTGTTCTATATGTGGGTGGGCTTTCCCACAGAGAAATAATTTAAAAGAACACATTGCTGCTAAACATGCCAGCAATAGGGACTTCAAGTGTGATATTTGCCCAAAGGAGTTTGCAACATTAAAATCTCTAAAAACGCACAAGTTAAAACATTCAAAGAAAAAACCATTTGTTTGTACAGTGTGTACTAAGAGATTCAAACAATTGTTTGTGCTTAAAACTCACATGAATGGTCATCTAAGGAAGAACGAAGCCGACATCGAAGGTGGTGATATAACGGATATTGTAGTTGAGGAAGAATTAGAAGATGTATAA
Protein Sequence
MGDAEHTCRTCGKSSEQEDNTDLFPLFTSTEYKNELKMILSEFEIWNLNISENDGLPQKICLTCFDSFCQIHNFRIMCEEAQTNFGELCTGLDIIIKMEPQFNGDIDSDIPEDFEGEQTITIQEHYRFPRHIRSKLATPLAESTQRLEKINSGNEDGQSMDINDKEKARQEEIDEMNAEVPAFKQHRCEFCMDVVSFDDPDHLNDHYNVLHSTDLPYLCPKCDKCFESKVKRNIHAKSHYRILVECDICGKKVRGGKPMMAQHNELHHIEIDRECLTCGKIFPKATLKTFNYHMSWHDDAKLHKCKYCEKKFVQITHLVVHEKSHTGACVYQCYECGIGFANETLLNEHNKNLEHKTVNVPDETMETPEAVPKSNSNKRSTRCEICDKSFRSLINLRLHSYKKHGAKPTPGVKEIIKQRQHLVIIKPFKCSKCPEAFLMHTQLVIHLKKHDENKPFKCPTCSKSFKKDKYLKCHIDTVHLKKKEHVCSICGWAFVYKQSLEEHIAVKHSNTKDFKCEVCEKAFAFEKALKNHMLTHKEEKPFACTVCSKSFRQSCALKDIPNLQSVNIKNKACYWNYIAKLAGIKIDLIIVLIILYYNMLRKSHLEAQKMSIAERTCRTCGKASELTDESLLFPLFNPVAYESELKIILEEFEIWNLNISKNDGLPQKICLTCFDSFCQIHNFRILCIETQMNFGEMCTGLDIIIQDKITDEAYDFSENFDGEESVIVQEHYTFPGDERLKTSFFTISPELPENIKKSIDSDEEDTTKQELNESEETNTVIPEFKEYRCEFCMEIVSFDDPDQLNEHYNELHLTNLPYTCPKCDKCFDTKAKRNSHARIHYRIVIDCEKCGKKVRGGKRMLMQHNEYNHVDKDRECPTCGKKFKMTSLKRLNYHMSWHDDSKLHKCKYCDKKFIQTTHLTVHERTHTGECPFKCNECGLAFKNSNLLSNHIQMHGKKEMQCTQCPKKFFHLHALKLHMKIHNPDRKHPHCEICNITYGSAMNLRLHNYKKHDGPATPSILNILKKREIKHPVIKPYKCTQCPQSFVLHTQLVKHLKVHDEDRPFSCKICLKAFKRLAHLKLHMDSLHLNKKPHKCSICGWAFPQRNNLKEHIAAKHASNRDFKCDICPKEFATLKSLKTHKLKHSKKKPFVCTVCTKRFKQLFVLKTHMNGHLRKNEADIEGGDITDIVVEEELEDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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