Llat003608.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucozona laternaria
Gene Symbol
Sall1
Assembly
GCA_932273905.1
Location
CAKNZR010000066.1:929795-953727[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.00025 0.045 15.5 2.2 1 23 245 267 245 267 0.99
2 28 0.00052 0.094 14.5 0.4 1 23 272 295 272 295 0.95
3 28 9.5e-07 0.00017 23.1 1.2 1 23 301 323 301 323 0.99
4 28 0.0016 0.29 13.0 0.7 1 20 468 487 468 488 0.95
5 28 2.7e-05 0.0048 18.6 0.5 2 23 497 519 496 519 0.91
6 28 0.001 0.19 13.6 2.6 1 23 680 702 680 702 0.98
7 28 7.1e-05 0.013 17.2 1.3 1 23 708 731 708 731 0.92
8 28 0.00077 0.14 14.0 3.6 1 20 737 756 737 758 0.95
9 28 3.3e-06 0.00059 21.5 1.0 2 23 907 928 906 928 0.97
10 28 4.8e-05 0.0085 17.8 0.8 1 23 934 957 934 957 0.94
11 28 0.00015 0.026 16.3 1.0 1 23 963 985 963 985 0.99
12 28 2.6 4.6e+02 2.9 0.8 2 23 1039 1060 1038 1060 0.92
13 28 1.3e-05 0.0024 19.5 1.8 1 23 1090 1112 1090 1112 0.99
14 28 0.0021 0.38 12.6 3.3 1 23 1118 1141 1118 1141 0.94
15 28 5.1e-06 0.00092 20.8 1.1 2 23 1232 1253 1232 1253 0.98
16 28 6.1e-06 0.0011 20.6 4.3 1 23 1259 1282 1259 1282 0.96
17 28 0.0095 1.7 10.6 0.4 1 23 1288 1310 1288 1310 0.99
18 28 1.4e-05 0.0025 19.5 2.0 1 23 1388 1410 1388 1410 0.98
19 28 7.9e-05 0.014 17.1 3.9 1 23 1417 1440 1417 1440 0.96
20 28 0.0018 0.33 12.8 1.8 1 23 1446 1468 1446 1468 0.99
21 28 4 7.2e+02 2.3 0.0 2 22 1539 1558 1538 1558 0.90
22 28 7.8e-05 0.014 17.1 0.5 2 23 1604 1625 1603 1625 0.97
23 28 3e-05 0.0053 18.5 0.6 1 23 1631 1654 1631 1654 0.96
24 28 2.9e-05 0.0051 18.5 2.5 1 23 1660 1682 1660 1682 0.98
25 28 2.2 3.9e+02 3.1 1.6 2 23 1762 1783 1761 1783 0.92
26 28 2.3e-05 0.0041 18.8 0.8 2 23 1829 1850 1828 1850 0.97
27 28 5.6e-05 0.01 17.6 4.4 1 23 1856 1879 1856 1879 0.95
28 28 0.011 2 10.3 1.8 1 23 1885 1907 1885 1907 0.98

Sequence Information

Coding Sequence
ATGCCCGTGGGATTCTCTAAGGCATGCCGAACATGCTTAACACTCGATGGGACACTTATTTCAATCTACGATTCAATAAGCTACGATGGAAGGGGACGTGTTACCGATATGATTAAAGACATTACAAAAATCAAACCCATTAAATCCGATGGCCTCCCTGAGCTTGTTTGTCAGACGTGCCTAAATGAAATTAATCGATGTCATTCATTTAAAGTAAAATGCCTTAATTCCGATAGTACATTGAGGAAACTCTTTGCTACTGAAGAAGAGCTTGAAGCGCCAATACAACAACAGGTGCTTAGTGAGGAAAAAGAATATAAACCTATCATTGAGAATCTTATAAGGCTTCATGGTCCTGATGAACTAGAGCTTGAGTATGAACCACCAGTCAAAATTAAAACTGAAAAAGACCAAGACGACCAATCGTTTGGATACTTTGTTATTACTTCAGTTTGTAGCCAAATTGACCCAACAAACGGATCTGGCGATGAAGAAACAGTTAAAACATTTCAGACGCCGCAAGCATACATCAAAGAAGAAATCGATTATGAGATTGATTCGTACAATACCTCTTCAACGAGACGTTTAACGTATAGCGATGTGTGTGCAAGTGACCAGTCACAGTGTTTTGATAATATCACTTTGGAATTAGCTTGTCCCGAAGTTAAACTGGAACCTGAAGAGCCAGTACAATTAGAACCTCCAGTAATAAATTCACCAACTAAGCCGAGTTTTAAATGTTCCAAGTGTGGTAAAGAATTTTTATACATATCGCGTCTCAAAAAGCACATGCGAATTCACAATGAAAAACCTTTTGTCTGCTCAACCTGTTCCAAAGGTTTCAAATTATCCGTTCAACTAAGGAACCACATCGATATAACTCACCGAAACATTAAACCTTTCAAGTGTGAAGAATGTCCTCGAACTTTTTCTTTTCCATCAAAACTTAAAGAGCACCTCAGATCGCACAAGGGAAGTAAATACTATAAAAGTAATTATTCTCTATCTCGCACTATCATTGACAAAAAGAATAACGAAGAGTCAACTCAACTTGCCAAATCTATTACTGGTGTTGAATATACAGACGAACAGAAGTCAGAACCGAAATGTGATGAAAATACTAAGGCTACCAGCACCAATCTAGATGAAAGCAATAAAGAACAGCCTGTTGCGTGGATGAATGAGCGTTCTACAAGACGTTCGGCTCGAATTCATAGAGAAGAAATGAAAACTCCAGACAGTGGAAAACATGAAATGCATCCTAATAATAGCGCCGCTAGCGAAGCATGTGGAACTAAAATAAAAACAAGGTTGTCTGAGAAGTTAACACCGATTGATTATTCCTTTGACGGCCAAGATCAAAACCCTGATGATAAAAATAGTCCCGAAGGGGCACGTCAGTATAATTGTCCTCATTGCACCAAGGTATTTAAATACGTGTCACGCCTTAACGAACACCTGGTATGTCACAGCGATGCCAGACCATTCGATTGTATTAATTGTGGCAAATTTTTCAAAACGCCTGGCCAACTAGCGCGGCACATCAAAACAAGTCATAAATTATCTTCGTTTAGAGGTCGTAGGAAACCATTTACTAAACGACGCGGCTTGAAACGAAAAAATTTAAATAAGAACTTTCTTCGCAATACAGTGGAGCCAGTTAGTAAAAGTCTCGAGCATACCGACGAAAATGAAAGCAAAGACGACCAAACTAATGTGCCCAACACTGATCTACCACATGGGCATATATTACTTGCAAATGAAAGCCTAGATTGCCAAATGAATGAGATCGGCAATGATCAATCAGAAAATGTAAATAAAGATAAGCACATGAATGAAACCAATAATAGTTTACCATTAAAGGAAACAAAAGTGACAAAAAACAAAACTAAATCCAATCAATTCGATTCCCCATCTAAGCGGTCGAAACAAACAATTAAAGAAAAAGCATCCGAAAATCCCGAAAATATGCAAAACCCAGATATCCTTCAGGAGTCTAATGATCCAGAGAATATAAGTACTGATGACCCACGAACTTATCATTGTGAGCAATGTGATGAAACATTTCGTGTTTCTGCACGATTTTATAAGCACATGCGTGGTCATGGCGTTGAAAGGCCATTCCTTTGTTCTTTATGTGGCAAGGGCTTTAAAAATTGTGGAAATCTTAAAAGTCACATTGTGATAACCCATAAGAAATTAAAGCCCTTTAAGTGCAATGATTGTAAACGTGCATTTTCGTGCAAATCAAATCTTAACAAACATTTAACATCGCGCATTTGGACAAATAGTTGTACTAAAGAGTTTAATGTCCGTCGTGGTGGTCCAAAGAAGAAAATTAAAAATAAAAAGCTGTTAAATATTAAATATGAAAGTAAAGAAGACACAAGCAAACAAAAACAGAAAATACCTTTTAATGAAGGCAAAAATGAAAACGAAATTATAAATGATGTCAAAGGGAGACAAAAGCAGAAATGTCCAACTGAGGAAATAGTTGCAAAATTAAACACTACACCAGTTCACGTCCAAGAGCCAGATGTTGTTGAGGCTAAGAAAGATACAACTTACTTTGCGGAACCAGAGTCCGTTGAAGTGAGTCCCGATCTCTCCACACCACAAGCAGAACTAGAAGAAAACGAATTAAAACAAACAAATCTTGAGTCGAAACCAAATCAGTCCGAGGAAAAGAGTGCCACTAAGAAGCCCAAAAATCGACTTGAGTGTCCTCAATGCAAAAAAGTGTTTGTGTACCGGTCGTACCTTAAAAAACATTTGCAAAGTCACAGCGACGAAAGACCTTTTATCTGTACAATTTGTGATAAAGCTTTCAAATATAAAGTCAGCCTTAAGTCTCACAATATGATAACGCATGCTAAAATAAAACCGTATAAATGTGATAAATGCCCTCAAGCTTTTGTCAATGAATACACCTACAGAGTACATCGGAATTCACACAACAAGGCGCTTAAAGCAATTAAAAGAAAAACAAAGACTAAGCGGCGTCGTGCACTTGCAAAGCCTTATATTGCTGAGTCAACAAGTACTACTGTTGATGAAAGCGTTACCAATCATAAAGCAGAAGTGGGGGCTGGTGAATTAAAGAATGACATGACATCCTGTTCAATATGTTCTATTTCAATGCAGTCTGAAAATTTAATAGAACATATGCACCAATACCATAGTAACACCGATCCAACGTGTGCTCCTGTTAATCCTGCTAATCATTCCAATCAAGCGGAGAATCAAAGTTCCGAATCAACAAACTCGTTTCAGTGTCCTCAATGTCAAAAAGTATTTTTGTTTGCTTCGTACCTTAAAAAACACATGCGTAGTCACAATGATGAAAGGCCACATATCTGTTCAACTTGCGATAAAGCTTTCAAAGATCATTGGAGGCTAAGGTCTCATATAAAGGCAAAGCATAACTCGTACTCAAAAAAAAATAGTCACAGAAAAAAAATAAGGAATTTAAATCACGAGAAACCTTTGAGTACAACTTTTGGCAATGCGGATGGGCAAGATCAAAGTGCTAAAGTTGATGAAACAAGTGAAATCTCAAATATTCCACAAGATCTCATGAATCTCAATCTCAATGAAGAAAATTCACCCGATAAAATAGGTAATTTGGATAATCAGACTGTCGCTACAATTTCAAAGGAGGCAGAAGGAGCAAAAGTCGAAATTGTGAAACCTCAATGCACCCAATGCGACAGAGTATTTCAGTTTGCCTCACAGCTTGAGACACACATGCGAACACATACTGGTGAAAGGCCTTTTGTCTGCACAACATGTCACAAGACCTTTACACAAAATGGTCATCTTAAGAATCACATCCTGATAAATCATAAAAAAATAATGCCCTTCCAATGCAGTGTTTGCTTGCGGGGTTTTGCAAGTGGTTTTAATATGAGAGCTCATGAGAAAACCCACTTCAATGAACGCTGCAAAAAAGTCAAATCTAAAATTAAAAGTAGTGATAAATTACGAAAAGAGTATGATGAACATTCTACAGTGGAGACAAGCGGAGAAACTGACCGCAAAGCTGAAGATGATCTTCAAGATCAAGTTATTCAGGATTTTGAAAAACTCGAGCTACATCCACTTTTTGGATCGATGTCTTCAAATCAAGAAGAAAATACAAACAACGAACAGAATAGTTTCTTTCCGTGTCCCCAATGCAAAAAGACATTTGTGTTCCATTCGGATCTCGATGAGCACATGAAAACTCACAGCGCGAATGCAAGGCCATTTAATTGCACAATTTGTTACAAAACTTTCAAACAAGAAGCTCACCTGAAGAATCACACCCAAATGAGCCACACAAAAACAAGGAATTACAAGTGTAGTGAGTGCGATCGGGTGTTCCTTACATTCTATATTCTCAATAAACATATGAGATCACACAAAGGAAAGAAAAACCGCAGTAAGGCAAAATCTAAGCGTGGTCATAAAAAAAGAGTTAAGTACCAACAAAAAACTGAATACTCTGAGCAGTTTTTTACCAGCATTGGAGAAGATGAAACAAATGAACAAACTGTTTCCAATGATACTGTCAACATTTCAAAAGAACACATCCAACCAGAAACCGCTACGCCGAGAAAAAATATTCAAATTACGTGTGCACTATGCTCTGTTTCAGTTGATGCAGATAGTTTAACTGAACACATGAAAAAGTGTCTGAGCATATCACAATCGACCAGCATGCAATTAAAATCAGAACCCTTAGAAGATCAACAACAAATAGGGCATCCACTTTTCGAAACACTTTCAAATCAGGATGAACAACAAATTCACACTGGCGTTGCAAAGGAGTGTTTGGAATGTAATAAAGAGTTTTCTAGTTATTCGCGGTTAGCTGATCATATGCGGATTCATAAAGTTGAAAGACCTTTCATTTGTACAGCGTGTGGCAAAGGCTTTAAAAAAAATGCACATCTTAAGTCACATATAATGATAGTTCACAAAAGAATACTGCCATACAAATGTATCGAATGTTCTCGGTCCTTTTCAAGCAAGTATAATCTTCAAATGCATTTGAAAACTCATATTGCAAAAGGTAATCTGAAAAAAGGAAGTTCCAAACGGCGAGTTATTGTAAAAAAGAGTTATTACAAAGACCCACCTTATCATGCCAAACCAATTCATAGTGAAATTGCACATCAAACCACATCAAGAGATAGCCAGCAAAAAGAAATCAAAGAGGATACAATAAATTATACAATTCAAAATCAAATGCAACAACGTGAAATACAATATTCTTATGGTAGAAATGAGAACAAAATAAGGTGTACATTGTGCTTTGTTTCAGTACATACAGAAAATTTATCAAAACACATGCAAGAATTTCACAATTTACCCGAATCTTTAACGTGCATGGCAATTAAGAAGGAGCCTTTAGAGGAATCAGAACAATTGGCACATAGACCTTTGGAAACTGAGTCAAATCAGATCGAAACATCGAATATCGATACACCACGCCGTCTACAATGTCCGACATGCGATAAAGAATTCATTCACTTGTCGCGGCTTAATGAACACATGCGAGCCCATAGCGATGAAAGACCATTCATCTGCTTGGTTTGTGGCAAGACTTTCAAACGACATGGTCATCTTACGACTCACATTGCCATATGTCACAAAAAAGCGAAGCCATTTAAATGCAAGGAATGCCACGAATCGTTTCTAAGTAGCTTGGACTTAGATGAACATTTACAAACACATATTAACGAACATCTTCCTGCGGGTTTTCTTGTTGATACAAATTTACAAAATGAAATCAACTTAGAGCCACCCCAGAACGATGAGCCTCTCCCTCCATGTAATATAGATGCCGAACCCATGGGAGAATGCACAGCTGAAGAGACACACCAGTGTACCTTTTGTCCTACAGGTTTGTTCAGCGAGGCTATTCGGAACAGTTTAGAACAGTTTCGAACAGAAAAGTACAACTTTTTGCTGTTCAATGAGGAATTTTCTGTTATAAACTGTTCTGGTTTGCTGTTCAATGAGGCTGTCTAG
Protein Sequence
MPVGFSKACRTCLTLDGTLISIYDSISYDGRGRVTDMIKDITKIKPIKSDGLPELVCQTCLNEINRCHSFKVKCLNSDSTLRKLFATEEELEAPIQQQVLSEEKEYKPIIENLIRLHGPDELELEYEPPVKIKTEKDQDDQSFGYFVITSVCSQIDPTNGSGDEETVKTFQTPQAYIKEEIDYEIDSYNTSSTRRLTYSDVCASDQSQCFDNITLELACPEVKLEPEEPVQLEPPVINSPTKPSFKCSKCGKEFLYISRLKKHMRIHNEKPFVCSTCSKGFKLSVQLRNHIDITHRNIKPFKCEECPRTFSFPSKLKEHLRSHKGSKYYKSNYSLSRTIIDKKNNEESTQLAKSITGVEYTDEQKSEPKCDENTKATSTNLDESNKEQPVAWMNERSTRRSARIHREEMKTPDSGKHEMHPNNSAASEACGTKIKTRLSEKLTPIDYSFDGQDQNPDDKNSPEGARQYNCPHCTKVFKYVSRLNEHLVCHSDARPFDCINCGKFFKTPGQLARHIKTSHKLSSFRGRRKPFTKRRGLKRKNLNKNFLRNTVEPVSKSLEHTDENESKDDQTNVPNTDLPHGHILLANESLDCQMNEIGNDQSENVNKDKHMNETNNSLPLKETKVTKNKTKSNQFDSPSKRSKQTIKEKASENPENMQNPDILQESNDPENISTDDPRTYHCEQCDETFRVSARFYKHMRGHGVERPFLCSLCGKGFKNCGNLKSHIVITHKKLKPFKCNDCKRAFSCKSNLNKHLTSRIWTNSCTKEFNVRRGGPKKKIKNKKLLNIKYESKEDTSKQKQKIPFNEGKNENEIINDVKGRQKQKCPTEEIVAKLNTTPVHVQEPDVVEAKKDTTYFAEPESVEVSPDLSTPQAELEENELKQTNLESKPNQSEEKSATKKPKNRLECPQCKKVFVYRSYLKKHLQSHSDERPFICTICDKAFKYKVSLKSHNMITHAKIKPYKCDKCPQAFVNEYTYRVHRNSHNKALKAIKRKTKTKRRRALAKPYIAESTSTTVDESVTNHKAEVGAGELKNDMTSCSICSISMQSENLIEHMHQYHSNTDPTCAPVNPANHSNQAENQSSESTNSFQCPQCQKVFLFASYLKKHMRSHNDERPHICSTCDKAFKDHWRLRSHIKAKHNSYSKKNSHRKKIRNLNHEKPLSTTFGNADGQDQSAKVDETSEISNIPQDLMNLNLNEENSPDKIGNLDNQTVATISKEAEGAKVEIVKPQCTQCDRVFQFASQLETHMRTHTGERPFVCTTCHKTFTQNGHLKNHILINHKKIMPFQCSVCLRGFASGFNMRAHEKTHFNERCKKVKSKIKSSDKLRKEYDEHSTVETSGETDRKAEDDLQDQVIQDFEKLELHPLFGSMSSNQEENTNNEQNSFFPCPQCKKTFVFHSDLDEHMKTHSANARPFNCTICYKTFKQEAHLKNHTQMSHTKTRNYKCSECDRVFLTFYILNKHMRSHKGKKNRSKAKSKRGHKKRVKYQQKTEYSEQFFTSIGEDETNEQTVSNDTVNISKEHIQPETATPRKNIQITCALCSVSVDADSLTEHMKKCLSISQSTSMQLKSEPLEDQQQIGHPLFETLSNQDEQQIHTGVAKECLECNKEFSSYSRLADHMRIHKVERPFICTACGKGFKKNAHLKSHIMIVHKRILPYKCIECSRSFSSKYNLQMHLKTHIAKGNLKKGSSKRRVIVKKSYYKDPPYHAKPIHSEIAHQTTSRDSQQKEIKEDTINYTIQNQMQQREIQYSYGRNENKIRCTLCFVSVHTENLSKHMQEFHNLPESLTCMAIKKEPLEESEQLAHRPLETESNQIETSNIDTPRRLQCPTCDKEFIHLSRLNEHMRAHSDERPFICLVCGKTFKRHGHLTTHIAICHKKAKPFKCKECHESFLSSLDLDEHLQTHINEHLPAGFLVDTNLQNEINLEPPQNDEPLPPCNIDAEPMGECTAEETHQCTFCPTGLFSEAIRNSLEQFRTEKYNFLLFNEEFSVINCSGLLFNEAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-