Llat041213.1
Basic Information
- Insect
- Leucozona laternaria
- Gene Symbol
- -
- Assembly
- GCA_932273905.1
- Location
- CAKNZR010001525.1:12427-13802[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-08 2e-05 25.5 0.0 4 36 23 56 20 62 0.88 2 2 2.2 2.1e+03 -0.2 0.0 24 32 252 260 251 269 0.79
Sequence Information
- Coding Sequence
- ATGACCCGGGCAAATAAGAAGCAAGCTAAGGACAAAAAAAAGCGGGTCATTCCATATAATGACAAAGATTTAGAACAAGCCTTATTTGAAATCCGTGAAAATAAACTGCCAATCAGAGCAGCGGCAAGAAGATTTAAGATTCCAAGGACGACTCTTCAGGACCGAGTTGACAACAGAACCGCAGATAACATTGGGAAATTTGGTCCCTGCCCTGTCGAAAGTCGGATTATAAAAAGCACTTTCAACAAAGACAGTTTTTGTGATGTGTTAGACGAGCTCCTGAATTACAAGGATAGGACGACAATCATACGAAAGGCTTTCGAAAAATGTGGACTTTTTCCATTCGATCCAAATGCCGTTGACTACTCGAAATGCATTAAAAATGTGTTAGAAGATTTAAATGCTAGCAAAAGTGTTTCCGATCTTGGTGGCAATGTTGGCAGCGGTTCAAATGTTGGTGATCCTGGTGGTAAATCTGGTGATGGTCCTGACGTTAGTTCTGGTGGCGATGGGGATTCTGGGGGCAATCTTGGAGCAGATTCTGGTTGTGTGTCTGTTCGCGATCCTGAGAATGATGTTGGTTATTTGGATTTTGATGCCGCATTGTGGATGTTGGTGGTGTTAATGTTAAAGATATTTCACATGCAAGTTTTTTTAGAAGCCCAAAGAGTAATACTTCACCTAAAAGATGATCTCCTAAGTAAAAATATCGACCATAAAGTTGTGCTTGACGTTTTTCGCCAGGCTAAAGAAAACATTTTTGGCGTTTCTCAGAGTACCGAAGTTATTAAAGGGATATACGAAGTTACCTGCGACGGCACATTGTTAAGAGTACCTGAACCCTATGGAGACAGTGTTCAAGAAGCTTGCTTACCAGATAATAGTCCACATGATGATTGGGAACAAATTACAGATACTATGGAGCTGGAAATACAAAATGATAAAAGTTTTTCATCCGAGATGAATGATACTTCTTCCCAGATTATTGAGAAAAATACACCAACCACAATTCAACCGCACACCTCAAAAAGCGTCGAAAACCCTTCAAAAAGCCCATCTGTTTTTGAAAAGTATTTAAAATATCCGAAACCAATACAAAACTCCGTCCGAAGATTTTAA
- Protein Sequence
- MTRANKKQAKDKKKRVIPYNDKDLEQALFEIRENKLPIRAAARRFKIPRTTLQDRVDNRTADNIGKFGPCPVESRIIKSTFNKDSFCDVLDELLNYKDRTTIIRKAFEKCGLFPFDPNAVDYSKCIKNVLEDLNASKSVSDLGGNVGSGSNVGDPGGKSGDGPDVSSGGDGDSGGNLGADSGCVSVRDPENDVGYLDFDAALWMLVVLMLKIFHMQVFLEAQRVILHLKDDLLSKNIDHKVVLDVFRQAKENIFGVSQSTEVIKGIYEVTCDGTLLRVPEPYGDSVQEACLPDNSPHDDWEQITDTMELEIQNDKSFSSEMNDTSSQIIEKNTPTTIQPHTSKSVENPSKSPSVFEKYLKYPKPIQNSVRRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -